RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
HNRNPC-226ENST00000556628 PLEKHH2Q8IVE3 1493 aa12.23□□□□□ -0.45
HNRNPC-226ENST00000556628 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
HNRNPC-226ENST00000556628 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
HNRNPC-226ENST00000556628 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
HNRNPC-226ENST00000556628 SYCP2Q9BX26 1530 aa12.21□□□□□ -0.45
HNRNPC-226ENST00000556628 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.45
HNRNPC-226ENST00000556628 LOC105371045A0A1W2PR82 267 aa12.21□□□□□ -0.45
HNRNPC-226ENST00000556628 ESF1Q9H501 851 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-226ENST00000556628 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-226ENST00000556628 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-226ENST00000556628 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.465e-7■■■■□ 19.9
HNRNPC-226ENST00000556628 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-226ENST00000556628 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
HNRNPC-226ENST00000556628 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
HNRNPC-226ENST00000556628 AGLP35573 1532 aa12.18□□□□□ -0.46
HNRNPC-226ENST00000556628 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-226ENST00000556628 LMTK3Q96Q04 1460 aa12.18□□□□□ -0.46
HNRNPC-226ENST00000556628 VPS8Q8N3P4 1428 aa12.17□□□□□ -0.46
HNRNPC-226ENST00000556628 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
HNRNPC-226ENST00000556628 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
HNRNPC-226ENST00000556628 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-226ENST00000556628 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-226ENST00000556628 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
HNRNPC-226ENST00000556628 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
HNRNPC-226ENST00000556628 C3P01024 1663 aa12.13□□□□□ -0.47
HNRNPC-226ENST00000556628 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
HNRNPC-226ENST00000556628 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-226ENST00000556628 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
HNRNPC-226ENST00000556628 HSPA2P54652 639 aa12.12□□□□□ -0.47
HNRNPC-226ENST00000556628 A2MP01023 1474 aa12.12□□□□□ -0.47
HNRNPC-226ENST00000556628 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
HNRNPC-226ENST00000556628 SETD1BQ9UPS6 1966 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-226ENST00000556628 LRRC9Q6ZRR7 1453 aa12.11□□□□□ -0.47
HNRNPC-226ENST00000556628 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
HNRNPC-226ENST00000556628 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-226ENST00000556628 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
HNRNPC-226ENST00000556628 CLCN6P51797 869 aa12.1□□□□□ -0.47
HNRNPC-226ENST00000556628 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
HNRNPC-226ENST00000556628 RTEL1-TNFRSF6BF6WH68 1400 aa12.1□□□□□ -0.47
HNRNPC-226ENST00000556628 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
HNRNPC-226ENST00000556628 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
HNRNPC-226ENST00000556628 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
HNRNPC-226ENST00000556628 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
HNRNPC-226ENST00000556628 GGT6Q6P531 493 aa12.08□□□□□ -0.48
HNRNPC-226ENST00000556628 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-226ENST00000556628 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
HNRNPC-226ENST00000556628 TSPY4P0CV99 314 aa12.07□□□□□ -0.48
HNRNPC-226ENST00000556628 TSPY10P0CW01 314 aa12.07□□□□□ -0.48
HNRNPC-226ENST00000556628 LHX8Q68G74 356 aa12.07□□□□□ -0.48
HNRNPC-226ENST00000556628 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
HNRNPC-226ENST00000556628 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
HNRNPC-226ENST00000556628 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-226ENST00000556628 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-226ENST00000556628 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
HNRNPC-226ENST00000556628 NPATQ14207 1427 aa12.03□□□□□ -0.48
HNRNPC-226ENST00000556628 FBXO41Q8TF61 875 aa12.03□□□□□ -0.48
HNRNPC-226ENST00000556628 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
HNRNPC-226ENST00000556628 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
HNRNPC-226ENST00000556628 KIF3BO15066 747 aa12.02□□□□□ -0.49
HNRNPC-226ENST00000556628 STRCQ7RTU9 1775 aa12□□□□□ -0.49
HNRNPC-226ENST00000556628 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
HNRNPC-226ENST00000556628 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
HNRNPC-226ENST00000556628 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-226ENST00000556628 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
HNRNPC-226ENST00000556628 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
HNRNPC-226ENST00000556628 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
HNRNPC-226ENST00000556628 WASHC2CQ9Y4E1 1318 aa11.98□□□□□ -0.49
HNRNPC-226ENST00000556628 FKBP8Q14318 412 aa11.98□□□□□ -0.49
HNRNPC-226ENST00000556628 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
HNRNPC-226ENST00000556628 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
HNRNPC-226ENST00000556628 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-226ENST00000556628 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
HNRNPC-226ENST00000556628 PTPN23Q9H3S7 1636 aa11.97□□□□□ -0.49
HNRNPC-226ENST00000556628 PTPRTO14522 1441 aa11.96□□□□□ -0.49
HNRNPC-226ENST00000556628 CERKQ8TCT0 537 aa11.96□□□□□ -0.49
HNRNPC-226ENST00000556628 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
HNRNPC-226ENST00000556628 EIF2AK4Q9P2K8 1649 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-226ENST00000556628 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-226ENST00000556628 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
HNRNPC-226ENST00000556628 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
HNRNPC-226ENST00000556628 ZC3H13Q5T200 1668 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-226ENST00000556628 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-226ENST00000556628 DUOX2Q9NRD8 1548 aa11.93□□□□□ -0.5
HNRNPC-226ENST00000556628 PZPP20742 1482 aa11.93□□□□□ -0.5
HNRNPC-226ENST00000556628 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
HNRNPC-226ENST00000556628 TNRQ92752 1358 aa11.92□□□□□ -0.5
HNRNPC-226ENST00000556628 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
HNRNPC-226ENST00000556628 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
HNRNPC-226ENST00000556628 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
HNRNPC-226ENST00000556628 TCOF1Q13428 1488 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-226ENST00000556628 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-226ENST00000556628 PKD2Q13563 968 aa11.91□□□□□ -0.5
HNRNPC-226ENST00000556628 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
HNRNPC-226ENST00000556628 ABCC5O15440 1437 aa11.9□□□□□ -0.5
HNRNPC-226ENST00000556628 DAPK1P53355 1430 aa11.9□□□□□ -0.5
HNRNPC-226ENST00000556628 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-226ENST00000556628 KIF15Q9NS87 1388 aa11.9□□□□□ -0.5
HNRNPC-226ENST00000556628 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-226ENST00000556628 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms