RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
LINC01550-206ENST00000556462 FRMPD1Q5SYB0 1578 aa15.74■□□□□ 0.11
LINC01550-206ENST00000556462 FAM135AQ9P2D6 1515 aa15.74■□□□□ 0.11
LINC01550-206ENST00000556462 A2MP01023 1474 aa15.73■□□□□ 0.11
LINC01550-206ENST00000556462 KIF3BO15066 747 aa15.72■□□□□ 0.11
LINC01550-206ENST00000556462 COL17A1Q9UMD9 1497 aaPredicted RBP15.72■□□□□ 0.11
LINC01550-206ENST00000556462 ABCA6Q8N139 1617 aa15.7■□□□□ 0.1
LINC01550-206ENST00000556462 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
LINC01550-206ENST00000556462 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
LINC01550-206ENST00000556462 IQGAP3Q86VI3 1631 aa15.7■□□□□ 0.1
LINC01550-206ENST00000556462 EIF2AK4Q9P2K8 1649 aaKnown RBP15.69■□□□□ 0.1
LINC01550-206ENST00000556462 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
LINC01550-206ENST00000556462 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
LINC01550-206ENST00000556462 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
LINC01550-206ENST00000556462 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
LINC01550-206ENST00000556462 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
LINC01550-206ENST00000556462 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
LINC01550-206ENST00000556462 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
LINC01550-206ENST00000556462 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
LINC01550-206ENST00000556462 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
LINC01550-206ENST00000556462 KANK1Q14678 1352 aa15.63■□□□□ 0.09
LINC01550-206ENST00000556462 PLA2R1Q13018 1463 aa15.63■□□□□ 0.09
LINC01550-206ENST00000556462 BCORL1Q5H9F3 1711 aa15.62■□□□□ 0.09
LINC01550-206ENST00000556462 ATP10AO60312 1499 aa15.62■□□□□ 0.09
LINC01550-206ENST00000556462 RNF17Q9BXT8 1623 aaKnown RBP15.62■□□□□ 0.09
LINC01550-206ENST00000556462 GGT6Q6P531 493 aa15.62■□□□□ 0.09
LINC01550-206ENST00000556462 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
LINC01550-206ENST00000556462 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.08
LINC01550-206ENST00000556462 TET3O43151 1660 aa15.58■□□□□ 0.08
LINC01550-206ENST00000556462 E9PCH4 1651 aa15.57■□□□□ 0.08
LINC01550-206ENST00000556462 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
LINC01550-206ENST00000556462 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
LINC01550-206ENST00000556462 PTPRTO14522 1441 aa15.56■□□□□ 0.08
LINC01550-206ENST00000556462 WASHC2CQ9Y4E1 1318 aa15.55■□□□□ 0.08
LINC01550-206ENST00000556462 AGLP35573 1532 aa15.55■□□□□ 0.08
LINC01550-206ENST00000556462 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
LINC01550-206ENST00000556462 EFCAB6Q5THR3 1501 aa15.54■□□□□ 0.08
LINC01550-206ENST00000556462 ARHGEF40Q8TER5 1519 aa15.54■□□□□ 0.08
LINC01550-206ENST00000556462 ABCC3O15438 1527 aa15.53■□□□□ 0.08
LINC01550-206ENST00000556462 CEP152O94986 1710 aa15.52■□□□□ 0.07
LINC01550-206ENST00000556462 SIGLEC1Q9BZZ2 1709 aa15.51■□□□□ 0.07
LINC01550-206ENST00000556462 NPATQ14207 1427 aa15.51■□□□□ 0.07
LINC01550-206ENST00000556462 TRPM2O94759 1503 aa15.5■□□□□ 0.07
LINC01550-206ENST00000556462 NBPF8Q3BBV2 869 aa15.5■□□□□ 0.07
LINC01550-206ENST00000556462 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
LINC01550-206ENST00000556462 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
LINC01550-206ENST00000556462 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
LINC01550-206ENST00000556462 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
LINC01550-206ENST00000556462 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
LINC01550-206ENST00000556462 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.06
LINC01550-206ENST00000556462 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
LINC01550-206ENST00000556462 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
LINC01550-206ENST00000556462 CLTCL1P53675 1640 aa15.45■□□□□ 0.06
LINC01550-206ENST00000556462 MLECQ14165 292 aa15.44■□□□□ 0.06
LINC01550-206ENST00000556462 NOS1P29475 1434 aa15.44■□□□□ 0.06
LINC01550-206ENST00000556462 UHRF1BP1Q6BDS2 1440 aa15.44■□□□□ 0.06
LINC01550-206ENST00000556462 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
LINC01550-206ENST00000556462 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
LINC01550-206ENST00000556462 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
LINC01550-206ENST00000556462 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
LINC01550-206ENST00000556462 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
LINC01550-206ENST00000556462 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
LINC01550-206ENST00000556462 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
LINC01550-206ENST00000556462 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
LINC01550-206ENST00000556462 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
LINC01550-206ENST00000556462 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
LINC01550-206ENST00000556462 SYNMO15061 1565 aa15.37■□□□□ 0.05
LINC01550-206ENST00000556462 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
LINC01550-206ENST00000556462 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
LINC01550-206ENST00000556462 IDI1Q13907 227 aa15.36■□□□□ 0.05
LINC01550-206ENST00000556462 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
LINC01550-206ENST00000556462 SLC52A1Q9NWF4 448 aa15.36■□□□□ 0.05
LINC01550-206ENST00000556462 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
LINC01550-206ENST00000556462 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
LINC01550-206ENST00000556462 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01550-206ENST00000556462 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
LINC01550-206ENST00000556462 PREX1Q8TCU6 1659 aa15.34■□□□□ 0.05
LINC01550-206ENST00000556462 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
LINC01550-206ENST00000556462 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
LINC01550-206ENST00000556462 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
LINC01550-206ENST00000556462 KIF1BO60333 1816 aa15.33■□□□□ 0.05
LINC01550-206ENST00000556462 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
LINC01550-206ENST00000556462 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
LINC01550-206ENST00000556462 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
LINC01550-206ENST00000556462 MROH2AA6NES4 1674 aa15.3■□□□□ 0.04
LINC01550-206ENST00000556462 SPATA31D1Q6ZQQ2 1576 aa15.3■□□□□ 0.04
LINC01550-206ENST00000556462 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
LINC01550-206ENST00000556462 TRPM1Q7Z4N2 1603 aa15.29■□□□□ 0.04
LINC01550-206ENST00000556462 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
LINC01550-206ENST00000556462 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
LINC01550-206ENST00000556462 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
LINC01550-206ENST00000556462 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
LINC01550-206ENST00000556462 MYOM2P54296 1465 aa15.28■□□□□ 0.04
LINC01550-206ENST00000556462 USP47Q96K76 1375 aa15.27■□□□□ 0.04
LINC01550-206ENST00000556462 MADDQ8WXG6 1647 aa15.27■□□□□ 0.03
LINC01550-206ENST00000556462 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
LINC01550-206ENST00000556462 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
LINC01550-206ENST00000556462 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
LINC01550-206ENST00000556462 CEBPAP49715 358 aaPredicted RBP15.24■□□□□ 0.03
LINC01550-206ENST00000556462 C11orf95C9JLR9 678 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms