RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
SRP54-210ENST00000556380 REREQ9P2R6 1566 aa14.94□□□□□ -0.02
SRP54-210ENST00000556380 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
SRP54-210ENST00000556380 ATP7AQ04656 1500 aa14.93□□□□□ -0.02
SRP54-210ENST00000556380 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
SRP54-210ENST00000556380 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
SRP54-210ENST00000556380 ABCC5O15440 1437 aa14.92□□□□□ -0.02
SRP54-210ENST00000556380 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
SRP54-210ENST00000556380 AGLP35573 1532 aa14.92□□□□□ -0.02
SRP54-210ENST00000556380 ADAMTSL3P82987 1691 aa14.91□□□□□ -0.02
SRP54-210ENST00000556380 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
SRP54-210ENST00000556380 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
SRP54-210ENST00000556380 A2MP01023 1474 aa14.89□□□□□ -0.03
SRP54-210ENST00000556380 DHX29Q7Z478 1369 aaKnown RBP14.88□□□□□ -0.03
SRP54-210ENST00000556380 MLECQ14165 292 aa14.88□□□□□ -0.03
SRP54-210ENST00000556380 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
SRP54-210ENST00000556380 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
SRP54-210ENST00000556380 DAPK1P53355 1430 aa14.86□□□□□ -0.03
SRP54-210ENST00000556380 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
SRP54-210ENST00000556380 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
SRP54-210ENST00000556380 PTPRMP28827 1452 aa14.84□□□□□ -0.03
SRP54-210ENST00000556380 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
SRP54-210ENST00000556380 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
SRP54-210ENST00000556380 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
SRP54-210ENST00000556380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
SRP54-210ENST00000556380 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
SRP54-210ENST00000556380 ADGBQ8N7X0 1667 aa14.82□□□□□ -0.04
SRP54-210ENST00000556380 PTPRKQ15262 1439 aa14.82□□□□□ -0.04
SRP54-210ENST00000556380 CHIC2Q9UKJ5 165 aa14.81□□□□□ -0.04
SRP54-210ENST00000556380 NCOA1Q15788 1441 aa14.81□□□□□ -0.04
SRP54-210ENST00000556380 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
SRP54-210ENST00000556380 KIF3BO15066 747 aa14.8□□□□□ -0.04
SRP54-210ENST00000556380 RRP7BPQ9NSQ0 103 aa14.8□□□□□ -0.04
SRP54-210ENST00000556380 KIF15Q9NS87 1388 aa14.79□□□□□ -0.04
SRP54-210ENST00000556380 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
SRP54-210ENST00000556380 GGT6Q6P531 493 aa14.78□□□□□ -0.04
SRP54-210ENST00000556380 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.04
SRP54-210ENST00000556380 ANKRD30AQ9BXX3 1397 aa14.77□□□□□ -0.04
SRP54-210ENST00000556380 RIMS1Q86UR5 1692 aaKnown RBP14.77□□□□□ -0.05
SRP54-210ENST00000556380 DUOX2Q9NRD8 1548 aa14.76□□□□□ -0.05
SRP54-210ENST00000556380 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
SRP54-210ENST00000556380 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
SRP54-210ENST00000556380 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
SRP54-210ENST00000556380 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
SRP54-210ENST00000556380 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
SRP54-210ENST00000556380 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
SRP54-210ENST00000556380 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
SRP54-210ENST00000556380 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
SRP54-210ENST00000556380 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
SRP54-210ENST00000556380 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
SRP54-210ENST00000556380 ITGAEP38570 1179 aa14.71□□□□□ -0.05
SRP54-210ENST00000556380 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
SRP54-210ENST00000556380 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
SRP54-210ENST00000556380 WASHC2CQ9Y4E1 1318 aa14.69□□□□□ -0.06
SRP54-210ENST00000556380 MROH1Q8NDA8 1641 aa14.69□□□□□ -0.06
SRP54-210ENST00000556380 ANKRD50Q9ULJ7 1429 aa14.68□□□□□ -0.06
SRP54-210ENST00000556380 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
SRP54-210ENST00000556380 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
SRP54-210ENST00000556380 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
SRP54-210ENST00000556380 C3P01024 1663 aa14.67□□□□□ -0.06
SRP54-210ENST00000556380 MROH2AA6NES4 1674 aa14.66□□□□□ -0.06
SRP54-210ENST00000556380 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
SRP54-210ENST00000556380 ABCC3O15438 1527 aa14.66□□□□□ -0.06
SRP54-210ENST00000556380 NPATQ14207 1427 aa14.66□□□□□ -0.06
SRP54-210ENST00000556380 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
SRP54-210ENST00000556380 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
SRP54-210ENST00000556380 SETD1BQ9UPS6 1966 aaKnown RBP14.64□□□□□ -0.07
SRP54-210ENST00000556380 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
SRP54-210ENST00000556380 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
SRP54-210ENST00000556380 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
SRP54-210ENST00000556380 VWDEQ8N2E2 1590 aa14.63□□□□□ -0.07
SRP54-210ENST00000556380 PZPP20742 1482 aa14.62□□□□□ -0.07
SRP54-210ENST00000556380 NAIPQ13075 1403 aa14.61□□□□□ -0.07
SRP54-210ENST00000556380 ARHGAP31Q2M1Z3 1444 aa14.6□□□□□ -0.07
SRP54-210ENST00000556380 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
SRP54-210ENST00000556380 KANK1Q14678 1352 aa14.6□□□□□ -0.07
SRP54-210ENST00000556380 HFM1A2PYH4 1435 aa14.58□□□□□ -0.07
SRP54-210ENST00000556380 HSPA2P54652 639 aa14.58□□□□□ -0.08
SRP54-210ENST00000556380 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
SRP54-210ENST00000556380 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
SRP54-210ENST00000556380 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.08
SRP54-210ENST00000556380 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.08
SRP54-210ENST00000556380 TNRQ92752 1358 aa14.57□□□□□ -0.08
SRP54-210ENST00000556380 UNC13BO14795 1591 aa14.56□□□□□ -0.08
SRP54-210ENST00000556380 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
SRP54-210ENST00000556380 NUP155O75694 1391 aa14.55□□□□□ -0.08
SRP54-210ENST00000556380 ERVK-7P63135 1459 aa14.55□□□□□ -0.08
SRP54-210ENST00000556380 CEP152O94986 1710 aa14.55□□□□□ -0.08
SRP54-210ENST00000556380 SPATA31D1Q6ZQQ2 1576 aa14.54□□□□□ -0.08
SRP54-210ENST00000556380 CAMSAP1Q5T5Y3 1602 aa14.54□□□□□ -0.08
SRP54-210ENST00000556380 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
SRP54-210ENST00000556380 A2ML1A8K2U0 1454 aa14.51□□□□□ -0.09
SRP54-210ENST00000556380 NOS1P29475 1434 aa14.51□□□□□ -0.09
SRP54-210ENST00000556380 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■■■□□ 15.9
SRP54-210ENST00000556380 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
SRP54-210ENST00000556380 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
SRP54-210ENST00000556380 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
SRP54-210ENST00000556380 IQGAP3Q86VI3 1631 aa14.49□□□□□ -0.09
SRP54-210ENST00000556380 CEP170BQ9Y4F5 1589 aaPredicted RBP14.49□□□□□ -0.09
SRP54-210ENST00000556380 RPRD2Q5VT52 1461 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms