RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 MDM2Q00987 491 aaPredicted RBP7.65□□□□□ -1.18
SPTLC2-204ENST00000556264 ARID3AQ99856 593 aa7.65□□□□□ -1.18
SPTLC2-204ENST00000556264 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
SPTLC2-204ENST00000556264 C7P10643 843 aa7.64□□□□□ -1.19
SPTLC2-204ENST00000556264 CLCN1P35523 988 aa7.64□□□□□ -1.19
SPTLC2-204ENST00000556264 PHOX2BQ99453 314 aa7.64□□□□□ -1.19
SPTLC2-204ENST00000556264 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
SPTLC2-204ENST00000556264 PCDHGA10Q9Y5H3 936 aa7.64□□□□□ -1.19
SPTLC2-204ENST00000556264 TSR1Q2NL82 804 aaKnown RBP7.63□□□□□ -1.19
SPTLC2-204ENST00000556264 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
SPTLC2-204ENST00000556264 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
SPTLC2-204ENST00000556264 ARID3CA6NKF2 412 aa7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 APBB1O00213 710 aa7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 ONECUT3O60422 494 aaPredicted RBP7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 SH3D19Q5HYK7 790 aa7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 TYW1BQ6NUM6 668 aa7.62□□□□□ -1.19
SPTLC2-204ENST00000556264 FAM161AQ3B820 660 aa7.61□□□□□ -1.19
SPTLC2-204ENST00000556264 METRNQ9UJH8 293 aa7.61□□□□□ -1.19
SPTLC2-204ENST00000556264 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
SPTLC2-204ENST00000556264 SKIV2LQ15477 1246 aaKnown RBP7.59□□□□□ -1.19
SPTLC2-204ENST00000556264 CLUAP1Q96AJ1 413 aa7.59□□□□□ -1.19
SPTLC2-204ENST00000556264 BEGAINQ9BUH8 593 aa7.59□□□□□ -1.19
SPTLC2-204ENST00000556264 ATP1B4Q9UN42 357 aaPredicted RBP7.59□□□□□ -1.19
SPTLC2-204ENST00000556264 OATP04181 439 aa7.58□□□□□ -1.2
SPTLC2-204ENST00000556264 NLRP7Q8WX94 980 aa7.58□□□□□ -1.2
SPTLC2-204ENST00000556264 FBXW7Q969H0 707 aa7.58□□□□□ -1.2
SPTLC2-204ENST00000556264 A6NJR5 290 aa7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 METTL3Q86U44 580 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 PROCA1Q8NCQ7 364 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 JPH4Q96JJ6 628 aa7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 POLR3EQ9NVU0 708 aa7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-204ENST00000556264 TRAK2O60296 914 aa7.56□□□□□ -1.2
SPTLC2-204ENST00000556264 PADI6Q6TGC4 694 aa7.56□□□□□ -1.2
SPTLC2-204ENST00000556264 FAM217BQ9NTX9 383 aaPredicted RBP7.56□□□□□ -1.2
SPTLC2-204ENST00000556264 KDM4FA0A1W2PPD8 638 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 FOSBP53539 338 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 MCM6Q14566 821 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 C6orf132Q5T0Z8 1188 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 CERKQ8TCT0 537 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 PXYLP1Q8TE99 480 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 ADGRG1Q9Y653 693 aa7.55□□□□□ -1.2
SPTLC2-204ENST00000556264 POTEIP0CG38 1075 aa7.53□□□□□ -1.2
SPTLC2-204ENST00000556264 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
SPTLC2-204ENST00000556264 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
SPTLC2-204ENST00000556264 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
SPTLC2-204ENST00000556264 MYSM1Q5VVJ2 828 aa7.52□□□□□ -1.21
SPTLC2-204ENST00000556264 TTC13Q8NBP0 860 aa7.51□□□□□ -1.21
SPTLC2-204ENST00000556264 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
SPTLC2-204ENST00000556264 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
SPTLC2-204ENST00000556264 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
SPTLC2-204ENST00000556264 ADAM33Q9BZ11 813 aa7.5□□□□□ -1.21
SPTLC2-204ENST00000556264 NUDT7P0C024 238 aa7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 PRSS12P56730 875 aa7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 PROSER2Q86WR7 435 aaPredicted RBP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 RBM46Q8TBY0 533 aaKnown RBP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 RBM27Q9P2N5 1060 aaKnown RBP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 ZNF777Q9ULD5 760 aaPredicted RBP7.49□□□□□ -1.21
SPTLC2-204ENST00000556264 RAD21O60216 631 aa7.48□□□□□ -1.21
SPTLC2-204ENST00000556264 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
SPTLC2-204ENST00000556264 ARSIQ5FYB1 569 aa7.48□□□□□ -1.21
SPTLC2-204ENST00000556264 CDCA7LQ96GN5 454 aa7.48□□□□□ -1.21
SPTLC2-204ENST00000556264 HRCP23327 699 aa7.46□□□□□ -1.22
SPTLC2-204ENST00000556264 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
SPTLC2-204ENST00000556264 FNBP4Q8N3X1 1017 aaPredicted RBP7.46□□□□□ -1.22
SPTLC2-204ENST00000556264 SPDYE5A6NIY4 337 aa7.45□□□□□ -1.22
SPTLC2-204ENST00000556264 RFC5P40937 340 aa7.45□□□□□ -1.22
SPTLC2-204ENST00000556264 DOK7Q18PE1 504 aa7.45□□□□□ -1.22
SPTLC2-204ENST00000556264 SNRKQ9NRH2 765 aa7.45□□□□□ -1.22
SPTLC2-204ENST00000556264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 FBXO31Q5XUX0 539 aaPredicted RBP7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 FAM198AQ9UFP1 575 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 LIMD1Q9UGP4 676 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 COG6Q9Y2V7 657 aa7.44□□□□□ -1.22
SPTLC2-204ENST00000556264 HOXB3P14651 431 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-204ENST00000556264 COL9A1P20849 921 aa7.43□□□□□ -1.22
SPTLC2-204ENST00000556264 SPIRE2Q8WWL2 714 aa7.43□□□□□ -1.22
SPTLC2-204ENST00000556264 EYA1Q99502 592 aa7.43□□□□□ -1.22
SPTLC2-204ENST00000556264 RIMBP2O15034 1052 aa7.42□□□□□ -1.22
SPTLC2-204ENST00000556264 PDIA4P13667 645 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-204ENST00000556264 TMEM259Q4ZIN3 620 aa7.42□□□□□ -1.22
SPTLC2-204ENST00000556264 GPR153Q6NV75 609 aa7.42□□□□□ -1.22
SPTLC2-204ENST00000556264 CD46P15529 392 aa7.41□□□□□ -1.22
SPTLC2-204ENST00000556264 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
SPTLC2-204ENST00000556264 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
SPTLC2-204ENST00000556264 ZSWIM6Q9HCJ5 1215 aa7.41□□□□□ -1.22
SPTLC2-204ENST00000556264 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
SPTLC2-204ENST00000556264 DDX11L8A8MPP1 907 aa7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 PPP4R3BQ5MIZ7 849 aa7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 NUDT18Q6ZVK8 323 aa7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 SULF1Q8IWU6 871 aa7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
SPTLC2-204ENST00000556264 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms