RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 ADGBQ8N7X0 1667 aa22.04■■□□□ 1.12
ABCD4-224ENST00000556119 MED14O60244 1454 aa22.04■■□□□ 1.12
ABCD4-224ENST00000556119 TNRQ92752 1358 aa22.04■■□□□ 1.12
ABCD4-224ENST00000556119 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
ABCD4-224ENST00000556119 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
ABCD4-224ENST00000556119 NPHP4O75161 1426 aaPredicted RBP22.03■■□□□ 1.12
ABCD4-224ENST00000556119 KIAA1107Q9UPP5 1409 aa22.03■■□□□ 1.12
ABCD4-224ENST00000556119 DEPDC5O75140 1603 aa22.02■■□□□ 1.11
ABCD4-224ENST00000556119 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
ABCD4-224ENST00000556119 THEMISQ8N1K5 641 aaPredicted RBP22.01■■□□□ 1.11
ABCD4-224ENST00000556119 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
ABCD4-224ENST00000556119 CASKIN1Q8WXD9 1431 aa21.99■■□□□ 1.11
ABCD4-224ENST00000556119 IQGAP1P46940 1657 aa21.99■■□□□ 1.11
ABCD4-224ENST00000556119 PZPP20742 1482 aa21.96■■□□□ 1.11
ABCD4-224ENST00000556119 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
ABCD4-224ENST00000556119 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.11
ABCD4-224ENST00000556119 SYNMO15061 1565 aa21.95■■□□□ 1.1
ABCD4-224ENST00000556119 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
ABCD4-224ENST00000556119 MIA2Q96PC5 1412 aa21.93■■□□□ 1.1
ABCD4-224ENST00000556119 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
ABCD4-224ENST00000556119 NLRP1Q9C000 1473 aa21.91■■□□□ 1.1
ABCD4-224ENST00000556119 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
ABCD4-224ENST00000556119 XIRP1Q702N8 1843 aaKnown RBP21.91■■□□□ 1.1
ABCD4-224ENST00000556119 SETD1AO15047 1707 aaKnown RBP21.91■■□□□ 1.1
ABCD4-224ENST00000556119 KDM5DQ9BY66 1539 aa21.89■■□□□ 1.09
ABCD4-224ENST00000556119 KIF3BO15066 747 aa21.88■■□□□ 1.09
ABCD4-224ENST00000556119 WASHC2CQ9Y4E1 1318 aa21.87■■□□□ 1.09
ABCD4-224ENST00000556119 ZC3H13Q5T200 1668 aaKnown RBP21.87■■□□□ 1.09
ABCD4-224ENST00000556119 ZNF644Q9H582 1327 aaPredicted RBP21.86■■□□□ 1.09
ABCD4-224ENST00000556119 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
ABCD4-224ENST00000556119 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
ABCD4-224ENST00000556119 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
ABCD4-224ENST00000556119 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.08
ABCD4-224ENST00000556119 FAM135BQ49AJ0 1406 aa21.82■■□□□ 1.08
ABCD4-224ENST00000556119 SRCAPQ6ZRS2 3230 aa21.8■■□□□ 1.08
ABCD4-224ENST00000556119 CFAP65Q6ZU64 1925 aaKnown RBP21.75■■□□□ 1.07
ABCD4-224ENST00000556119 UBR1Q8IWV7 1749 aa21.75■■□□□ 1.07
ABCD4-224ENST00000556119 UPF1Q92900 1129 aaKnown RBP eCLIP21.74■■□□□ 1.07
ABCD4-224ENST00000556119 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
ABCD4-224ENST00000556119 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
ABCD4-224ENST00000556119 LTKP29376 864 aa21.73■■□□□ 1.07
ABCD4-224ENST00000556119 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
ABCD4-224ENST00000556119 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
ABCD4-224ENST00000556119 TXNDC2Q86VQ3 553 aa21.68■■□□□ 1.06
ABCD4-224ENST00000556119 ERVK-7P63135 1459 aa21.68■■□□□ 1.06
ABCD4-224ENST00000556119 NCOA2Q15596 1464 aa21.68■■□□□ 1.06
ABCD4-224ENST00000556119 ABCC3O15438 1527 aa21.66■■□□□ 1.06
ABCD4-224ENST00000556119 CCDC141Q6ZP82 1450 aa21.66■■□□□ 1.06
ABCD4-224ENST00000556119 ARHGAP23Q9P227 1491 aa21.66■■□□□ 1.06
ABCD4-224ENST00000556119 TMEM94Q12767 1356 aa21.66■■□□□ 1.06
ABCD4-224ENST00000556119 SLIT1O75093 1534 aa21.65■■□□□ 1.06
ABCD4-224ENST00000556119 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
ABCD4-224ENST00000556119 PHLPP1O60346 1717 aa21.62■■□□□ 1.05
ABCD4-224ENST00000556119 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
ABCD4-224ENST00000556119 RBM33Q96EV2 1170 aaKnown RBP21.61■■□□□ 1.05
ABCD4-224ENST00000556119 RSPH4AQ5TD94 716 aa21.6■■□□□ 1.05
ABCD4-224ENST00000556119 JCADQ9P266 1359 aa21.6■■□□□ 1.05
ABCD4-224ENST00000556119 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
ABCD4-224ENST00000556119 CEP152O94986 1710 aa21.58■■□□□ 1.05
ABCD4-224ENST00000556119 EID1Q9Y6B2 187 aa21.58■■□□□ 1.05
ABCD4-224ENST00000556119 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.04
ABCD4-224ENST00000556119 KCNA6P17658 529 aa21.57■■□□□ 1.04
ABCD4-224ENST00000556119 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
ABCD4-224ENST00000556119 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
ABCD4-224ENST00000556119 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
ABCD4-224ENST00000556119 EHBP1L1Q8N3D4 1523 aa21.55■■□□□ 1.04
ABCD4-224ENST00000556119 MROH1Q8NDA8 1641 aa21.55■■□□□ 1.04
ABCD4-224ENST00000556119 LRP6O75581 1613 aa21.55■■□□□ 1.04
ABCD4-224ENST00000556119 SLAIN2Q9P270 581 aa21.54■■□□□ 1.04
ABCD4-224ENST00000556119 TSPY4P0CV99 314 aa21.53■■□□□ 1.04
ABCD4-224ENST00000556119 TSPY10P0CW01 314 aa21.53■■□□□ 1.04
ABCD4-224ENST00000556119 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
ABCD4-224ENST00000556119 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
ABCD4-224ENST00000556119 COL16A1Q07092 1604 aaPredicted RBP21.52■■□□□ 1.04
ABCD4-224ENST00000556119 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
ABCD4-224ENST00000556119 TMEM2Q9UHN6 1383 aa21.51■■□□□ 1.03
ABCD4-224ENST00000556119 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
ABCD4-224ENST00000556119 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
ABCD4-224ENST00000556119 TET3O43151 1660 aa21.5■■□□□ 1.03
ABCD4-224ENST00000556119 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
ABCD4-224ENST00000556119 SPATA31A6Q5VVP1 1343 aa21.48■■□□□ 1.03
ABCD4-224ENST00000556119 MSH6P52701 1360 aa21.48■■□□□ 1.03
ABCD4-224ENST00000556119 RXRBP28702 533 aa21.47■■□□□ 1.03
ABCD4-224ENST00000556119 MEX3CQ5U5Q3 659 aaKnown RBP21.47■■□□□ 1.03
ABCD4-224ENST00000556119 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.03
ABCD4-224ENST00000556119 NWD1Q149M9 1564 aa21.45■■□□□ 1.02
ABCD4-224ENST00000556119 ARHGAP31Q2M1Z3 1444 aa21.45■■□□□ 1.02
ABCD4-224ENST00000556119 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
ABCD4-224ENST00000556119 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
ABCD4-224ENST00000556119 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
ABCD4-224ENST00000556119 KDM5AP29375 1690 aaKnown RBP21.42■■□□□ 1.02
ABCD4-224ENST00000556119 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
ABCD4-224ENST00000556119 SHPRHQ149N8 1683 aa21.41■■□□□ 1.02
ABCD4-224ENST00000556119 EFCAB6Q5THR3 1501 aa21.4■■□□□ 1.02
ABCD4-224ENST00000556119 CHD2O14647 1828 aaKnown RBP21.39■■□□□ 1.02
ABCD4-224ENST00000556119 IDI1Q13907 227 aa21.38■■□□□ 1.01
ABCD4-224ENST00000556119 AHDC1Q5TGY3 1603 aaPredicted RBP21.35■■□□□ 1.01
ABCD4-224ENST00000556119 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
ABCD4-224ENST00000556119 AFF2P51816 1311 aa21.31■■□□□ 1
ABCD4-224ENST00000556119 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms