RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MLECQ14165 292 aa11.42□□□□□ -0.58
TDP1-214ENST00000556063 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
TDP1-214ENST00000556063 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
TDP1-214ENST00000556063 GGT6Q6P531 493 aa11.41□□□□□ -0.58
TDP1-214ENST00000556063 NAIPQ13075 1403 aa11.4□□□□□ -0.58
TDP1-214ENST00000556063 KANK1Q14678 1352 aa11.4□□□□□ -0.59
TDP1-214ENST00000556063 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.59
TDP1-214ENST00000556063 BCORL1Q5H9F3 1711 aa11.39□□□□□ -0.59
TDP1-214ENST00000556063 SETD5Q9C0A6 1442 aa11.38□□□□□ -0.59
TDP1-214ENST00000556063 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
TDP1-214ENST00000556063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.59
TDP1-214ENST00000556063 CNTLNQ9NXG0 1405 aa11.37□□□□□ -0.59
TDP1-214ENST00000556063 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
TDP1-214ENST00000556063 SIGLEC1Q9BZZ2 1709 aa11.37□□□□□ -0.59
TDP1-214ENST00000556063 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
TDP1-214ENST00000556063 RNF17Q9BXT8 1623 aaKnown RBP11.36□□□□□ -0.59
TDP1-214ENST00000556063 HRCP23327 699 aa11.35□□□□□ -0.59
TDP1-214ENST00000556063 TRIM52Q96A61 297 aa11.35□□□□□ -0.59
TDP1-214ENST00000556063 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
TDP1-214ENST00000556063 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
TDP1-214ENST00000556063 NUP155O75694 1391 aa11.34□□□□□ -0.59
TDP1-214ENST00000556063 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
TDP1-214ENST00000556063 PRDM15P57071 1507 aaPredicted RBP11.33□□□□□ -0.6
TDP1-214ENST00000556063 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
TDP1-214ENST00000556063 UNC13BO14795 1591 aa11.33□□□□□ -0.6
TDP1-214ENST00000556063 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
TDP1-214ENST00000556063 PCGF6Q9BYE7 350 aa11.32□□□□□ -0.6
TDP1-214ENST00000556063 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
TDP1-214ENST00000556063 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
TDP1-214ENST00000556063 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
TDP1-214ENST00000556063 MROH1Q8NDA8 1641 aa11.31□□□□□ -0.6
TDP1-214ENST00000556063 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
TDP1-214ENST00000556063 ABCC3O15438 1527 aa11.3□□□□□ -0.6
TDP1-214ENST00000556063 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
TDP1-214ENST00000556063 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
TDP1-214ENST00000556063 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
TDP1-214ENST00000556063 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
TDP1-214ENST00000556063 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
TDP1-214ENST00000556063 LMTK2Q8IWU2 1503 aa11.29□□□□□ -0.6
TDP1-214ENST00000556063 IQGAP3Q86VI3 1631 aa11.28□□□□□ -0.6
TDP1-214ENST00000556063 PTPRMP28827 1452 aa11.28□□□□□ -0.6
TDP1-214ENST00000556063 CEP152O94986 1710 aa11.28□□□□□ -0.6
TDP1-214ENST00000556063 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
TDP1-214ENST00000556063 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
TDP1-214ENST00000556063 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.61
TDP1-214ENST00000556063 TET3O43151 1660 aa11.27□□□□□ -0.61
TDP1-214ENST00000556063 PZPP20742 1482 aa11.25□□□□□ -0.61
TDP1-214ENST00000556063 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
TDP1-214ENST00000556063 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
TDP1-214ENST00000556063 CEBPAP49715 358 aaPredicted RBP11.25□□□□□ -0.61
TDP1-214ENST00000556063 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
TDP1-214ENST00000556063 NPATQ14207 1427 aa11.25□□□□□ -0.61
TDP1-214ENST00000556063 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
TDP1-214ENST00000556063 C3P01024 1663 aa11.24□□□□□ -0.61
TDP1-214ENST00000556063 PKD2Q13563 968 aa11.24□□□□□ -0.61
TDP1-214ENST00000556063 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
TDP1-214ENST00000556063 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
TDP1-214ENST00000556063 TNRQ92752 1358 aa11.21□□□□□ -0.61
TDP1-214ENST00000556063 E9PCH4 1651 aa11.2□□□□□ -0.62
TDP1-214ENST00000556063 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
TDP1-214ENST00000556063 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
TDP1-214ENST00000556063 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
TDP1-214ENST00000556063 NOS1P29475 1434 aa11.18□□□□□ -0.62
TDP1-214ENST00000556063 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
TDP1-214ENST00000556063 NLRP1Q9C000 1473 aa11.18□□□□□ -0.62
TDP1-214ENST00000556063 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
TDP1-214ENST00000556063 PTPRTO14522 1441 aa11.17□□□□□ -0.62
TDP1-214ENST00000556063 SPHKAPQ2M3C7 1700 aa11.16□□□□□ -0.62
TDP1-214ENST00000556063 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
TDP1-214ENST00000556063 TRPM2O94759 1503 aa11.14□□□□□ -0.63
TDP1-214ENST00000556063 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
TDP1-214ENST00000556063 IDI1Q13907 227 aa11.14□□□□□ -0.63
TDP1-214ENST00000556063 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
TDP1-214ENST00000556063 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
TDP1-214ENST00000556063 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
TDP1-214ENST00000556063 SYNMO15061 1565 aa11.13□□□□□ -0.63
TDP1-214ENST00000556063 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
TDP1-214ENST00000556063 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
TDP1-214ENST00000556063 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
TDP1-214ENST00000556063 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
TDP1-214ENST00000556063 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
TDP1-214ENST00000556063 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
TDP1-214ENST00000556063 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
TDP1-214ENST00000556063 PIK3C2BO00750 1634 aa11.1□□□□□ -0.63
TDP1-214ENST00000556063 KIF1BO60333 1816 aa11.1□□□□□ -0.63
TDP1-214ENST00000556063 CCER1Q8TC90 406 aaPredicted RBP11.1□□□□□ -0.63
TDP1-214ENST00000556063 CLSPNQ9HAW4 1339 aa11.09□□□□□ -0.63
TDP1-214ENST00000556063 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
TDP1-214ENST00000556063 LMTK3Q96Q04 1460 aa11.09□□□□□ -0.63
TDP1-214ENST00000556063 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
TDP1-214ENST00000556063 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
TDP1-214ENST00000556063 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
TDP1-214ENST00000556063 ADGRB3O60242 1522 aa11.09□□□□□ -0.63
TDP1-214ENST00000556063 UBR1Q8IWV7 1749 aa11.07□□□□□ -0.64
TDP1-214ENST00000556063 ANKLE2Q86XL3 938 aa11.07□□□□□ -0.64
TDP1-214ENST00000556063 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
TDP1-214ENST00000556063 RPGRIP1LQ68CZ1 1315 aa11.07□□□□□ -0.64
TDP1-214ENST00000556063 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
TDP1-214ENST00000556063 HSPA2P54652 639 aa11.06□□□□□ -0.64
TDP1-214ENST00000556063 TMEM2Q9UHN6 1383 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms