RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MYOM3Q5VTT5 1437 aa12.22□□□□□ -0.45
PTCSC3-201ENST00000556013 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
PTCSC3-201ENST00000556013 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
PTCSC3-201ENST00000556013 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
PTCSC3-201ENST00000556013 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
PTCSC3-201ENST00000556013 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
PTCSC3-201ENST00000556013 PZPP20742 1482 aa12.21□□□□□ -0.46
PTCSC3-201ENST00000556013 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
PTCSC3-201ENST00000556013 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
PTCSC3-201ENST00000556013 TNRQ92752 1358 aa12.19□□□□□ -0.46
PTCSC3-201ENST00000556013 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
PTCSC3-201ENST00000556013 MAST1Q9Y2H9 1570 aa12.19□□□□□ -0.46
PTCSC3-201ENST00000556013 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
PTCSC3-201ENST00000556013 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
PTCSC3-201ENST00000556013 ANKLE2Q86XL3 938 aa12.18□□□□□ -0.46
PTCSC3-201ENST00000556013 ZNF142P52746 1687 aaPredicted RBP12.17□□□□□ -0.46
PTCSC3-201ENST00000556013 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
PTCSC3-201ENST00000556013 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.47
PTCSC3-201ENST00000556013 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
PTCSC3-201ENST00000556013 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
PTCSC3-201ENST00000556013 ABCC5O15440 1437 aa12.13□□□□□ -0.47
PTCSC3-201ENST00000556013 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
PTCSC3-201ENST00000556013 ARHGAP31Q2M1Z3 1444 aa12.12□□□□□ -0.47
PTCSC3-201ENST00000556013 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
PTCSC3-201ENST00000556013 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
PTCSC3-201ENST00000556013 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 RNF17Q9BXT8 1623 aaKnown RBP12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 MED14O60244 1454 aa12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 KIF15Q9NS87 1388 aa12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 RRP7BPQ9NSQ0 103 aa12.11□□□□□ -0.47
PTCSC3-201ENST00000556013 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
PTCSC3-201ENST00000556013 ABCC3O15438 1527 aa12.1□□□□□ -0.47
PTCSC3-201ENST00000556013 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
PTCSC3-201ENST00000556013 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
PTCSC3-201ENST00000556013 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
PTCSC3-201ENST00000556013 DAPK1P53355 1430 aa12.09□□□□□ -0.47
PTCSC3-201ENST00000556013 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
PTCSC3-201ENST00000556013 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
PTCSC3-201ENST00000556013 TOM1O60784 492 aa12.08□□□□□ -0.48
PTCSC3-201ENST00000556013 KANK1Q14678 1352 aa12.07□□□□□ -0.48
PTCSC3-201ENST00000556013 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
PTCSC3-201ENST00000556013 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
PTCSC3-201ENST00000556013 CPS1P31327 1500 aa12.06□□□□□ -0.48
PTCSC3-201ENST00000556013 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
PTCSC3-201ENST00000556013 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
PTCSC3-201ENST00000556013 MROH1Q8NDA8 1641 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 SLC52A1Q9NWF4 448 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 NEURL4Q96JN8 1562 aa12.04□□□□□ -0.48
PTCSC3-201ENST00000556013 PRDM15P57071 1507 aaPredicted RBP12.03□□□□□ -0.48
PTCSC3-201ENST00000556013 ADGRL2O95490 1459 aa12.02□□□□□ -0.48
PTCSC3-201ENST00000556013 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.48
PTCSC3-201ENST00000556013 IDI1Q13907 227 aa12.02□□□□□ -0.49
PTCSC3-201ENST00000556013 DISP3Q9P2K9 1392 aa12.02□□□□□ -0.49
PTCSC3-201ENST00000556013 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
PTCSC3-201ENST00000556013 LTKP29376 864 aa12.01□□□□□ -0.49
PTCSC3-201ENST00000556013 FAM50AQ14320 339 aaKnown RBP12.01□□□□□ -0.49
PTCSC3-201ENST00000556013 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
PTCSC3-201ENST00000556013 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
PTCSC3-201ENST00000556013 SLIT1O75093 1534 aa12□□□□□ -0.49
PTCSC3-201ENST00000556013 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
PTCSC3-201ENST00000556013 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
PTCSC3-201ENST00000556013 TMEM2Q9UHN6 1383 aa11.99□□□□□ -0.49
PTCSC3-201ENST00000556013 ANKRD50Q9ULJ7 1429 aa11.99□□□□□ -0.49
PTCSC3-201ENST00000556013 SCAF11Q99590 1463 aaKnown RBP11.99□□□□□ -0.49
PTCSC3-201ENST00000556013 VWDEQ8N2E2 1590 aa11.99□□□□□ -0.49
PTCSC3-201ENST00000556013 NOS1P29475 1434 aa11.98□□□□□ -0.49
PTCSC3-201ENST00000556013 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
PTCSC3-201ENST00000556013 CFAP65Q6ZU64 1925 aaKnown RBP11.97□□□□□ -0.49
PTCSC3-201ENST00000556013 CEP152O94986 1710 aa11.97□□□□□ -0.49
PTCSC3-201ENST00000556013 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
PTCSC3-201ENST00000556013 RPRD2Q5VT52 1461 aaKnown RBP11.96□□□□□ -0.49
PTCSC3-201ENST00000556013 UBR1Q8IWV7 1749 aa11.96□□□□□ -0.49
PTCSC3-201ENST00000556013 KDM5AP29375 1690 aaKnown RBP11.95□□□□□ -0.5
PTCSC3-201ENST00000556013 SOCS7O14512 581 aa11.95□□□□□ -0.5
PTCSC3-201ENST00000556013 HSPA1LP34931 641 aa11.95□□□□□ -0.5
PTCSC3-201ENST00000556013 PIP4K2BP78356 416 aa11.95□□□□□ -0.5
PTCSC3-201ENST00000556013 KCNA6P17658 529 aa11.94□□□□□ -0.5
PTCSC3-201ENST00000556013 ILDR2Q71H61 639 aa11.94□□□□□ -0.5
PTCSC3-201ENST00000556013 LRRC7Q96NW7 1537 aa11.94□□□□□ -0.5
PTCSC3-201ENST00000556013 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
PTCSC3-201ENST00000556013 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
PTCSC3-201ENST00000556013 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTCSC3-201ENST00000556013 TBX22Q9Y458 520 aa11.9□□□□□ -0.5
PTCSC3-201ENST00000556013 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
PTCSC3-201ENST00000556013 SYNMO15061 1565 aa11.89□□□□□ -0.51
PTCSC3-201ENST00000556013 TET3O43151 1660 aa11.89□□□□□ -0.51
PTCSC3-201ENST00000556013 FAM135BQ49AJ0 1406 aa11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 NUP155O75694 1391 aa11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
PTCSC3-201ENST00000556013 ALKQ9UM73 1620 aa11.86□□□□□ -0.51
PTCSC3-201ENST00000556013 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
PTCSC3-201ENST00000556013 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms