RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
TMEM260-208ENST00000555905 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
TMEM260-208ENST00000555905 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
TMEM260-208ENST00000555905 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
TMEM260-208ENST00000555905 KCNA4P22459 653 aa16.36■□□□□ 0.21
TMEM260-208ENST00000555905 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
TMEM260-208ENST00000555905 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
TMEM260-208ENST00000555905 A2MP01023 1474 aa16.35■□□□□ 0.21
TMEM260-208ENST00000555905 EIF2AK4Q9P2K8 1649 aaKnown RBP16.34■□□□□ 0.21
TMEM260-208ENST00000555905 ATP10AO60312 1499 aa16.34■□□□□ 0.21
TMEM260-208ENST00000555905 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
TMEM260-208ENST00000555905 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
TMEM260-208ENST00000555905 REREQ9P2R6 1566 aa16.3■□□□□ 0.2
TMEM260-208ENST00000555905 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
TMEM260-208ENST00000555905 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
TMEM260-208ENST00000555905 UNC13BO14795 1591 aa16.29■□□□□ 0.2
TMEM260-208ENST00000555905 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
TMEM260-208ENST00000555905 KIF3BO15066 747 aa16.28■□□□□ 0.2
TMEM260-208ENST00000555905 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
TMEM260-208ENST00000555905 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
TMEM260-208ENST00000555905 NUP155O75694 1391 aa16.26■□□□□ 0.19
TMEM260-208ENST00000555905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
TMEM260-208ENST00000555905 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
TMEM260-208ENST00000555905 KDM5DQ9BY66 1539 aa16.25■□□□□ 0.19
TMEM260-208ENST00000555905 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
TMEM260-208ENST00000555905 KANK1Q14678 1352 aa16.25■□□□□ 0.19
TMEM260-208ENST00000555905 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
TMEM260-208ENST00000555905 AGLP35573 1532 aa16.24■□□□□ 0.19
TMEM260-208ENST00000555905 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
TMEM260-208ENST00000555905 IQGAP3Q86VI3 1631 aa16.23■□□□□ 0.19
TMEM260-208ENST00000555905 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
TMEM260-208ENST00000555905 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
TMEM260-208ENST00000555905 PZPP20742 1482 aa16.22■□□□□ 0.19
TMEM260-208ENST00000555905 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.19
TMEM260-208ENST00000555905 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
TMEM260-208ENST00000555905 GGT6Q6P531 493 aa16.2■□□□□ 0.18
TMEM260-208ENST00000555905 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
TMEM260-208ENST00000555905 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
TMEM260-208ENST00000555905 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
TMEM260-208ENST00000555905 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
TMEM260-208ENST00000555905 TET3O43151 1660 aa16.16■□□□□ 0.18
TMEM260-208ENST00000555905 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
TMEM260-208ENST00000555905 CEP152O94986 1710 aa16.16■□□□□ 0.18
TMEM260-208ENST00000555905 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
TMEM260-208ENST00000555905 PKD2Q13563 968 aa16.15■□□□□ 0.18
TMEM260-208ENST00000555905 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.18
TMEM260-208ENST00000555905 ABCC3O15438 1527 aa16.14■□□□□ 0.17
TMEM260-208ENST00000555905 MLECQ14165 292 aa16.13■□□□□ 0.17
TMEM260-208ENST00000555905 EFCAB6Q5THR3 1501 aa16.11■□□□□ 0.17
TMEM260-208ENST00000555905 ESF1Q9H501 851 aaKnown RBP16.11■□□□□ 0.17
TMEM260-208ENST00000555905 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
TMEM260-208ENST00000555905 E9PCH4 1651 aa16.1■□□□□ 0.17
TMEM260-208ENST00000555905 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
TMEM260-208ENST00000555905 ANKRD30BQ9BXX2 1392 aa16.07■□□□□ 0.16
TMEM260-208ENST00000555905 RPRD2Q5VT52 1461 aaKnown RBP16.07■□□□□ 0.16
TMEM260-208ENST00000555905 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
TMEM260-208ENST00000555905 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
TMEM260-208ENST00000555905 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
TMEM260-208ENST00000555905 ARHGAP31Q2M1Z3 1444 aa16.05■□□□□ 0.16
TMEM260-208ENST00000555905 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
TMEM260-208ENST00000555905 NPATQ14207 1427 aa16.03■□□□□ 0.16
TMEM260-208ENST00000555905 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
TMEM260-208ENST00000555905 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.16
TMEM260-208ENST00000555905 NEUROD1Q13562 356 aa16.02■□□□□ 0.16
TMEM260-208ENST00000555905 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
TMEM260-208ENST00000555905 TRPM2O94759 1503 aa16.01■□□□□ 0.15
TMEM260-208ENST00000555905 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
TMEM260-208ENST00000555905 PTPRTO14522 1441 aa16.01■□□□□ 0.15
TMEM260-208ENST00000555905 PLA2R1Q13018 1463 aa16■□□□□ 0.15
TMEM260-208ENST00000555905 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
TMEM260-208ENST00000555905 ZMYM3Q14202 1370 aa16■□□□□ 0.15
TMEM260-208ENST00000555905 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
TMEM260-208ENST00000555905 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
TMEM260-208ENST00000555905 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
TMEM260-208ENST00000555905 NOS1P29475 1434 aa15.97■□□□□ 0.15
TMEM260-208ENST00000555905 RIMS1Q86UR5 1692 aaKnown RBP15.96■□□□□ 0.15
TMEM260-208ENST00000555905 ERVK-7P63135 1459 aa15.96■□□□□ 0.14
TMEM260-208ENST00000555905 C3P01024 1663 aa15.95■□□□□ 0.14
TMEM260-208ENST00000555905 CLTCL1P53675 1640 aa15.95■□□□□ 0.14
TMEM260-208ENST00000555905 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
TMEM260-208ENST00000555905 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
TMEM260-208ENST00000555905 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
TMEM260-208ENST00000555905 SYNMO15061 1565 aa15.94■□□□□ 0.14
TMEM260-208ENST00000555905 SPATA31D1Q6ZQQ2 1576 aa15.94■□□□□ 0.14
TMEM260-208ENST00000555905 KIF1BO60333 1816 aa15.93■□□□□ 0.14
TMEM260-208ENST00000555905 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
TMEM260-208ENST00000555905 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
TMEM260-208ENST00000555905 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
TMEM260-208ENST00000555905 TNRQ92752 1358 aa15.89■□□□□ 0.13
TMEM260-208ENST00000555905 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
TMEM260-208ENST00000555905 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
TMEM260-208ENST00000555905 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
TMEM260-208ENST00000555905 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
TMEM260-208ENST00000555905 IDI1Q13907 227 aa15.86■□□□□ 0.13
TMEM260-208ENST00000555905 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
TMEM260-208ENST00000555905 L3MBTL2Q969R5 705 aa15.86■□□□□ 0.13
TMEM260-208ENST00000555905 PTPRMP28827 1452 aa15.84■□□□□ 0.13
TMEM260-208ENST00000555905 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
TMEM260-208ENST00000555905 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
TMEM260-208ENST00000555905 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms