RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
EFCAB11-208ENST00000555872 TIAM1Q13009 1591 aa13.73□□□□□ -0.21
EFCAB11-208ENST00000555872 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
EFCAB11-208ENST00000555872 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
EFCAB11-208ENST00000555872 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
EFCAB11-208ENST00000555872 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
EFCAB11-208ENST00000555872 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
EFCAB11-208ENST00000555872 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
EFCAB11-208ENST00000555872 ZNF830Q96NB3 372 aaPredicted RBP13.71□□□□□ -0.21
EFCAB11-208ENST00000555872 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
EFCAB11-208ENST00000555872 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
EFCAB11-208ENST00000555872 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
EFCAB11-208ENST00000555872 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
EFCAB11-208ENST00000555872 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
EFCAB11-208ENST00000555872 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
EFCAB11-208ENST00000555872 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
EFCAB11-208ENST00000555872 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
EFCAB11-208ENST00000555872 ABCC10Q5T3U5 1492 aa13.66□□□□□ -0.22
EFCAB11-208ENST00000555872 FBLN2P98095 1184 aa13.66□□□□□ -0.22
EFCAB11-208ENST00000555872 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
EFCAB11-208ENST00000555872 CARMIL2Q6F5E8 1435 aa13.66□□□□□ -0.22
EFCAB11-208ENST00000555872 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
EFCAB11-208ENST00000555872 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-208ENST00000555872 GSE1Q14687 1217 aa13.64□□□□□ -0.23
EFCAB11-208ENST00000555872 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
EFCAB11-208ENST00000555872 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-208ENST00000555872 PPM1GO15355 546 aaPredicted RBP13.63□□□□□ -0.23
EFCAB11-208ENST00000555872 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
EFCAB11-208ENST00000555872 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
EFCAB11-208ENST00000555872 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
EFCAB11-208ENST00000555872 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
EFCAB11-208ENST00000555872 GLI2P10070 1586 aa13.61□□□□□ -0.23
EFCAB11-208ENST00000555872 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
EFCAB11-208ENST00000555872 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
EFCAB11-208ENST00000555872 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
EFCAB11-208ENST00000555872 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
EFCAB11-208ENST00000555872 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
EFCAB11-208ENST00000555872 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
EFCAB11-208ENST00000555872 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
EFCAB11-208ENST00000555872 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
EFCAB11-208ENST00000555872 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
EFCAB11-208ENST00000555872 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
EFCAB11-208ENST00000555872 TMEM51Q9NW97 253 aa13.57□□□□□ -0.24
EFCAB11-208ENST00000555872 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
EFCAB11-208ENST00000555872 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
EFCAB11-208ENST00000555872 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
EFCAB11-208ENST00000555872 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-208ENST00000555872 RGS22Q8NE09 1264 aa13.55□□□□□ -0.24
EFCAB11-208ENST00000555872 ABCA8O94911 1581 aa13.55□□□□□ -0.24
EFCAB11-208ENST00000555872 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
EFCAB11-208ENST00000555872 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
EFCAB11-208ENST00000555872 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
EFCAB11-208ENST00000555872 PDE4AP27815 886 aa13.54□□□□□ -0.24
EFCAB11-208ENST00000555872 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
EFCAB11-208ENST00000555872 ARID4BQ4LE39 1312 aaPredicted RBP13.53□□□□□ -0.24
EFCAB11-208ENST00000555872 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
EFCAB11-208ENST00000555872 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.24
EFCAB11-208ENST00000555872 CENPJQ9HC77 1338 aaPredicted RBP13.51□□□□□ -0.25
EFCAB11-208ENST00000555872 ILDR2Q71H61 639 aa13.51□□□□□ -0.25
EFCAB11-208ENST00000555872 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
EFCAB11-208ENST00000555872 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
EFCAB11-208ENST00000555872 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
EFCAB11-208ENST00000555872 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
EFCAB11-208ENST00000555872 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 BACH2Q9BYV9 841 aa13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
EFCAB11-208ENST00000555872 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
EFCAB11-208ENST00000555872 CDK13Q14004 1512 aaKnown RBP13.48□□□□□ -0.25
EFCAB11-208ENST00000555872 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
EFCAB11-208ENST00000555872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.25
EFCAB11-208ENST00000555872 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
EFCAB11-208ENST00000555872 PTPRGP23470 1445 aa13.47□□□□□ -0.25
EFCAB11-208ENST00000555872 FAM193AP78312 1265 aa13.47□□□□□ -0.25
EFCAB11-208ENST00000555872 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
EFCAB11-208ENST00000555872 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.25
EFCAB11-208ENST00000555872 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
EFCAB11-208ENST00000555872 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.25
EFCAB11-208ENST00000555872 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.26
EFCAB11-208ENST00000555872 NCOA2Q15596 1464 aa13.45□□□□□ -0.26
EFCAB11-208ENST00000555872 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
EFCAB11-208ENST00000555872 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
EFCAB11-208ENST00000555872 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
EFCAB11-208ENST00000555872 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
EFCAB11-208ENST00000555872 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
EFCAB11-208ENST00000555872 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
EFCAB11-208ENST00000555872 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
EFCAB11-208ENST00000555872 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
EFCAB11-208ENST00000555872 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
EFCAB11-208ENST00000555872 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
EFCAB11-208ENST00000555872 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
EFCAB11-208ENST00000555872 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
EFCAB11-208ENST00000555872 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
EFCAB11-208ENST00000555872 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
EFCAB11-208ENST00000555872 MS4A1P11836 297 aa13.4□□□□□ -0.26
EFCAB11-208ENST00000555872 ATP10BO94823 1461 aa13.4□□□□□ -0.26
EFCAB11-208ENST00000555872 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.27
EFCAB11-208ENST00000555872 ITSN2Q9NZM3 1697 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms