RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 WASHC2CQ9Y4E1 1318 aa34.86■■■■□ 3.17
CDKN3-208ENST00000555837 ADGRL2O95490 1459 aa34.86■■■■□ 3.17
CDKN3-208ENST00000555837 NCOA1Q15788 1441 aa34.86■■■■□ 3.17
CDKN3-208ENST00000555837 CEBPAP49715 358 aaPredicted RBP34.84■■■■□ 3.17
CDKN3-208ENST00000555837 SETD1BQ9UPS6 1966 aaKnown RBP34.83■■■■□ 3.17
CDKN3-208ENST00000555837 C3P01024 1663 aa34.82■■■■□ 3.16
CDKN3-208ENST00000555837 NPATQ14207 1427 aa34.81■■■■□ 3.16
CDKN3-208ENST00000555837 KDM5DQ9BY66 1539 aa34.81■■■■□ 3.16
CDKN3-208ENST00000555837 CLTCQ00610 1675 aaKnown RBP34.81■■■■□ 3.16
CDKN3-208ENST00000555837 RNF17Q9BXT8 1623 aaKnown RBP34.8■■■■□ 3.16
CDKN3-208ENST00000555837 RRBP1Q9P2E9 1410 aaKnown RBP34.8■■■■□ 3.16
CDKN3-208ENST00000555837 ROCK1Q13464 1354 aa34.78■■■■□ 3.16
CDKN3-208ENST00000555837 KANK1Q14678 1352 aa34.76■■■■□ 3.16
CDKN3-208ENST00000555837 UHRF1BP1Q6BDS2 1440 aa34.75■■■■□ 3.15
CDKN3-208ENST00000555837 PREX1Q8TCU6 1659 aa34.75■■■■□ 3.15
CDKN3-208ENST00000555837 ZC3H13Q5T200 1668 aaKnown RBP34.73■■■■□ 3.15
CDKN3-208ENST00000555837 LMTK3Q96Q04 1460 aa34.71■■■■□ 3.15
CDKN3-208ENST00000555837 ITGAEP38570 1179 aa34.7■■■■□ 3.15
CDKN3-208ENST00000555837 ANKRD50Q9ULJ7 1429 aa34.7■■■■□ 3.15
CDKN3-208ENST00000555837 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
CDKN3-208ENST00000555837 PZPP20742 1482 aa34.65■■■■□ 3.14
CDKN3-208ENST00000555837 PTPRKQ15262 1439 aa34.64■■■■□ 3.14
CDKN3-208ENST00000555837 ABCC3O15438 1527 aa34.62■■■■□ 3.13
CDKN3-208ENST00000555837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.62■■■■□ 3.13
CDKN3-208ENST00000555837 DEPDC5O75140 1603 aa34.61■■■■□ 3.13
CDKN3-208ENST00000555837 MROH1Q8NDA8 1641 aa34.58■■■■□ 3.13
CDKN3-208ENST00000555837 TNRQ92752 1358 aa34.54■■■■□ 3.12
CDKN3-208ENST00000555837 ARHGAP31Q2M1Z3 1444 aa34.53■■■■□ 3.12
CDKN3-208ENST00000555837 HSPA2P54652 639 aa34.51■■■■□ 3.12
CDKN3-208ENST00000555837 DMRT2Q9Y5R5 561 aa34.5■■■■□ 3.11
CDKN3-208ENST00000555837 CAMSAP1Q5T5Y3 1602 aa34.5■■■■□ 3.11
CDKN3-208ENST00000555837 LMTK2Q8IWU2 1503 aa34.5■■■■□ 3.11
CDKN3-208ENST00000555837 CEP152O94986 1710 aa34.48■■■■□ 3.11
CDKN3-208ENST00000555837 MYO3AQ8NEV4 1616 aa34.47■■■■□ 3.11
CDKN3-208ENST00000555837 NLRP1Q9C000 1473 aa34.46■■■■□ 3.11
CDKN3-208ENST00000555837 FBXO31Q5XUX0 539 aaPredicted RBP34.46■■■■□ 3.11
CDKN3-208ENST00000555837 VWDEQ8N2E2 1590 aa34.45■■■■□ 3.11
CDKN3-208ENST00000555837 A2ML1A8K2U0 1454 aa34.43■■■■□ 3.1
CDKN3-208ENST00000555837 CEP170BQ9Y4F5 1589 aaPredicted RBP34.43■■■■□ 3.1
CDKN3-208ENST00000555837 ZNF142P52746 1687 aaPredicted RBP34.43■■■■□ 3.1
CDKN3-208ENST00000555837 SPATA31D1Q6ZQQ2 1576 aa34.41■■■■□ 3.1
CDKN3-208ENST00000555837 UNC13BO14795 1591 aa34.4■■■■□ 3.1
CDKN3-208ENST00000555837 ERVK-7P63135 1459 aa34.4■■■■□ 3.1
CDKN3-208ENST00000555837 ACIN1Q9UKV3 1341 aaKnown RBP34.38■■■■□ 3.09
CDKN3-208ENST00000555837 THEMISQ8N1K5 641 aaPredicted RBP34.38■■■■□ 3.09
CDKN3-208ENST00000555837 RPRD2Q5VT52 1461 aaKnown RBP34.38■■■■□ 3.09
CDKN3-208ENST00000555837 HFM1A2PYH4 1435 aa34.36■■■■□ 3.09
CDKN3-208ENST00000555837 NUP155O75694 1391 aa34.35■■■■□ 3.09
CDKN3-208ENST00000555837 EFCAB6Q5THR3 1501 aa34.35■■■■□ 3.09
CDKN3-208ENST00000555837 NAIPQ13075 1403 aa34.34■■■■□ 3.09
CDKN3-208ENST00000555837 PLA2R1Q13018 1463 aa34.33■■■■□ 3.09
CDKN3-208ENST00000555837 PKD2Q13563 968 aa34.33■■■■□ 3.09
CDKN3-208ENST00000555837 TET3O43151 1660 aa34.31■■■■□ 3.08
CDKN3-208ENST00000555837 GCC2Q8IWJ2 1684 aa34.31■■■■□ 3.08
CDKN3-208ENST00000555837 IQGAP3Q86VI3 1631 aa34.28■■■■□ 3.08
CDKN3-208ENST00000555837 UGGT1Q9NYU2 1555 aa34.28■■■■□ 3.08
CDKN3-208ENST00000555837 SLC52A1Q9NWF4 448 aa34.27■■■■□ 3.08
CDKN3-208ENST00000555837 CFAP65Q6ZU64 1925 aaKnown RBP34.26■■■■□ 3.07
CDKN3-208ENST00000555837 PTPRTO14522 1441 aa34.24■■■■□ 3.07
CDKN3-208ENST00000555837 STAG3Q9UJ98 1225 aa34.23■■■■□ 3.07
CDKN3-208ENST00000555837 ANKLE2Q86XL3 938 aa34.21■■■■□ 3.07
CDKN3-208ENST00000555837 NOS1P29475 1434 aa34.21■■■■□ 3.07
CDKN3-208ENST00000555837 STRCQ7RTU9 1775 aa34.2■■■■□ 3.07
CDKN3-208ENST00000555837 TRIM52Q96A61 297 aa34.18■■■■□ 3.06
CDKN3-208ENST00000555837 KDM5AP29375 1690 aaKnown RBP34.12■■■■□ 3.05
CDKN3-208ENST00000555837 NCKAP5LQ9HCH0 1330 aa34.12■■■■□ 3.05
CDKN3-208ENST00000555837 IDI1Q13907 227 aa34.11■■■■□ 3.05
CDKN3-208ENST00000555837 EID1Q9Y6B2 187 aa34.1■■■■□ 3.05
CDKN3-208ENST00000555837 E9PCH4 1651 aa34.09■■■■□ 3.05
CDKN3-208ENST00000555837 UBR1Q8IWV7 1749 aa34.08■■■■□ 3.05
CDKN3-208ENST00000555837 HDGFP51858 240 aaKnown RBP34.08■■■■□ 3.05
CDKN3-208ENST00000555837 SYNMO15061 1565 aa34.07■■■■□ 3.05
CDKN3-208ENST00000555837 SETD5Q9C0A6 1442 aa34.06■■■■□ 3.04
CDKN3-208ENST00000555837 POLR1AO95602 1720 aaPredicted RBP34.05■■■■□ 3.04
CDKN3-208ENST00000555837 SLC4A1APQ9BWU0 796 aaKnown RBP34.05■■■■□ 3.04
CDKN3-208ENST00000555837 PIK3C2BO00750 1634 aa34.04■■■■□ 3.04
CDKN3-208ENST00000555837 SLIT1O75093 1534 aa34.01■■■■□ 3.04
CDKN3-208ENST00000555837 MED14O60244 1454 aa34■■■■□ 3.03
CDKN3-208ENST00000555837 ADGRB3O60242 1522 aa33.99■■■■□ 3.03
CDKN3-208ENST00000555837 TMEM2Q9UHN6 1383 aa33.99■■■■□ 3.03
CDKN3-208ENST00000555837 TXNDC2Q86VQ3 553 aa33.98■■■■□ 3.03
CDKN3-208ENST00000555837 SCAF11Q99590 1463 aaKnown RBP33.97■■■■□ 3.03
CDKN3-208ENST00000555837 ARHGAP23Q9P227 1491 aa33.97■■■■□ 3.03
CDKN3-208ENST00000555837 NPHP4O75161 1426 aaPredicted RBP33.96■■■■□ 3.03
CDKN3-208ENST00000555837 SPHKAPQ2M3C7 1700 aa33.93■■■■□ 3.02
CDKN3-208ENST00000555837 CHGAP10645 457 aaKnown RBP33.93■■■■□ 3.02
CDKN3-208ENST00000555837 HRCP23327 699 aa33.93■■■■□ 3.02
CDKN3-208ENST00000555837 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.92■■■■□ 3.02
CDKN3-208ENST00000555837 NEURL4Q96JN8 1562 aa33.9■■■■□ 3.02
CDKN3-208ENST00000555837 MPHOSPH9Q99550 1183 aa33.88■■■■□ 3.01
CDKN3-208ENST00000555837 IQGAP1P46940 1657 aa33.87■■■■□ 3.01
CDKN3-208ENST00000555837 CERKQ8TCT0 537 aa33.87■■■■□ 3.01
CDKN3-208ENST00000555837 RAB3GAP2Q9H2M9 1393 aa33.86■■■■□ 3.01
CDKN3-208ENST00000555837 TRPM2O94759 1503 aa33.86■■■■□ 3.01
CDKN3-208ENST00000555837 TMEM131LA2VDJ0 1609 aa33.86■■■■□ 3.01
CDKN3-208ENST00000555837 PPP1R15AO75807 674 aaPredicted RBP33.85■■■■□ 3.01
CDKN3-208ENST00000555837 LTKP29376 864 aa33.84■■■■□ 3.01
CDKN3-208ENST00000555837 RIMS2Q9UQ26 1411 aa33.79■■■■□ 3
CDKN3-208ENST00000555837 BCANQ96GW7 911 aa33.79■■■■□ 3
CDKN3-208ENST00000555837 ZNF335Q9H4Z2 1342 aaPredicted RBP33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms