RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
MTHFD1-211ENST00000555709 A2MP01023 1474 aa18.2■□□□□ 0.5
MTHFD1-211ENST00000555709 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 LRRC7Q96NW7 1537 aa18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 MED14O60244 1454 aa18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 SPAG9O60271 1321 aaKnown RBP18.19■□□□□ 0.5
MTHFD1-211ENST00000555709 GGT6Q6P531 493 aa18.18■□□□□ 0.5
MTHFD1-211ENST00000555709 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
MTHFD1-211ENST00000555709 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
MTHFD1-211ENST00000555709 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
MTHFD1-211ENST00000555709 NPHP4O75161 1426 aaPredicted RBP18.16■□□□□ 0.5
MTHFD1-211ENST00000555709 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
MTHFD1-211ENST00000555709 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
MTHFD1-211ENST00000555709 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
MTHFD1-211ENST00000555709 DEPDC5O75140 1603 aa18.15■□□□□ 0.5
MTHFD1-211ENST00000555709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
MTHFD1-211ENST00000555709 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
MTHFD1-211ENST00000555709 TNRQ92752 1358 aa18.14■□□□□ 0.49
MTHFD1-211ENST00000555709 SYNMO15061 1565 aa18.13■□□□□ 0.49
MTHFD1-211ENST00000555709 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
MTHFD1-211ENST00000555709 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.49
MTHFD1-211ENST00000555709 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
MTHFD1-211ENST00000555709 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
MTHFD1-211ENST00000555709 PZPP20742 1482 aa18.08■□□□□ 0.49
MTHFD1-211ENST00000555709 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
MTHFD1-211ENST00000555709 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
MTHFD1-211ENST00000555709 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
MTHFD1-211ENST00000555709 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
MTHFD1-211ENST00000555709 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
MTHFD1-211ENST00000555709 UGGT1Q9NYU2 1555 aa18.05■□□□□ 0.48
MTHFD1-211ENST00000555709 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
MTHFD1-211ENST00000555709 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
MTHFD1-211ENST00000555709 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
MTHFD1-211ENST00000555709 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
MTHFD1-211ENST00000555709 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
MTHFD1-211ENST00000555709 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
MTHFD1-211ENST00000555709 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
MTHFD1-211ENST00000555709 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
MTHFD1-211ENST00000555709 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
MTHFD1-211ENST00000555709 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
MTHFD1-211ENST00000555709 UPF1Q92900 1129 aaKnown RBP eCLIP18.01■□□□□ 0.47
MTHFD1-211ENST00000555709 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
MTHFD1-211ENST00000555709 KDM5DQ9BY66 1539 aa18■□□□□ 0.47
MTHFD1-211ENST00000555709 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
MTHFD1-211ENST00000555709 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
MTHFD1-211ENST00000555709 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
MTHFD1-211ENST00000555709 RTEL1-TNFRSF6BF6WH68 1400 aa17.94■□□□□ 0.46
MTHFD1-211ENST00000555709 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
MTHFD1-211ENST00000555709 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
MTHFD1-211ENST00000555709 KIF3BO15066 747 aa17.92■□□□□ 0.46
MTHFD1-211ENST00000555709 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
MTHFD1-211ENST00000555709 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
MTHFD1-211ENST00000555709 SCAF11Q99590 1463 aaKnown RBP17.88■□□□□ 0.45
MTHFD1-211ENST00000555709 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
MTHFD1-211ENST00000555709 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
MTHFD1-211ENST00000555709 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
MTHFD1-211ENST00000555709 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
MTHFD1-211ENST00000555709 CROCC2H7BZ55 1655 aa17.85■□□□□ 0.45
MTHFD1-211ENST00000555709 LTKP29376 864 aa17.85■□□□□ 0.45
MTHFD1-211ENST00000555709 TMEM94Q12767 1356 aa17.85■□□□□ 0.45
MTHFD1-211ENST00000555709 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
MTHFD1-211ENST00000555709 JCADQ9P266 1359 aa17.84■□□□□ 0.45
MTHFD1-211ENST00000555709 SLIT1O75093 1534 aa17.83■□□□□ 0.45
MTHFD1-211ENST00000555709 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
MTHFD1-211ENST00000555709 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
MTHFD1-211ENST00000555709 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
MTHFD1-211ENST00000555709 LRP6O75581 1613 aa17.82■□□□□ 0.44
MTHFD1-211ENST00000555709 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
MTHFD1-211ENST00000555709 DAPK1P53355 1430 aa17.81■□□□□ 0.44
MTHFD1-211ENST00000555709 TXNDC2Q86VQ3 553 aa17.8■□□□□ 0.44
MTHFD1-211ENST00000555709 ABCC3O15438 1527 aa17.8■□□□□ 0.44
MTHFD1-211ENST00000555709 CCDC141Q6ZP82 1450 aa17.8■□□□□ 0.44
MTHFD1-211ENST00000555709 ABCC5O15440 1437 aa17.79■□□□□ 0.44
MTHFD1-211ENST00000555709 ZNF772Q68DY9 489 aaPredicted RBP17.78■□□□□ 0.44
MTHFD1-211ENST00000555709 COL16A1Q07092 1604 aaPredicted RBP17.78■□□□□ 0.44
MTHFD1-211ENST00000555709 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
MTHFD1-211ENST00000555709 MAST1Q9Y2H9 1570 aa17.76■□□□□ 0.43
MTHFD1-211ENST00000555709 KCNA6P17658 529 aa17.75■□□□□ 0.43
MTHFD1-211ENST00000555709 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
MTHFD1-211ENST00000555709 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
MTHFD1-211ENST00000555709 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
MTHFD1-211ENST00000555709 RXRBP28702 533 aa17.73■□□□□ 0.43
MTHFD1-211ENST00000555709 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
MTHFD1-211ENST00000555709 PROSER2Q86WR7 435 aaPredicted RBP17.72■□□□□ 0.43
MTHFD1-211ENST00000555709 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
MTHFD1-211ENST00000555709 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.43
MTHFD1-211ENST00000555709 RSPH4AQ5TD94 716 aa17.71■□□□□ 0.43
MTHFD1-211ENST00000555709 MROH1Q8NDA8 1641 aa17.71■□□□□ 0.43
MTHFD1-211ENST00000555709 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
MTHFD1-211ENST00000555709 TET3O43151 1660 aa17.7■□□□□ 0.42
MTHFD1-211ENST00000555709 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
MTHFD1-211ENST00000555709 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
MTHFD1-211ENST00000555709 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
MTHFD1-211ENST00000555709 GCC2Q8IWJ2 1684 aa17.69■□□□□ 0.42
MTHFD1-211ENST00000555709 ITGAEP38570 1179 aa17.69■□□□□ 0.42
MTHFD1-211ENST00000555709 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
MTHFD1-211ENST00000555709 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
MTHFD1-211ENST00000555709 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms