RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 EIF2AK4Q9P2K8 1649 aaKnown RBP23.22■■□□□ 1.31
EFCAB11-207ENST00000555608 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
EFCAB11-207ENST00000555608 ZNF142P52746 1687 aaPredicted RBP23.21■■□□□ 1.31
EFCAB11-207ENST00000555608 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.3
EFCAB11-207ENST00000555608 ABCC5O15440 1437 aa23.2■■□□□ 1.3
EFCAB11-207ENST00000555608 DAPK1P53355 1430 aa23.19■■□□□ 1.3
EFCAB11-207ENST00000555608 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
EFCAB11-207ENST00000555608 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
EFCAB11-207ENST00000555608 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
EFCAB11-207ENST00000555608 PPP6R1Q9UPN7 881 aa23.16■■□□□ 1.3
EFCAB11-207ENST00000555608 DUOX2Q9NRD8 1548 aa23.16■■□□□ 1.3
EFCAB11-207ENST00000555608 CEP152O94986 1710 aa23.16■■□□□ 1.3
EFCAB11-207ENST00000555608 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
EFCAB11-207ENST00000555608 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.29
EFCAB11-207ENST00000555608 ABCC3O15438 1527 aa23.12■■□□□ 1.29
EFCAB11-207ENST00000555608 KIF15Q9NS87 1388 aa23.12■■□□□ 1.29
EFCAB11-207ENST00000555608 PZPP20742 1482 aa23.11■■□□□ 1.29
EFCAB11-207ENST00000555608 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
EFCAB11-207ENST00000555608 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
EFCAB11-207ENST00000555608 CERKQ8TCT0 537 aa23.1■■□□□ 1.29
EFCAB11-207ENST00000555608 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
EFCAB11-207ENST00000555608 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
EFCAB11-207ENST00000555608 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
EFCAB11-207ENST00000555608 ERBINQ96RT1 1412 aa23.07■■□□□ 1.28
EFCAB11-207ENST00000555608 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
EFCAB11-207ENST00000555608 PRDM15P57071 1507 aaPredicted RBP23.06■■□□□ 1.28
EFCAB11-207ENST00000555608 DEPDC5O75140 1603 aa23.05■■□□□ 1.28
EFCAB11-207ENST00000555608 TNRQ92752 1358 aa23.05■■□□□ 1.28
EFCAB11-207ENST00000555608 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
EFCAB11-207ENST00000555608 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
EFCAB11-207ENST00000555608 PTPRTO14522 1441 aa23.02■■□□□ 1.28
EFCAB11-207ENST00000555608 PPARGC1BQ86YN6 1023 aaKnown RBP23.02■■□□□ 1.28
EFCAB11-207ENST00000555608 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
EFCAB11-207ENST00000555608 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
EFCAB11-207ENST00000555608 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
EFCAB11-207ENST00000555608 PLA2R1Q13018 1463 aa23■■□□□ 1.27
EFCAB11-207ENST00000555608 SPATA31D1Q6ZQQ2 1576 aa23■■□□□ 1.27
EFCAB11-207ENST00000555608 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
EFCAB11-207ENST00000555608 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
EFCAB11-207ENST00000555608 ERVK-7P63135 1459 aa22.98■■□□□ 1.27
EFCAB11-207ENST00000555608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.95■■□□□ 1.26
EFCAB11-207ENST00000555608 NLRP1Q9C000 1473 aa22.94■■□□□ 1.26
EFCAB11-207ENST00000555608 UGGT1Q9NYU2 1555 aa22.93■■□□□ 1.26
EFCAB11-207ENST00000555608 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
EFCAB11-207ENST00000555608 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
EFCAB11-207ENST00000555608 LTBP4Q8N2S1 1624 aa22.91■■□□□ 1.26
EFCAB11-207ENST00000555608 KANK1Q14678 1352 aa22.89■■□□□ 1.25
EFCAB11-207ENST00000555608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.25
EFCAB11-207ENST00000555608 PKD2Q13563 968 aa22.88■■□□□ 1.25
EFCAB11-207ENST00000555608 ARHGAP31Q2M1Z3 1444 aa22.88■■□□□ 1.25
EFCAB11-207ENST00000555608 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
EFCAB11-207ENST00000555608 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
EFCAB11-207ENST00000555608 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
EFCAB11-207ENST00000555608 EFCAB6Q5THR3 1501 aa22.86■■□□□ 1.25
EFCAB11-207ENST00000555608 UNC13BO14795 1591 aa22.84■■□□□ 1.25
EFCAB11-207ENST00000555608 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.25
EFCAB11-207ENST00000555608 PIK3C2BO00750 1634 aa22.83■■□□□ 1.25
EFCAB11-207ENST00000555608 ITGAEP38570 1179 aa22.83■■□□□ 1.25
EFCAB11-207ENST00000555608 SYNMO15061 1565 aa22.81■■□□□ 1.24
EFCAB11-207ENST00000555608 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
EFCAB11-207ENST00000555608 ROCK1Q13464 1354 aa22.79■■□□□ 1.24
EFCAB11-207ENST00000555608 TET3O43151 1660 aa22.79■■□□□ 1.24
EFCAB11-207ENST00000555608 THEMISQ8N1K5 641 aaPredicted RBP22.79■■□□□ 1.24
EFCAB11-207ENST00000555608 GCC2Q8IWJ2 1684 aa22.78■■□□□ 1.24
EFCAB11-207ENST00000555608 NPHP4O75161 1426 aaPredicted RBP22.76■■□□□ 1.23
EFCAB11-207ENST00000555608 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
EFCAB11-207ENST00000555608 RRBP1Q9P2E9 1410 aaKnown RBP22.75■■□□□ 1.23
EFCAB11-207ENST00000555608 MED14O60244 1454 aa22.75■■□□□ 1.23
EFCAB11-207ENST00000555608 IQSEC2Q5JU85 1478 aa22.74■■□□□ 1.23
EFCAB11-207ENST00000555608 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
EFCAB11-207ENST00000555608 NOS1P29475 1434 aa22.73■■□□□ 1.23
EFCAB11-207ENST00000555608 E9PCH4 1651 aa22.72■■□□□ 1.23
EFCAB11-207ENST00000555608 SLIT1O75093 1534 aa22.72■■□□□ 1.23
EFCAB11-207ENST00000555608 ARHGAP23Q9P227 1491 aa22.71■■□□□ 1.23
EFCAB11-207ENST00000555608 KDM5AP29375 1690 aaKnown RBP22.71■■□□□ 1.23
EFCAB11-207ENST00000555608 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
EFCAB11-207ENST00000555608 ADGRB3O60242 1522 aa22.7■■□□□ 1.22
EFCAB11-207ENST00000555608 MYO5BQ9ULV0 1848 aa22.69■■□□□ 1.22
EFCAB11-207ENST00000555608 RPRD2Q5VT52 1461 aaKnown RBP22.69■■□□□ 1.22
EFCAB11-207ENST00000555608 STRCP1A6NGW2 1772 aa22.68■■□□□ 1.22
EFCAB11-207ENST00000555608 IDI1Q13907 227 aa22.66■■□□□ 1.22
EFCAB11-207ENST00000555608 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
EFCAB11-207ENST00000555608 CPS1P31327 1500 aa22.65■■□□□ 1.22
EFCAB11-207ENST00000555608 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
EFCAB11-207ENST00000555608 LTKP29376 864 aa22.63■■□□□ 1.21
EFCAB11-207ENST00000555608 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
EFCAB11-207ENST00000555608 NUP155O75694 1391 aa22.62■■□□□ 1.21
EFCAB11-207ENST00000555608 UBAP1LF5GYI3 381 aa22.61■■□□□ 1.21
EFCAB11-207ENST00000555608 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
EFCAB11-207ENST00000555608 TMEM131LA2VDJ0 1609 aa22.59■■□□□ 1.21
EFCAB11-207ENST00000555608 NAIPQ13075 1403 aa22.58■■□□□ 1.21
EFCAB11-207ENST00000555608 EID1Q9Y6B2 187 aa22.57■■□□□ 1.2
EFCAB11-207ENST00000555608 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
EFCAB11-207ENST00000555608 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
EFCAB11-207ENST00000555608 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.2
EFCAB11-207ENST00000555608 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
EFCAB11-207ENST00000555608 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
EFCAB11-207ENST00000555608 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
EFCAB11-207ENST00000555608 XIRP1Q702N8 1843 aaKnown RBP22.5■■□□□ 1.19
EFCAB11-207ENST00000555608 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms