RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 SHANK2Q9UPX8 1470 aa21.7■■□□□ 1.06
NME1-NME2-203ENST00000555572 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
NME1-NME2-203ENST00000555572 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
NME1-NME2-203ENST00000555572 GGT6Q6P531 493 aa21.68■■□□□ 1.06
NME1-NME2-203ENST00000555572 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
NME1-NME2-203ENST00000555572 ABCC5O15440 1437 aa21.67■■□□□ 1.06
NME1-NME2-203ENST00000555572 IQSEC2Q5JU85 1478 aa21.66■■□□□ 1.06
NME1-NME2-203ENST00000555572 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
NME1-NME2-203ENST00000555572 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
NME1-NME2-203ENST00000555572 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
NME1-NME2-203ENST00000555572 NCKAP5LQ9HCH0 1330 aa21.65■■□□□ 1.06
NME1-NME2-203ENST00000555572 DHX29Q7Z478 1369 aaKnown RBP21.63■■□□□ 1.05
NME1-NME2-203ENST00000555572 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
NME1-NME2-203ENST00000555572 PKD2Q13563 968 aa21.63■■□□□ 1.05
NME1-NME2-203ENST00000555572 PLA2R1Q13018 1463 aa21.63■■□□□ 1.05
NME1-NME2-203ENST00000555572 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
NME1-NME2-203ENST00000555572 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
NME1-NME2-203ENST00000555572 MYO3AQ8NEV4 1616 aa21.59■■□□□ 1.05
NME1-NME2-203ENST00000555572 CEP170BQ9Y4F5 1589 aaPredicted RBP21.58■■□□□ 1.05
NME1-NME2-203ENST00000555572 ZNF335Q9H4Z2 1342 aaPredicted RBP21.57■■□□□ 1.04
NME1-NME2-203ENST00000555572 ILDR2Q71H61 639 aa21.56■■□□□ 1.04
NME1-NME2-203ENST00000555572 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
NME1-NME2-203ENST00000555572 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
NME1-NME2-203ENST00000555572 DISP3Q9P2K9 1392 aa21.56■■□□□ 1.04
NME1-NME2-203ENST00000555572 ITGAEP38570 1179 aa21.55■■□□□ 1.04
NME1-NME2-203ENST00000555572 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
NME1-NME2-203ENST00000555572 A2ML1A8K2U0 1454 aa21.54■■□□□ 1.04
NME1-NME2-203ENST00000555572 KIF3BO15066 747 aa21.53■■□□□ 1.04
NME1-NME2-203ENST00000555572 CHIC2Q9UKJ5 165 aa21.52■■□□□ 1.04
NME1-NME2-203ENST00000555572 FBXO31Q5XUX0 539 aaPredicted RBP21.51■■□□□ 1.03
NME1-NME2-203ENST00000555572 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
NME1-NME2-203ENST00000555572 FAM135AQ9P2D6 1515 aa21.5■■□□□ 1.03
NME1-NME2-203ENST00000555572 TNRQ92752 1358 aa21.48■■□□□ 1.03
NME1-NME2-203ENST00000555572 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
NME1-NME2-203ENST00000555572 PZPP20742 1482 aa21.48■■□□□ 1.03
NME1-NME2-203ENST00000555572 GCC2Q8IWJ2 1684 aa21.47■■□□□ 1.03
NME1-NME2-203ENST00000555572 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
NME1-NME2-203ENST00000555572 WASHC2CQ9Y4E1 1318 aa21.46■■□□□ 1.03
NME1-NME2-203ENST00000555572 KDM5DQ9BY66 1539 aa21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 EIF2AK4Q9P2K8 1649 aaKnown RBP21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 SOCS7O14512 581 aa21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 RRP7BPQ9NSQ0 103 aa21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 HFM1A2PYH4 1435 aa21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
NME1-NME2-203ENST00000555572 SPATA31D1Q6ZQQ2 1576 aa21.41■■□□□ 1.02
NME1-NME2-203ENST00000555572 NEURL4Q96JN8 1562 aa21.4■■□□□ 1.02
NME1-NME2-203ENST00000555572 NAIPQ13075 1403 aa21.4■■□□□ 1.02
NME1-NME2-203ENST00000555572 ANKRD50Q9ULJ7 1429 aa21.4■■□□□ 1.02
NME1-NME2-203ENST00000555572 THEMISQ8N1K5 641 aaPredicted RBP21.4■■□□□ 1.02
NME1-NME2-203ENST00000555572 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
NME1-NME2-203ENST00000555572 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
NME1-NME2-203ENST00000555572 POLR1AO95602 1720 aaPredicted RBP21.36■■□□□ 1.01
NME1-NME2-203ENST00000555572 MED14O60244 1454 aa21.35■■□□□ 1.01
NME1-NME2-203ENST00000555572 RNF17Q9BXT8 1623 aaKnown RBP21.35■■□□□ 1.01
NME1-NME2-203ENST00000555572 SETD5Q9C0A6 1442 aa21.35■■□□□ 1.01
NME1-NME2-203ENST00000555572 CPS1P31327 1500 aa21.34■■□□□ 1.01
NME1-NME2-203ENST00000555572 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
NME1-NME2-203ENST00000555572 ABCC3O15438 1527 aa21.33■■□□□ 1
NME1-NME2-203ENST00000555572 DEPDC5O75140 1603 aa21.33■■□□□ 1
NME1-NME2-203ENST00000555572 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
NME1-NME2-203ENST00000555572 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
NME1-NME2-203ENST00000555572 NPHP4O75161 1426 aaPredicted RBP21.3■■□□□ 1
NME1-NME2-203ENST00000555572 TOM1O60784 492 aa21.3■■□□□ 1
NME1-NME2-203ENST00000555572 UNC13BO14795 1591 aa21.3■■□□□ 1
NME1-NME2-203ENST00000555572 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
NME1-NME2-203ENST00000555572 ERVK-7P63135 1459 aa21.27■■□□□ 1
NME1-NME2-203ENST00000555572 MROH1Q8NDA8 1641 aa21.27■■□□□ 1
NME1-NME2-203ENST00000555572 HSPA1LP34931 641 aa21.27■■□□□ 1
NME1-NME2-203ENST00000555572 ZC3H13Q5T200 1668 aaKnown RBP21.27■■□□□ 1
NME1-NME2-203ENST00000555572 HRCP23327 699 aa21.26■□□□□ 0.99
NME1-NME2-203ENST00000555572 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
NME1-NME2-203ENST00000555572 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
NME1-NME2-203ENST00000555572 KANK1Q14678 1352 aa21.24■□□□□ 0.99
NME1-NME2-203ENST00000555572 PIP4K2BP78356 416 aa21.24■□□□□ 0.99
NME1-NME2-203ENST00000555572 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
NME1-NME2-203ENST00000555572 IQGAP3Q86VI3 1631 aa21.21■□□□□ 0.99
NME1-NME2-203ENST00000555572 IQGAP1P46940 1657 aa21.21■□□□□ 0.99
NME1-NME2-203ENST00000555572 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
NME1-NME2-203ENST00000555572 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
NME1-NME2-203ENST00000555572 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
NME1-NME2-203ENST00000555572 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
NME1-NME2-203ENST00000555572 NUP155O75694 1391 aa21.18■□□□□ 0.98
NME1-NME2-203ENST00000555572 LRRC7Q96NW7 1537 aa21.18■□□□□ 0.98
NME1-NME2-203ENST00000555572 CEP152O94986 1710 aa21.18■□□□□ 0.98
NME1-NME2-203ENST00000555572 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
NME1-NME2-203ENST00000555572 LTKP29376 864 aa21.17■□□□□ 0.98
NME1-NME2-203ENST00000555572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.985e-8■■□□□ 12.4
NME1-NME2-203ENST00000555572 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
NME1-NME2-203ENST00000555572 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
NME1-NME2-203ENST00000555572 TET3O43151 1660 aa21.15■□□□□ 0.98
NME1-NME2-203ENST00000555572 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
NME1-NME2-203ENST00000555572 SLIT1O75093 1534 aa21.14■□□□□ 0.98
NME1-NME2-203ENST00000555572 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
NME1-NME2-203ENST00000555572 TXNDC2Q86VQ3 553 aa21.13■□□□□ 0.97
NME1-NME2-203ENST00000555572 MED1Q15648 1581 aaPredicted RBP21.12■□□□□ 0.97
NME1-NME2-203ENST00000555572 EFCAB6Q5THR3 1501 aa21.1■□□□□ 0.97
NME1-NME2-203ENST00000555572 SYNMO15061 1565 aa21.09■□□□□ 0.97
NME1-NME2-203ENST00000555572 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
NME1-NME2-203ENST00000555572 EID1Q9Y6B2 187 aa21.07■□□□□ 0.96
NME1-NME2-203ENST00000555572 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms