RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
PSEN1-213ENST00000555386 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
PSEN1-213ENST00000555386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.032e-7■□□□□ 10.6
PSEN1-213ENST00000555386 DUOX2Q9NRD8 1548 aa14.83□□□□□ -0.04
PSEN1-213ENST00000555386 ADAMTSL3P82987 1691 aa14.82□□□□□ -0.04
PSEN1-213ENST00000555386 AGLP35573 1532 aa14.82□□□□□ -0.04
PSEN1-213ENST00000555386 ADGRL2O95490 1459 aa14.82□□□□□ -0.04
PSEN1-213ENST00000555386 CLTCQ00610 1675 aaKnown RBP14.78□□□□□ -0.04
PSEN1-213ENST00000555386 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
PSEN1-213ENST00000555386 CEBPAP49715 358 aaPredicted RBP14.78□□□□□ -0.04
PSEN1-213ENST00000555386 ROCK1Q13464 1354 aa14.78□□□□□ -0.04
PSEN1-213ENST00000555386 CFAP65Q6ZU64 1925 aaKnown RBP14.78□□□□□ -0.04
PSEN1-213ENST00000555386 ERBINQ96RT1 1412 aa14.77□□□□□ -0.04
PSEN1-213ENST00000555386 ANKRD50Q9ULJ7 1429 aa14.77□□□□□ -0.04
PSEN1-213ENST00000555386 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.05
PSEN1-213ENST00000555386 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
PSEN1-213ENST00000555386 PTPRMP28827 1452 aa14.75□□□□□ -0.05
PSEN1-213ENST00000555386 CEP152O94986 1710 aa14.74□□□□□ -0.05
PSEN1-213ENST00000555386 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
PSEN1-213ENST00000555386 NAIPQ13075 1403 aa14.72□□□□□ -0.05
PSEN1-213ENST00000555386 MROH1Q8NDA8 1641 aa14.72□□□□□ -0.05
PSEN1-213ENST00000555386 C3P01024 1663 aa14.71□□□□□ -0.05
PSEN1-213ENST00000555386 GCC2Q8IWJ2 1684 aa14.71□□□□□ -0.05
PSEN1-213ENST00000555386 KANK1Q14678 1352 aa14.71□□□□□ -0.05
PSEN1-213ENST00000555386 TRIM52Q96A61 297 aa14.7□□□□□ -0.06
PSEN1-213ENST00000555386 ZMYM3Q14202 1370 aa14.7□□□□□ -0.06
PSEN1-213ENST00000555386 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
PSEN1-213ENST00000555386 CNTLNQ9NXG0 1405 aa14.69□□□□□ -0.06
PSEN1-213ENST00000555386 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
PSEN1-213ENST00000555386 HFM1A2PYH4 1435 aa14.69□□□□□ -0.06
PSEN1-213ENST00000555386 ABCC3O15438 1527 aa14.68□□□□□ -0.06
PSEN1-213ENST00000555386 PRDM15P57071 1507 aaPredicted RBP14.68□□□□□ -0.06
PSEN1-213ENST00000555386 MROH2AA6NES4 1674 aa14.67□□□□□ -0.06
PSEN1-213ENST00000555386 NUP155O75694 1391 aa14.67□□□□□ -0.06
PSEN1-213ENST00000555386 FBXO31Q5XUX0 539 aaPredicted RBP14.66□□□□□ -0.06
PSEN1-213ENST00000555386 CAMSAP1Q5T5Y3 1602 aa14.66□□□□□ -0.06
PSEN1-213ENST00000555386 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
PSEN1-213ENST00000555386 UNC13BO14795 1591 aa14.65□□□□□ -0.06
PSEN1-213ENST00000555386 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
PSEN1-213ENST00000555386 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
PSEN1-213ENST00000555386 SETD1BQ9UPS6 1966 aaKnown RBP14.63□□□□□ -0.07
PSEN1-213ENST00000555386 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
PSEN1-213ENST00000555386 RAB3GAP2Q9H2M9 1393 aa14.61□□□□□ -0.07
PSEN1-213ENST00000555386 VWDEQ8N2E2 1590 aa14.61□□□□□ -0.07
PSEN1-213ENST00000555386 FAM135AQ9P2D6 1515 aa14.61□□□□□ -0.07
PSEN1-213ENST00000555386 IQGAP3Q86VI3 1631 aa14.6□□□□□ -0.07
PSEN1-213ENST00000555386 PZPP20742 1482 aa14.6□□□□□ -0.07
PSEN1-213ENST00000555386 TET3O43151 1660 aa14.59□□□□□ -0.07
PSEN1-213ENST00000555386 NPATQ14207 1427 aa14.59□□□□□ -0.07
PSEN1-213ENST00000555386 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
PSEN1-213ENST00000555386 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
PSEN1-213ENST00000555386 TNRQ92752 1358 aa14.58□□□□□ -0.08
PSEN1-213ENST00000555386 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
PSEN1-213ENST00000555386 HSPA2P54652 639 aa14.57□□□□□ -0.08
PSEN1-213ENST00000555386 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
PSEN1-213ENST00000555386 E9PCH4 1651 aa14.57□□□□□ -0.08
PSEN1-213ENST00000555386 UHRF1BP1Q6BDS2 1440 aa14.56□□□□□ -0.08
PSEN1-213ENST00000555386 ERVK-7P63135 1459 aa14.56□□□□□ -0.08
PSEN1-213ENST00000555386 PKD2Q13563 968 aa14.55□□□□□ -0.08
PSEN1-213ENST00000555386 MYO3AQ8NEV4 1616 aa14.55□□□□□ -0.08
PSEN1-213ENST00000555386 ARHGAP31Q2M1Z3 1444 aa14.54□□□□□ -0.08
PSEN1-213ENST00000555386 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
PSEN1-213ENST00000555386 LMTK3Q96Q04 1460 aa14.53□□□□□ -0.08
PSEN1-213ENST00000555386 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.08
PSEN1-213ENST00000555386 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.09
PSEN1-213ENST00000555386 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
PSEN1-213ENST00000555386 SYNMO15061 1565 aa14.51□□□□□ -0.09
PSEN1-213ENST00000555386 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
PSEN1-213ENST00000555386 CEP170BQ9Y4F5 1589 aaPredicted RBP14.5□□□□□ -0.09
PSEN1-213ENST00000555386 UGGT1Q9NYU2 1555 aa14.49□□□□□ -0.09
PSEN1-213ENST00000555386 SPHKAPQ2M3C7 1700 aa14.49□□□□□ -0.09
PSEN1-213ENST00000555386 RPRD2Q5VT52 1461 aaKnown RBP14.49□□□□□ -0.09
PSEN1-213ENST00000555386 IDI1Q13907 227 aa14.48□□□□□ -0.09
PSEN1-213ENST00000555386 NOS1P29475 1434 aa14.48□□□□□ -0.09
PSEN1-213ENST00000555386 PIK3C2BO00750 1634 aa14.47□□□□□ -0.09
PSEN1-213ENST00000555386 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
PSEN1-213ENST00000555386 MYO5BQ9ULV0 1848 aa14.47□□□□□ -0.09
PSEN1-213ENST00000555386 ZNF142P52746 1687 aaPredicted RBP14.47□□□□□ -0.09
PSEN1-213ENST00000555386 NLRP1Q9C000 1473 aa14.47□□□□□ -0.09
PSEN1-213ENST00000555386 ACIN1Q9UKV3 1341 aaKnown RBP14.44□□□□□ -0.1
PSEN1-213ENST00000555386 UBR1Q8IWV7 1749 aa14.44□□□□□ -0.1
PSEN1-213ENST00000555386 THEMISQ8N1K5 641 aaPredicted RBP14.44□□□□□ -0.1
PSEN1-213ENST00000555386 SLC52A1Q9NWF4 448 aa14.44□□□□□ -0.1
PSEN1-213ENST00000555386 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
PSEN1-213ENST00000555386 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
PSEN1-213ENST00000555386 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
PSEN1-213ENST00000555386 ZNF326Q5BKZ1 582 aaKnown RBP14.41□□□□□ -0.1
PSEN1-213ENST00000555386 NUTM2DQ5VT03 806 aaPredicted RBP14.41□□□□□ -0.1
PSEN1-213ENST00000555386 PTPRTO14522 1441 aa14.41□□□□□ -0.1
PSEN1-213ENST00000555386 TRPM2O94759 1503 aa14.4□□□□□ -0.1
PSEN1-213ENST00000555386 KIF1BO60333 1816 aa14.4□□□□□ -0.1
PSEN1-213ENST00000555386 STRCQ7RTU9 1775 aa14.4□□□□□ -0.1
PSEN1-213ENST00000555386 ADGRB3O60242 1522 aa14.4□□□□□ -0.1
PSEN1-213ENST00000555386 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
PSEN1-213ENST00000555386 TMEM131LA2VDJ0 1609 aa14.38□□□□□ -0.11
PSEN1-213ENST00000555386 CCDC144AA2RUR9 1427 aa14.38□□□□□ -0.11
PSEN1-213ENST00000555386 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
PSEN1-213ENST00000555386 ANKLE2Q86XL3 938 aa14.38□□□□□ -0.11
PSEN1-213ENST00000555386 POLR1AO95602 1720 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-213ENST00000555386 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms