RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-219ENST00000555309 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
HNRNPC-219ENST00000555309 DNMT1P26358 1616 aaKnown RBP15.49■□□□□ 0.07
HNRNPC-219ENST00000555309 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
HNRNPC-219ENST00000555309 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
HNRNPC-219ENST00000555309 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
HNRNPC-219ENST00000555309 NPATQ14207 1427 aa15.48■□□□□ 0.07
HNRNPC-219ENST00000555309 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
HNRNPC-219ENST00000555309 KDM5DQ9BY66 1539 aa15.46■□□□□ 0.07
HNRNPC-219ENST00000555309 MROH1Q8NDA8 1641 aa15.46■□□□□ 0.07
HNRNPC-219ENST00000555309 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.06
HNRNPC-219ENST00000555309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.062e-26■■□□□ 11.8
HNRNPC-219ENST00000555309 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-219ENST00000555309 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
HNRNPC-219ENST00000555309 NCOA1Q15788 1441 aa15.44■□□□□ 0.06
HNRNPC-219ENST00000555309 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
HNRNPC-219ENST00000555309 ABCC3O15438 1527 aa15.43■□□□□ 0.06
HNRNPC-219ENST00000555309 PZPP20742 1482 aa15.42■□□□□ 0.06
HNRNPC-219ENST00000555309 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
HNRNPC-219ENST00000555309 ITGAEP38570 1179 aa15.42■□□□□ 0.06
HNRNPC-219ENST00000555309 EIF2AK4Q9P2K8 1649 aaKnown RBP15.41■□□□□ 0.06
HNRNPC-219ENST00000555309 TNRQ92752 1358 aa15.41■□□□□ 0.06
HNRNPC-219ENST00000555309 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
HNRNPC-219ENST00000555309 CEP170BQ9Y4F5 1589 aaPredicted RBP15.4■□□□□ 0.06
HNRNPC-219ENST00000555309 CEP152O94986 1710 aa15.4■□□□□ 0.06
HNRNPC-219ENST00000555309 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
HNRNPC-219ENST00000555309 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.05
HNRNPC-219ENST00000555309 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
HNRNPC-219ENST00000555309 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
HNRNPC-219ENST00000555309 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
HNRNPC-219ENST00000555309 FAM135AQ9P2D6 1515 aa15.36■□□□□ 0.05
HNRNPC-219ENST00000555309 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-219ENST00000555309 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
HNRNPC-219ENST00000555309 PRDM15P57071 1507 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-219ENST00000555309 CERKQ8TCT0 537 aa15.35■□□□□ 0.05
HNRNPC-219ENST00000555309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.052e-10■□□□□ 8.9
HNRNPC-219ENST00000555309 PTPRTO14522 1441 aa15.34■□□□□ 0.05
HNRNPC-219ENST00000555309 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
HNRNPC-219ENST00000555309 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
HNRNPC-219ENST00000555309 ZC3H13Q5T200 1668 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-219ENST00000555309 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.04
HNRNPC-219ENST00000555309 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
HNRNPC-219ENST00000555309 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
HNRNPC-219ENST00000555309 PLA2R1Q13018 1463 aa15.31■□□□□ 0.04
HNRNPC-219ENST00000555309 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
HNRNPC-219ENST00000555309 ZNF335Q9H4Z2 1342 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-219ENST00000555309 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
HNRNPC-219ENST00000555309 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
HNRNPC-219ENST00000555309 PKD2Q13563 968 aa15.29■□□□□ 0.04
HNRNPC-219ENST00000555309 KANK1Q14678 1352 aa15.29■□□□□ 0.04
HNRNPC-219ENST00000555309 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
HNRNPC-219ENST00000555309 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
HNRNPC-219ENST00000555309 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
HNRNPC-219ENST00000555309 THEMISQ8N1K5 641 aaPredicted RBP15.28■□□□□ 0.04
HNRNPC-219ENST00000555309 ROCK1Q13464 1354 aa15.27■□□□□ 0.04
HNRNPC-219ENST00000555309 NEURL4Q96JN8 1562 aa15.27■□□□□ 0.03
HNRNPC-219ENST00000555309 LMTK2Q8IWU2 1503 aa15.26■□□□□ 0.03
HNRNPC-219ENST00000555309 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-219ENST00000555309 IDI1Q13907 227 aa15.26■□□□□ 0.03
HNRNPC-219ENST00000555309 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
HNRNPC-219ENST00000555309 SYNMO15061 1565 aa15.23■□□□□ 0.03
HNRNPC-219ENST00000555309 LTKP29376 864 aa15.23■□□□□ 0.03
HNRNPC-219ENST00000555309 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
HNRNPC-219ENST00000555309 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
HNRNPC-219ENST00000555309 PIK3C2BO00750 1634 aa15.22■□□□□ 0.03
HNRNPC-219ENST00000555309 NOS1P29475 1434 aa15.22■□□□□ 0.03
HNRNPC-219ENST00000555309 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
HNRNPC-219ENST00000555309 UNC13BO14795 1591 aa15.2■□□□□ 0.02
HNRNPC-219ENST00000555309 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
HNRNPC-219ENST00000555309 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
HNRNPC-219ENST00000555309 NUP155O75694 1391 aa15.2■□□□□ 0.02
HNRNPC-219ENST00000555309 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
HNRNPC-219ENST00000555309 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
HNRNPC-219ENST00000555309 MED14O60244 1454 aa15.18■□□□□ 0.02
HNRNPC-219ENST00000555309 TET3O43151 1660 aa15.17■□□□□ 0.02
HNRNPC-219ENST00000555309 NAIPQ13075 1403 aa15.17■□□□□ 0.02
HNRNPC-219ENST00000555309 ARHGAP23Q9P227 1491 aa15.17■□□□□ 0.02
HNRNPC-219ENST00000555309 E9PCH4 1651 aa15.16■□□□□ 0.02
HNRNPC-219ENST00000555309 TMEM2Q9UHN6 1383 aa15.15■□□□□ 0.02
HNRNPC-219ENST00000555309 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
HNRNPC-219ENST00000555309 SLIT1O75093 1534 aa15.15■□□□□ 0.02
HNRNPC-219ENST00000555309 HRCP23327 699 aa15.14■□□□□ 0.01
HNRNPC-219ENST00000555309 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-219ENST00000555309 IQGAP1P46940 1657 aa15.14■□□□□ 0.01
HNRNPC-219ENST00000555309 SLC52A1Q9NWF4 448 aa15.14■□□□□ 0.01
HNRNPC-219ENST00000555309 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
HNRNPC-219ENST00000555309 RPRD2Q5VT52 1461 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-219ENST00000555309 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-219ENST00000555309 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
HNRNPC-219ENST00000555309 STRCP1A6NGW2 1772 aa15.12■□□□□ 0.01
HNRNPC-219ENST00000555309 EID1Q9Y6B2 187 aa15.12■□□□□ 0.01
HNRNPC-219ENST00000555309 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
HNRNPC-219ENST00000555309 ADGRB3O60242 1522 aa15.11■□□□□ 0.01
HNRNPC-219ENST00000555309 SLC26A8Q96RN1 970 aa15.11■□□□□ 0.01
HNRNPC-219ENST00000555309 UBAP1LF5GYI3 381 aa15.09■□□□□ 0.01
HNRNPC-219ENST00000555309 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
HNRNPC-219ENST00000555309 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
HNRNPC-219ENST00000555309 TMEM131LA2VDJ0 1609 aa15.08■□□□□ 0
HNRNPC-219ENST00000555309 IQSEC2Q5JU85 1478 aa15.07■□□□□ 0
HNRNPC-219ENST00000555309 RBM33Q96EV2 1170 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms