RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 LMTK3Q96Q04 1460 aa19.1■□□□□ 0.65
TRAPPC6B-205ENST00000555269 WASHC2CQ9Y4E1 1318 aa19.1■□□□□ 0.65
TRAPPC6B-205ENST00000555269 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
TRAPPC6B-205ENST00000555269 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
TRAPPC6B-205ENST00000555269 ITGAEP38570 1179 aa19.07■□□□□ 0.64
TRAPPC6B-205ENST00000555269 FBXO31Q5XUX0 539 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC6B-205ENST00000555269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
TRAPPC6B-205ENST00000555269 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
TRAPPC6B-205ENST00000555269 C3P01024 1663 aa19.05■□□□□ 0.64
TRAPPC6B-205ENST00000555269 DNMT1P26358 1616 aaKnown RBP19.04■□□□□ 0.64
TRAPPC6B-205ENST00000555269 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
TRAPPC6B-205ENST00000555269 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
TRAPPC6B-205ENST00000555269 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
TRAPPC6B-205ENST00000555269 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
TRAPPC6B-205ENST00000555269 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
TRAPPC6B-205ENST00000555269 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
TRAPPC6B-205ENST00000555269 SETD1BQ9UPS6 1966 aaKnown RBP19■□□□□ 0.63
TRAPPC6B-205ENST00000555269 NPATQ14207 1427 aa18.99■□□□□ 0.63
TRAPPC6B-205ENST00000555269 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
TRAPPC6B-205ENST00000555269 MROH2AA6NES4 1674 aa18.96■□□□□ 0.63
TRAPPC6B-205ENST00000555269 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
TRAPPC6B-205ENST00000555269 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
TRAPPC6B-205ENST00000555269 ADGRL2O95490 1459 aa18.94■□□□□ 0.62
TRAPPC6B-205ENST00000555269 PREX1Q8TCU6 1659 aa18.94■□□□□ 0.62
TRAPPC6B-205ENST00000555269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAPPC6B-205ENST00000555269 TNRQ92752 1358 aa18.92■□□□□ 0.62
TRAPPC6B-205ENST00000555269 ABCC3O15438 1527 aa18.91■□□□□ 0.62
TRAPPC6B-205ENST00000555269 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
TRAPPC6B-205ENST00000555269 RNF17Q9BXT8 1623 aaKnown RBP18.91■□□□□ 0.62
TRAPPC6B-205ENST00000555269 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
TRAPPC6B-205ENST00000555269 PZPP20742 1482 aa18.9■□□□□ 0.62
TRAPPC6B-205ENST00000555269 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
TRAPPC6B-205ENST00000555269 NCKAP5LQ9HCH0 1330 aa18.9■□□□□ 0.62
TRAPPC6B-205ENST00000555269 KANK1Q14678 1352 aa18.89■□□□□ 0.61
TRAPPC6B-205ENST00000555269 RRBP1Q9P2E9 1410 aaKnown RBP18.89■□□□□ 0.61
TRAPPC6B-205ENST00000555269 ROCK1Q13464 1354 aa18.88■□□□□ 0.61
TRAPPC6B-205ENST00000555269 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
TRAPPC6B-205ENST00000555269 FAM135AQ9P2D6 1515 aa18.86■□□□□ 0.61
TRAPPC6B-205ENST00000555269 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC6B-205ENST00000555269 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
TRAPPC6B-205ENST00000555269 CEP152O94986 1710 aa18.82■□□□□ 0.6
TRAPPC6B-205ENST00000555269 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
TRAPPC6B-205ENST00000555269 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
TRAPPC6B-205ENST00000555269 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
TRAPPC6B-205ENST00000555269 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC6B-205ENST00000555269 ERVK-7P63135 1459 aa18.81■□□□□ 0.6
TRAPPC6B-205ENST00000555269 ARHGAP31Q2M1Z3 1444 aa18.81■□□□□ 0.6
TRAPPC6B-205ENST00000555269 MYO3AQ8NEV4 1616 aa18.8■□□□□ 0.6
TRAPPC6B-205ENST00000555269 CEP170BQ9Y4F5 1589 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC6B-205ENST00000555269 DEPDC5O75140 1603 aa18.79■□□□□ 0.6
TRAPPC6B-205ENST00000555269 PKD2Q13563 968 aa18.79■□□□□ 0.6
TRAPPC6B-205ENST00000555269 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
TRAPPC6B-205ENST00000555269 IDI1Q13907 227 aa18.78■□□□□ 0.6
TRAPPC6B-205ENST00000555269 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
TRAPPC6B-205ENST00000555269 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC6B-205ENST00000555269 NUP155O75694 1391 aa18.77■□□□□ 0.6
TRAPPC6B-205ENST00000555269 NLRP1Q9C000 1473 aa18.77■□□□□ 0.59
TRAPPC6B-205ENST00000555269 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
TRAPPC6B-205ENST00000555269 ANKLE2Q86XL3 938 aa18.76■□□□□ 0.59
TRAPPC6B-205ENST00000555269 PTPRTO14522 1441 aa18.75■□□□□ 0.59
TRAPPC6B-205ENST00000555269 LMTK2Q8IWU2 1503 aa18.75■□□□□ 0.59
TRAPPC6B-205ENST00000555269 CERKQ8TCT0 537 aa18.73■□□□□ 0.59
TRAPPC6B-205ENST00000555269 NAIPQ13075 1403 aa18.73■□□□□ 0.59
TRAPPC6B-205ENST00000555269 ZNF142P52746 1687 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC6B-205ENST00000555269 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
TRAPPC6B-205ENST00000555269 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
TRAPPC6B-205ENST00000555269 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
TRAPPC6B-205ENST00000555269 LTKP29376 864 aa18.7■□□□□ 0.58
TRAPPC6B-205ENST00000555269 NOS1P29475 1434 aa18.7■□□□□ 0.58
TRAPPC6B-205ENST00000555269 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
TRAPPC6B-205ENST00000555269 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
TRAPPC6B-205ENST00000555269 SLC52A1Q9NWF4 448 aa18.69■□□□□ 0.58
TRAPPC6B-205ENST00000555269 EFCAB6Q5THR3 1501 aa18.68■□□□□ 0.58
TRAPPC6B-205ENST00000555269 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC6B-205ENST00000555269 UNC13BO14795 1591 aa18.67■□□□□ 0.58
TRAPPC6B-205ENST00000555269 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
TRAPPC6B-205ENST00000555269 FBXO41Q8TF61 875 aa18.65■□□□□ 0.58
TRAPPC6B-205ENST00000555269 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
TRAPPC6B-205ENST00000555269 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
TRAPPC6B-205ENST00000555269 SYNMO15061 1565 aa18.64■□□□□ 0.57
TRAPPC6B-205ENST00000555269 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
TRAPPC6B-205ENST00000555269 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
TRAPPC6B-205ENST00000555269 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC6B-205ENST00000555269 TET3O43151 1660 aa18.62■□□□□ 0.57
TRAPPC6B-205ENST00000555269 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
TRAPPC6B-205ENST00000555269 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
TRAPPC6B-205ENST00000555269 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
TRAPPC6B-205ENST00000555269 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
TRAPPC6B-205ENST00000555269 NEURL4Q96JN8 1562 aa18.59■□□□□ 0.57
TRAPPC6B-205ENST00000555269 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
TRAPPC6B-205ENST00000555269 LTBP4Q8N2S1 1624 aa18.59■□□□□ 0.57
TRAPPC6B-205ENST00000555269 MED14O60244 1454 aa18.58■□□□□ 0.57
TRAPPC6B-205ENST00000555269 E9PCH4 1651 aa18.58■□□□□ 0.57
TRAPPC6B-205ENST00000555269 NUTM2DQ5VT03 806 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC6B-205ENST00000555269 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.56
TRAPPC6B-205ENST00000555269 SLIT1O75093 1534 aa18.56■□□□□ 0.56
TRAPPC6B-205ENST00000555269 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
TRAPPC6B-205ENST00000555269 GCC2Q8IWJ2 1684 aa18.56■□□□□ 0.56
TRAPPC6B-205ENST00000555269 BCANQ96GW7 911 aa18.55■□□□□ 0.56
TRAPPC6B-205ENST00000555269 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms