RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 MAST1Q9Y2H9 1570 aa26.14■■□□□ 1.78
PSEN1-212ENST00000555254 PLXNC1O60486 1568 aa26.13■■□□□ 1.77
PSEN1-212ENST00000555254 DNMT1P26358 1616 aaKnown RBP26.12■■□□□ 1.77
PSEN1-212ENST00000555254 SHANK2Q9UPX8 1470 aa26.11■■□□□ 1.77
PSEN1-212ENST00000555254 PTPRKQ15262 1439 aa26.11■■□□□ 1.77
PSEN1-212ENST00000555254 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
PSEN1-212ENST00000555254 FER1L4A9Z1Z3 1794 aa26.1■■□□□ 1.77
PSEN1-212ENST00000555254 ANKRD30AQ9BXX3 1397 aa26.09■■□□□ 1.77
PSEN1-212ENST00000555254 HRCP23327 699 aa26.09■■□□□ 1.77
PSEN1-212ENST00000555254 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
PSEN1-212ENST00000555254 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
PSEN1-212ENST00000555254 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
PSEN1-212ENST00000555254 RAB3GAP2Q9H2M9 1393 aa26.05■■□□□ 1.76
PSEN1-212ENST00000555254 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
PSEN1-212ENST00000555254 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
PSEN1-212ENST00000555254 NCOA1Q15788 1441 aa26.03■■□□□ 1.76
PSEN1-212ENST00000555254 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
PSEN1-212ENST00000555254 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
PSEN1-212ENST00000555254 ACIN1Q9UKV3 1341 aaKnown RBP26.02■■□□□ 1.76
PSEN1-212ENST00000555254 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
PSEN1-212ENST00000555254 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
PSEN1-212ENST00000555254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26■■□□□ 1.752e-7■□□□□ 10.6
PSEN1-212ENST00000555254 NAIPQ13075 1403 aa25.98■■□□□ 1.75
PSEN1-212ENST00000555254 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
PSEN1-212ENST00000555254 ERBINQ96RT1 1412 aa25.95■■□□□ 1.74
PSEN1-212ENST00000555254 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
PSEN1-212ENST00000555254 C3P01024 1663 aa25.9■■□□□ 1.74
PSEN1-212ENST00000555254 ANKRD50Q9ULJ7 1429 aa25.89■■□□□ 1.74
PSEN1-212ENST00000555254 EIF2AK4Q9P2K8 1649 aaKnown RBP25.89■■□□□ 1.74
PSEN1-212ENST00000555254 FBXO31Q5XUX0 539 aaPredicted RBP25.88■■□□□ 1.73
PSEN1-212ENST00000555254 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
PSEN1-212ENST00000555254 TRIM52Q96A61 297 aa25.87■■□□□ 1.73
PSEN1-212ENST00000555254 KANK1Q14678 1352 aa25.86■■□□□ 1.73
PSEN1-212ENST00000555254 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
PSEN1-212ENST00000555254 DHX57Q6P158 1386 aaKnown RBP25.85■■□□□ 1.73
PSEN1-212ENST00000555254 MROH2AA6NES4 1674 aa25.84■■□□□ 1.73
PSEN1-212ENST00000555254 GCC2Q8IWJ2 1684 aa25.84■■□□□ 1.73
PSEN1-212ENST00000555254 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
PSEN1-212ENST00000555254 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
PSEN1-212ENST00000555254 ABCC3O15438 1527 aa25.82■■□□□ 1.72
PSEN1-212ENST00000555254 NPATQ14207 1427 aa25.81■■□□□ 1.72
PSEN1-212ENST00000555254 STRCQ7RTU9 1775 aa25.81■■□□□ 1.72
PSEN1-212ENST00000555254 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
PSEN1-212ENST00000555254 FAM135AQ9P2D6 1515 aa25.8■■□□□ 1.72
PSEN1-212ENST00000555254 PZPP20742 1482 aa25.77■■□□□ 1.72
PSEN1-212ENST00000555254 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
PSEN1-212ENST00000555254 TNRQ92752 1358 aa25.75■■□□□ 1.71
PSEN1-212ENST00000555254 PREX1Q8TCU6 1659 aa25.74■■□□□ 1.71
PSEN1-212ENST00000555254 DEPDC5O75140 1603 aa25.72■■□□□ 1.71
PSEN1-212ENST00000555254 ZC3H13Q5T200 1668 aaKnown RBP25.71■■□□□ 1.71
PSEN1-212ENST00000555254 CEP152O94986 1710 aa25.71■■□□□ 1.71
PSEN1-212ENST00000555254 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
PSEN1-212ENST00000555254 NUP155O75694 1391 aa25.69■■□□□ 1.7
PSEN1-212ENST00000555254 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
PSEN1-212ENST00000555254 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
PSEN1-212ENST00000555254 ARHGAP31Q2M1Z3 1444 aa25.65■■□□□ 1.7
PSEN1-212ENST00000555254 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
PSEN1-212ENST00000555254 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
PSEN1-212ENST00000555254 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
PSEN1-212ENST00000555254 LMTK2Q8IWU2 1503 aa25.63■■□□□ 1.69
PSEN1-212ENST00000555254 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
PSEN1-212ENST00000555254 UNC13BO14795 1591 aa25.61■■□□□ 1.69
PSEN1-212ENST00000555254 A2ML1A8K2U0 1454 aa25.6■■□□□ 1.69
PSEN1-212ENST00000555254 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
PSEN1-212ENST00000555254 LTBP4Q8N2S1 1624 aa25.59■■□□□ 1.69
PSEN1-212ENST00000555254 DMRT2Q9Y5R5 561 aa25.59■■□□□ 1.69
PSEN1-212ENST00000555254 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
PSEN1-212ENST00000555254 THEMISQ8N1K5 641 aaPredicted RBP25.57■■□□□ 1.68
PSEN1-212ENST00000555254 NLRP1Q9C000 1473 aa25.57■■□□□ 1.68
PSEN1-212ENST00000555254 EFCAB6Q5THR3 1501 aa25.57■■□□□ 1.68
PSEN1-212ENST00000555254 STAG3Q9UJ98 1225 aa25.55■■□□□ 1.68
PSEN1-212ENST00000555254 CFAP65Q6ZU64 1925 aaKnown RBP25.55■■□□□ 1.68
PSEN1-212ENST00000555254 IDI1Q13907 227 aa25.53■■□□□ 1.68
PSEN1-212ENST00000555254 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
PSEN1-212ENST00000555254 PKD2Q13563 968 aa25.51■■□□□ 1.67
PSEN1-212ENST00000555254 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
PSEN1-212ENST00000555254 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
PSEN1-212ENST00000555254 TET3O43151 1660 aa25.51■■□□□ 1.67
PSEN1-212ENST00000555254 ZNF142P52746 1687 aaPredicted RBP25.5■■□□□ 1.67
PSEN1-212ENST00000555254 IQSEC2Q5JU85 1478 aa25.5■■□□□ 1.67
PSEN1-212ENST00000555254 RPRD2Q5VT52 1461 aaKnown RBP25.5■■□□□ 1.67
PSEN1-212ENST00000555254 NOS1P29475 1434 aa25.49■■□□□ 1.67
PSEN1-212ENST00000555254 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
PSEN1-212ENST00000555254 ANKLE2Q86XL3 938 aa25.48■■□□□ 1.67
PSEN1-212ENST00000555254 SIN3AQ96ST3 1273 aa25.48■■□□□ 1.67
PSEN1-212ENST00000555254 PTPRTO14522 1441 aa25.47■■□□□ 1.67
PSEN1-212ENST00000555254 TIMELESSQ9UNS1 1208 aa25.47■■□□□ 1.67
PSEN1-212ENST00000555254 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
PSEN1-212ENST00000555254 FOXD1Q16676 465 aa25.45■■□□□ 1.66
PSEN1-212ENST00000555254 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
PSEN1-212ENST00000555254 SYNMO15061 1565 aa25.44■■□□□ 1.66
PSEN1-212ENST00000555254 E9PCH4 1651 aa25.42■■□□□ 1.66
PSEN1-212ENST00000555254 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
PSEN1-212ENST00000555254 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
PSEN1-212ENST00000555254 MED1Q15648 1581 aaPredicted RBP25.39■■□□□ 1.65
PSEN1-212ENST00000555254 PIK3C2BO00750 1634 aa25.38■■□□□ 1.65
PSEN1-212ENST00000555254 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
PSEN1-212ENST00000555254 TONSLQ96HA7 1378 aa25.37■■□□□ 1.65
PSEN1-212ENST00000555254 LTKP29376 864 aa25.35■■□□□ 1.65
PSEN1-212ENST00000555254 UBR1Q8IWV7 1749 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms