RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 ABCC5O15440 1437 aa33.51■■■□□ 2.95
SYNE2-218ENST00000555241 DAPK1P53355 1430 aa33.48■■■□□ 2.95
SYNE2-218ENST00000555241 PTPRKQ15262 1439 aa33.48■■■□□ 2.95
SYNE2-218ENST00000555241 STRCQ7RTU9 1775 aa33.48■■■□□ 2.95
SYNE2-218ENST00000555241 DUOX2Q9NRD8 1548 aa33.48■■■□□ 2.95
SYNE2-218ENST00000555241 MYO3AQ8NEV4 1616 aa33.46■■■□□ 2.95
SYNE2-218ENST00000555241 ZNF142P52746 1687 aaPredicted RBP33.45■■■□□ 2.94
SYNE2-218ENST00000555241 ZC3H13Q5T200 1668 aaKnown RBP33.43■■■□□ 2.94
SYNE2-218ENST00000555241 KIF15Q9NS87 1388 aa33.4■■■□□ 2.94
SYNE2-218ENST00000555241 WASHC2CQ9Y4E1 1318 aa33.4■■■□□ 2.94
SYNE2-218ENST00000555241 PZPP20742 1482 aa33.38■■■□□ 2.93
SYNE2-218ENST00000555241 MROH1Q8NDA8 1641 aa33.38■■■□□ 2.93
SYNE2-218ENST00000555241 CEP170BQ9Y4F5 1589 aaPredicted RBP33.36■■■□□ 2.93
SYNE2-218ENST00000555241 ERBINQ96RT1 1412 aa33.36■■■□□ 2.93
SYNE2-218ENST00000555241 ABCC3O15438 1527 aa33.33■■■□□ 2.93
SYNE2-218ENST00000555241 CEP152O94986 1710 aa33.33■■■□□ 2.93
SYNE2-218ENST00000555241 DMRT2Q9Y5R5 561 aa33.32■■■□□ 2.92
SYNE2-218ENST00000555241 CAMSAP1Q5T5Y3 1602 aa33.31■■■□□ 2.92
SYNE2-218ENST00000555241 RRP7BPQ9NSQ0 103 aa33.31■■■□□ 2.92
SYNE2-218ENST00000555241 ANKRD30AQ9BXX3 1397 aa33.31■■■□□ 2.92
SYNE2-218ENST00000555241 NCOA1Q15788 1441 aa33.3■■■□□ 2.92
SYNE2-218ENST00000555241 PRDM15P57071 1507 aaPredicted RBP33.29■■■□□ 2.92
SYNE2-218ENST00000555241 DEPDC5O75140 1603 aa33.29■■■□□ 2.92
SYNE2-218ENST00000555241 FAM50AQ14320 339 aaKnown RBP33.29■■■□□ 2.92
SYNE2-218ENST00000555241 ADGRL2O95490 1459 aa33.28■■■□□ 2.92
SYNE2-218ENST00000555241 ILDR1Q86SU0 546 aaPredicted RBP33.27■■■□□ 2.92
SYNE2-218ENST00000555241 CHIC2Q9UKJ5 165 aa33.26■■■□□ 2.91
SYNE2-218ENST00000555241 A2ML1A8K2U0 1454 aa33.25■■■□□ 2.91
SYNE2-218ENST00000555241 TNRQ92752 1358 aa33.25■■■□□ 2.91
SYNE2-218ENST00000555241 FBXO31Q5XUX0 539 aaPredicted RBP33.25■■■□□ 2.91
SYNE2-218ENST00000555241 PTPRTO14522 1441 aa33.24■■■□□ 2.91
SYNE2-218ENST00000555241 PLA2R1Q13018 1463 aa33.24■■■□□ 2.91
SYNE2-218ENST00000555241 CFAP65Q6ZU64 1925 aaKnown RBP33.22■■■□□ 2.91
SYNE2-218ENST00000555241 SPATA31D1Q6ZQQ2 1576 aa33.19■■■□□ 2.9
SYNE2-218ENST00000555241 NLRP1Q9C000 1473 aa33.17■■■□□ 2.9
SYNE2-218ENST00000555241 ERVK-7P63135 1459 aa33.14■■■□□ 2.9
SYNE2-218ENST00000555241 KANK1Q14678 1352 aa33.12■■■□□ 2.89
SYNE2-218ENST00000555241 POLR1AO95602 1720 aaPredicted RBP33.12■■■□□ 2.89
SYNE2-218ENST00000555241 ARHGAP31Q2M1Z3 1444 aa33.11■■■□□ 2.89
SYNE2-218ENST00000555241 PKD2Q13563 968 aa33.11■■■□□ 2.89
SYNE2-218ENST00000555241 PPARGC1BQ86YN6 1023 aaKnown RBP33.11■■■□□ 2.89
SYNE2-218ENST00000555241 VWDEQ8N2E2 1590 aa33.11■■■□□ 2.89
SYNE2-218ENST00000555241 FBXO41Q8TF61 875 aa33.1■■■□□ 2.89
SYNE2-218ENST00000555241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.09■■■□□ 2.89
SYNE2-218ENST00000555241 LMTK2Q8IWU2 1503 aa33.08■■■□□ 2.89
SYNE2-218ENST00000555241 NCKAP5LQ9HCH0 1330 aa33.08■■■□□ 2.89
SYNE2-218ENST00000555241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.08■■■□□ 2.89
SYNE2-218ENST00000555241 ANKRD50Q9ULJ7 1429 aa33.08■■■□□ 2.89
SYNE2-218ENST00000555241 UGGT1Q9NYU2 1555 aa33.08■■■□□ 2.89
SYNE2-218ENST00000555241 CERKQ8TCT0 537 aa33.06■■■□□ 2.88
SYNE2-218ENST00000555241 ROCK1Q13464 1354 aa33.04■■■□□ 2.88
SYNE2-218ENST00000555241 THEMISQ8N1K5 641 aaPredicted RBP33■■■□□ 2.87
SYNE2-218ENST00000555241 NEURL4Q96JN8 1562 aa32.99■■■□□ 2.87
SYNE2-218ENST00000555241 UBR1Q8IWV7 1749 aa32.99■■■□□ 2.87
SYNE2-218ENST00000555241 LTBP4Q8N2S1 1624 aa32.99■■■□□ 2.87
SYNE2-218ENST00000555241 EFCAB6Q5THR3 1501 aa32.98■■■□□ 2.87
SYNE2-218ENST00000555241 UNC13BO14795 1591 aa32.97■■■□□ 2.87
SYNE2-218ENST00000555241 RRBP1Q9P2E9 1410 aaKnown RBP32.95■■■□□ 2.87
SYNE2-218ENST00000555241 TET3O43151 1660 aa32.92■■■□□ 2.86
SYNE2-218ENST00000555241 ANKLE2Q86XL3 938 aa32.91■■■□□ 2.86
SYNE2-218ENST00000555241 GCC2Q8IWJ2 1684 aa32.91■■■□□ 2.86
SYNE2-218ENST00000555241 ITGAEP38570 1179 aa32.9■■■□□ 2.86
SYNE2-218ENST00000555241 PIK3C2BO00750 1634 aa32.89■■■□□ 2.86
SYNE2-218ENST00000555241 KDM5AP29375 1690 aaKnown RBP32.88■■■□□ 2.85
SYNE2-218ENST00000555241 MED14O60244 1454 aa32.87■■■□□ 2.85
SYNE2-218ENST00000555241 RPRD2Q5VT52 1461 aaKnown RBP32.87■■■□□ 2.85
SYNE2-218ENST00000555241 SYNMO15061 1565 aa32.87■■■□□ 2.85
SYNE2-218ENST00000555241 IQSEC2Q5JU85 1478 aa32.86■■■□□ 2.85
SYNE2-218ENST00000555241 IQGAP1P46940 1657 aa32.85■■■□□ 2.85
SYNE2-218ENST00000555241 NOS1P29475 1434 aa32.85■■■□□ 2.85
SYNE2-218ENST00000555241 IQGAP3Q86VI3 1631 aa32.84■■■□□ 2.85
SYNE2-218ENST00000555241 ZNF335Q9H4Z2 1342 aaPredicted RBP32.84■■■□□ 2.85
SYNE2-218ENST00000555241 NPHP4O75161 1426 aaPredicted RBP32.82■■■□□ 2.84
SYNE2-218ENST00000555241 SLIT1O75093 1534 aa32.82■■■□□ 2.84
SYNE2-218ENST00000555241 ARHGAP23Q9P227 1491 aa32.8■■■□□ 2.84
SYNE2-218ENST00000555241 E9PCH4 1651 aa32.78■■■□□ 2.84
SYNE2-218ENST00000555241 SCAF11Q99590 1463 aaKnown RBP32.75■■■□□ 2.83
SYNE2-218ENST00000555241 IDI1Q13907 227 aa32.74■■■□□ 2.83
SYNE2-218ENST00000555241 ADGRB3O60242 1522 aa32.72■■■□□ 2.83
SYNE2-218ENST00000555241 SLC52A1Q9NWF4 448 aa32.72■■■□□ 2.83
SYNE2-218ENST00000555241 STAG3Q9UJ98 1225 aa32.72■■■□□ 2.83
SYNE2-218ENST00000555241 CPS1P31327 1500 aa32.71■■■□□ 2.83
SYNE2-218ENST00000555241 NUP155O75694 1391 aa32.7■■■□□ 2.83
SYNE2-218ENST00000555241 TMEM2Q9UHN6 1383 aa32.7■■■□□ 2.82
SYNE2-218ENST00000555241 MYO5BQ9ULV0 1848 aa32.69■■■□□ 2.82
SYNE2-218ENST00000555241 LTKP29376 864 aa32.66■■■□□ 2.82
SYNE2-218ENST00000555241 TXNDC2Q86VQ3 553 aa32.66■■■□□ 2.82
SYNE2-218ENST00000555241 EID1Q9Y6B2 187 aa32.66■■■□□ 2.82
SYNE2-218ENST00000555241 NAIPQ13075 1403 aa32.65■■■□□ 2.82
SYNE2-218ENST00000555241 STRCP1A6NGW2 1772 aa32.62■■■□□ 2.81
SYNE2-218ENST00000555241 TMEM131LA2VDJ0 1609 aa32.61■■■□□ 2.81
SYNE2-218ENST00000555241 HFM1A2PYH4 1435 aa32.59■■■□□ 2.81
SYNE2-218ENST00000555241 SPHKAPQ2M3C7 1700 aa32.58■■■□□ 2.81
SYNE2-218ENST00000555241 ZFYVE9O95405 1425 aa32.5■■■□□ 2.79
SYNE2-218ENST00000555241 UBAP1LF5GYI3 381 aa32.48■■■□□ 2.79
SYNE2-218ENST00000555241 LRRC7Q96NW7 1537 aa32.46■■■□□ 2.79
SYNE2-218ENST00000555241 RIMS2Q9UQ26 1411 aa32.45■■■□□ 2.79
SYNE2-218ENST00000555241 HDGFP51858 240 aaKnown RBP32.43■■■□□ 2.78
SYNE2-218ENST00000555241 CHGAP10645 457 aaKnown RBP32.42■■■□□ 2.78
SYNE2-218ENST00000555241 XIRP1Q702N8 1843 aaKnown RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms