RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
PRKCH-213ENST00000555185 NPHP4O75161 1426 aaPredicted RBP14.49□□□□□ -0.09
PRKCH-213ENST00000555185 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
PRKCH-213ENST00000555185 POTEAQ6S8J7 498 aa14.48□□□□□ -0.09
PRKCH-213ENST00000555185 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
PRKCH-213ENST00000555185 ADGBQ8N7X0 1667 aa14.48□□□□□ -0.09
PRKCH-213ENST00000555185 CCDC18Q5T9S5 1454 aa14.47□□□□□ -0.09
PRKCH-213ENST00000555185 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
PRKCH-213ENST00000555185 IQGAP1P46940 1657 aa14.46□□□□□ -0.09
PRKCH-213ENST00000555185 CASKIN1Q8WXD9 1431 aa14.45□□□□□ -0.1
PRKCH-213ENST00000555185 UGGT1Q9NYU2 1555 aa14.43□□□□□ -0.1
PRKCH-213ENST00000555185 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
PRKCH-213ENST00000555185 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
PRKCH-213ENST00000555185 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
PRKCH-213ENST00000555185 MED14O60244 1454 aa14.43□□□□□ -0.1
PRKCH-213ENST00000555185 PZPP20742 1482 aa14.43□□□□□ -0.1
PRKCH-213ENST00000555185 ZNF644Q9H582 1327 aaPredicted RBP14.42□□□□□ -0.1
PRKCH-213ENST00000555185 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
PRKCH-213ENST00000555185 SYNMO15061 1565 aa14.41□□□□□ -0.1
PRKCH-213ENST00000555185 XIRP1Q702N8 1843 aaKnown RBP14.41□□□□□ -0.1
PRKCH-213ENST00000555185 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
PRKCH-213ENST00000555185 PLEKHH2Q8IVE3 1493 aa14.4□□□□□ -0.1
PRKCH-213ENST00000555185 KIF3BO15066 747 aa14.4□□□□□ -0.1
PRKCH-213ENST00000555185 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
PRKCH-213ENST00000555185 MIA2Q96PC5 1412 aa14.39□□□□□ -0.11
PRKCH-213ENST00000555185 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
PRKCH-213ENST00000555185 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
PRKCH-213ENST00000555185 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
PRKCH-213ENST00000555185 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
PRKCH-213ENST00000555185 NLRP1Q9C000 1473 aa14.38□□□□□ -0.11
PRKCH-213ENST00000555185 DHX29Q7Z478 1369 aaKnown RBP14.37□□□□□ -0.11
PRKCH-213ENST00000555185 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
PRKCH-213ENST00000555185 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
PRKCH-213ENST00000555185 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
PRKCH-213ENST00000555185 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
PRKCH-213ENST00000555185 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
PRKCH-213ENST00000555185 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
PRKCH-213ENST00000555185 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
PRKCH-213ENST00000555185 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
PRKCH-213ENST00000555185 LTKP29376 864 aa14.29□□□□□ -0.12
PRKCH-213ENST00000555185 FAM135BQ49AJ0 1406 aa14.29□□□□□ -0.12
PRKCH-213ENST00000555185 MTUS2Q5JR59 1369 aa14.28□□□□□ -0.12
PRKCH-213ENST00000555185 SCAF11Q99590 1463 aaKnown RBP14.28□□□□□ -0.12
PRKCH-213ENST00000555185 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.13
PRKCH-213ENST00000555185 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
PRKCH-213ENST00000555185 ABCC3O15438 1527 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
PRKCH-213ENST00000555185 CEP152O94986 1710 aa14.24□□□□□ -0.13
PRKCH-213ENST00000555185 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
PRKCH-213ENST00000555185 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
PRKCH-213ENST00000555185 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
PRKCH-213ENST00000555185 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
PRKCH-213ENST00000555185 SLIT1O75093 1534 aa14.2□□□□□ -0.14
PRKCH-213ENST00000555185 LRP6O75581 1613 aa14.19□□□□□ -0.14
PRKCH-213ENST00000555185 MROH1Q8NDA8 1641 aa14.19□□□□□ -0.14
PRKCH-213ENST00000555185 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
PRKCH-213ENST00000555185 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
PRKCH-213ENST00000555185 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
PRKCH-213ENST00000555185 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
PRKCH-213ENST00000555185 JCADQ9P266 1359 aa14.17□□□□□ -0.14
PRKCH-213ENST00000555185 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
PRKCH-213ENST00000555185 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
PRKCH-213ENST00000555185 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
PRKCH-213ENST00000555185 MEX3CQ5U5Q3 659 aaKnown RBP14.15□□□□□ -0.14
PRKCH-213ENST00000555185 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
PRKCH-213ENST00000555185 KCNA6P17658 529 aa14.14□□□□□ -0.15
PRKCH-213ENST00000555185 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
PRKCH-213ENST00000555185 TMEM2Q9UHN6 1383 aa14.13□□□□□ -0.15
PRKCH-213ENST00000555185 TSPY4P0CV99 314 aa14.13□□□□□ -0.15
PRKCH-213ENST00000555185 TSPY10P0CW01 314 aa14.13□□□□□ -0.15
PRKCH-213ENST00000555185 PRDM15P57071 1507 aaPredicted RBP14.13□□□□□ -0.15
PRKCH-213ENST00000555185 SLAIN2Q9P270 581 aa14.12□□□□□ -0.15
PRKCH-213ENST00000555185 EIF2AK4Q9P2K8 1649 aaKnown RBP14.12□□□□□ -0.15
PRKCH-213ENST00000555185 MSH6P52701 1360 aa14.11□□□□□ -0.15
PRKCH-213ENST00000555185 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
PRKCH-213ENST00000555185 ZNF772Q68DY9 489 aaPredicted RBP14.11□□□□□ -0.15
PRKCH-213ENST00000555185 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
PRKCH-213ENST00000555185 TET3O43151 1660 aa14.1□□□□□ -0.15
PRKCH-213ENST00000555185 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
PRKCH-213ENST00000555185 RXRBP28702 533 aa14.09□□□□□ -0.15
PRKCH-213ENST00000555185 EFCAB6Q5THR3 1501 aa14.08□□□□□ -0.16
PRKCH-213ENST00000555185 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
PRKCH-213ENST00000555185 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
PRKCH-213ENST00000555185 NUTM2BA6NNL0 878 aaPredicted RBP14.07□□□□□ -0.16
PRKCH-213ENST00000555185 NUTM2EB1AL46 878 aaPredicted RBP14.07□□□□□ -0.16
PRKCH-213ENST00000555185 NUTM2AQ8IVF1 878 aaPredicted RBP14.07□□□□□ -0.16
PRKCH-213ENST00000555185 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
PRKCH-213ENST00000555185 KDM5AP29375 1690 aaKnown RBP14.07□□□□□ -0.16
PRKCH-213ENST00000555185 BCANQ96GW7 911 aa14.06□□□□□ -0.16
PRKCH-213ENST00000555185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRKCH-213ENST00000555185 SHPRHQ149N8 1683 aa14.06□□□□□ -0.16
PRKCH-213ENST00000555185 IDI1Q13907 227 aa14.05□□□□□ -0.16
PRKCH-213ENST00000555185 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
PRKCH-213ENST00000555185 FGD6Q6ZV73 1430 aa14.04□□□□□ -0.16
PRKCH-213ENST00000555185 RGS12O14924 1447 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms