RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
TRIM9-204ENST00000555170 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
TRIM9-204ENST00000555170 ADGBQ8N7X0 1667 aa13.17□□□□□ -0.3
TRIM9-204ENST00000555170 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
TRIM9-204ENST00000555170 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
TRIM9-204ENST00000555170 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
TRIM9-204ENST00000555170 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
TRIM9-204ENST00000555170 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
TRIM9-204ENST00000555170 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
TRIM9-204ENST00000555170 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
TRIM9-204ENST00000555170 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
TRIM9-204ENST00000555170 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
TRIM9-204ENST00000555170 DNMT1P26358 1616 aaKnown RBP13.11□□□□□ -0.31
TRIM9-204ENST00000555170 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
TRIM9-204ENST00000555170 PTPRKQ15262 1439 aa13.11□□□□□ -0.31
TRIM9-204ENST00000555170 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
TRIM9-204ENST00000555170 CPS1P31327 1500 aa13.1□□□□□ -0.31
TRIM9-204ENST00000555170 MROH2AA6NES4 1674 aa13.1□□□□□ -0.31
TRIM9-204ENST00000555170 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
TRIM9-204ENST00000555170 ZNF142P52746 1687 aaPredicted RBP13.08□□□□□ -0.31
TRIM9-204ENST00000555170 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
TRIM9-204ENST00000555170 POTEAQ6S8J7 498 aa13.08□□□□□ -0.32
TRIM9-204ENST00000555170 A2MP01023 1474 aa13.08□□□□□ -0.32
TRIM9-204ENST00000555170 GGT6Q6P531 493 aa13.07□□□□□ -0.32
TRIM9-204ENST00000555170 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
TRIM9-204ENST00000555170 CLTCQ00610 1675 aaKnown RBP13.06□□□□□ -0.32
TRIM9-204ENST00000555170 ABCC5O15440 1437 aa13.05□□□□□ -0.32
TRIM9-204ENST00000555170 DAPK1P53355 1430 aa13.05□□□□□ -0.32
TRIM9-204ENST00000555170 A2ML1A8K2U0 1454 aa13.04□□□□□ -0.32
TRIM9-204ENST00000555170 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
TRIM9-204ENST00000555170 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
TRIM9-204ENST00000555170 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
TRIM9-204ENST00000555170 VWDEQ8N2E2 1590 aa13.02□□□□□ -0.33
TRIM9-204ENST00000555170 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
TRIM9-204ENST00000555170 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
TRIM9-204ENST00000555170 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
TRIM9-204ENST00000555170 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
TRIM9-204ENST00000555170 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
TRIM9-204ENST00000555170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIM9-204ENST00000555170 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
TRIM9-204ENST00000555170 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
TRIM9-204ENST00000555170 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
TRIM9-204ENST00000555170 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
TRIM9-204ENST00000555170 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
TRIM9-204ENST00000555170 POLR1AO95602 1720 aaPredicted RBP12.97□□□□□ -0.33
TRIM9-204ENST00000555170 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
TRIM9-204ENST00000555170 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
TRIM9-204ENST00000555170 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.34
TRIM9-204ENST00000555170 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
TRIM9-204ENST00000555170 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
TRIM9-204ENST00000555170 TNRQ92752 1358 aa12.95□□□□□ -0.34
TRIM9-204ENST00000555170 KIF15Q9NS87 1388 aa12.95□□□□□ -0.34
TRIM9-204ENST00000555170 CEP152O94986 1710 aa12.95□□□□□ -0.34
TRIM9-204ENST00000555170 KDM5DQ9BY66 1539 aa12.94□□□□□ -0.34
TRIM9-204ENST00000555170 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
TRIM9-204ENST00000555170 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
TRIM9-204ENST00000555170 PRDM15P57071 1507 aaPredicted RBP12.93□□□□□ -0.34
TRIM9-204ENST00000555170 MED14O60244 1454 aa12.93□□□□□ -0.34
TRIM9-204ENST00000555170 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
TRIM9-204ENST00000555170 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
TRIM9-204ENST00000555170 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
TRIM9-204ENST00000555170 SETD1AO15047 1707 aaKnown RBP12.92□□□□□ -0.34
TRIM9-204ENST00000555170 KIF3BO15066 747 aa12.92□□□□□ -0.34
TRIM9-204ENST00000555170 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM9-204ENST00000555170 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
TRIM9-204ENST00000555170 RRP7BPQ9NSQ0 103 aa12.91□□□□□ -0.34
TRIM9-204ENST00000555170 ABCC3O15438 1527 aa12.91□□□□□ -0.34
TRIM9-204ENST00000555170 GCC2Q8IWJ2 1684 aa12.88□□□□□ -0.35
TRIM9-204ENST00000555170 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
TRIM9-204ENST00000555170 UNC13BO14795 1591 aa12.87□□□□□ -0.35
TRIM9-204ENST00000555170 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
TRIM9-204ENST00000555170 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
TRIM9-204ENST00000555170 FAM135BQ49AJ0 1406 aa12.87□□□□□ -0.35
TRIM9-204ENST00000555170 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
TRIM9-204ENST00000555170 PZPP20742 1482 aa12.86□□□□□ -0.35
TRIM9-204ENST00000555170 ITGAEP38570 1179 aa12.86□□□□□ -0.35
TRIM9-204ENST00000555170 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
TRIM9-204ENST00000555170 ANKRD50Q9ULJ7 1429 aa12.85□□□□□ -0.35
TRIM9-204ENST00000555170 SYNMO15061 1565 aa12.84□□□□□ -0.35
TRIM9-204ENST00000555170 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
TRIM9-204ENST00000555170 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
TRIM9-204ENST00000555170 LMTK2Q8IWU2 1503 aa12.83□□□□□ -0.36
TRIM9-204ENST00000555170 EFCAB6Q5THR3 1501 aa12.82□□□□□ -0.36
TRIM9-204ENST00000555170 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
TRIM9-204ENST00000555170 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
TRIM9-204ENST00000555170 TET3O43151 1660 aa12.8□□□□□ -0.36
TRIM9-204ENST00000555170 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
TRIM9-204ENST00000555170 LTKP29376 864 aa12.8□□□□□ -0.36
TRIM9-204ENST00000555170 XIRP1Q702N8 1843 aaKnown RBP12.8□□□□□ -0.36
TRIM9-204ENST00000555170 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
TRIM9-204ENST00000555170 NAIPQ13075 1403 aa12.79□□□□□ -0.36
TRIM9-204ENST00000555170 E9PCH4 1651 aa12.78□□□□□ -0.36
TRIM9-204ENST00000555170 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
TRIM9-204ENST00000555170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM9-204ENST00000555170 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
TRIM9-204ENST00000555170 TMEM94Q12767 1356 aa12.77□□□□□ -0.37
TRIM9-204ENST00000555170 KANK1Q14678 1352 aa12.77□□□□□ -0.37
TRIM9-204ENST00000555170 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
TRIM9-204ENST00000555170 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
TRIM9-204ENST00000555170 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms