RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 KDM5CP41229 1560 aa16.14■□□□□ 0.17
TMEM260-206ENST00000555046 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
TMEM260-206ENST00000555046 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
TMEM260-206ENST00000555046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM260-206ENST00000555046 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
TMEM260-206ENST00000555046 DHX29Q7Z478 1369 aaKnown RBP16.1■□□□□ 0.17
TMEM260-206ENST00000555046 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
TMEM260-206ENST00000555046 ZNF142P52746 1687 aaPredicted RBP16.08■□□□□ 0.16
TMEM260-206ENST00000555046 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
TMEM260-206ENST00000555046 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
TMEM260-206ENST00000555046 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
TMEM260-206ENST00000555046 ABCC5O15440 1437 aa16.07■□□□□ 0.16
TMEM260-206ENST00000555046 PTPN23Q9H3S7 1636 aa16.06■□□□□ 0.16
TMEM260-206ENST00000555046 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
TMEM260-206ENST00000555046 A2MP01023 1474 aa16.06■□□□□ 0.16
TMEM260-206ENST00000555046 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
TMEM260-206ENST00000555046 KIF3BO15066 747 aa16.05■□□□□ 0.16
TMEM260-206ENST00000555046 GGT6Q6P531 493 aa16.05■□□□□ 0.16
TMEM260-206ENST00000555046 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
TMEM260-206ENST00000555046 DAPK1P53355 1430 aa16.04■□□□□ 0.16
TMEM260-206ENST00000555046 TOM1O60784 492 aa16.04■□□□□ 0.16
TMEM260-206ENST00000555046 AGLP35573 1532 aa16.04■□□□□ 0.16
TMEM260-206ENST00000555046 CPS1P31327 1500 aa16.03■□□□□ 0.16
TMEM260-206ENST00000555046 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
TMEM260-206ENST00000555046 REREQ9P2R6 1566 aa16.02■□□□□ 0.16
TMEM260-206ENST00000555046 ITGAEP38570 1179 aa16.02■□□□□ 0.16
TMEM260-206ENST00000555046 SHANK2Q9UPX8 1470 aa16.02■□□□□ 0.15
TMEM260-206ENST00000555046 RRBP1Q9P2E9 1410 aaKnown RBP16.01■□□□□ 0.15
TMEM260-206ENST00000555046 KIF15Q9NS87 1388 aa16■□□□□ 0.15
TMEM260-206ENST00000555046 DIP2CQ9Y2E4 1556 aa16■□□□□ 0.15
TMEM260-206ENST00000555046 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
TMEM260-206ENST00000555046 POTEAQ6S8J7 498 aa15.99■□□□□ 0.15
TMEM260-206ENST00000555046 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
TMEM260-206ENST00000555046 ROCK1Q13464 1354 aa15.98■□□□□ 0.15
TMEM260-206ENST00000555046 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
TMEM260-206ENST00000555046 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
TMEM260-206ENST00000555046 CNTLNQ9NXG0 1405 aa15.97■□□□□ 0.15
TMEM260-206ENST00000555046 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
TMEM260-206ENST00000555046 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.15
TMEM260-206ENST00000555046 NPATQ14207 1427 aa15.96■□□□□ 0.15
TMEM260-206ENST00000555046 PTPRKQ15262 1439 aa15.96■□□□□ 0.15
TMEM260-206ENST00000555046 ABCA6Q8N139 1617 aa15.96■□□□□ 0.15
TMEM260-206ENST00000555046 POLR1AO95602 1720 aaPredicted RBP15.95■□□□□ 0.14
TMEM260-206ENST00000555046 PKD2Q13563 968 aa15.95■□□□□ 0.14
TMEM260-206ENST00000555046 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
TMEM260-206ENST00000555046 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
TMEM260-206ENST00000555046 ERBINQ96RT1 1412 aa15.93■□□□□ 0.14
TMEM260-206ENST00000555046 ADGRL2O95490 1459 aa15.92■□□□□ 0.14
TMEM260-206ENST00000555046 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
TMEM260-206ENST00000555046 KANK1Q14678 1352 aa15.92■□□□□ 0.14
TMEM260-206ENST00000555046 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
TMEM260-206ENST00000555046 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
TMEM260-206ENST00000555046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
TMEM260-206ENST00000555046 ANKRD50Q9ULJ7 1429 aa15.91■□□□□ 0.14
TMEM260-206ENST00000555046 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
TMEM260-206ENST00000555046 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
TMEM260-206ENST00000555046 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
TMEM260-206ENST00000555046 VWDEQ8N2E2 1590 aa15.9■□□□□ 0.14
TMEM260-206ENST00000555046 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
TMEM260-206ENST00000555046 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
TMEM260-206ENST00000555046 STRCP1A6NGW2 1772 aa15.84■□□□□ 0.13
TMEM260-206ENST00000555046 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
TMEM260-206ENST00000555046 ADRA2BP18089 450 aa15.81■□□□□ 0.12
TMEM260-206ENST00000555046 CLTCQ00610 1675 aaKnown RBP15.81■□□□□ 0.12
TMEM260-206ENST00000555046 EIF2AK4Q9P2K8 1649 aaKnown RBP15.8■□□□□ 0.12
TMEM260-206ENST00000555046 SYNMO15061 1565 aa15.8■□□□□ 0.12
TMEM260-206ENST00000555046 NUP155O75694 1391 aa15.79■□□□□ 0.12
TMEM260-206ENST00000555046 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
TMEM260-206ENST00000555046 HFM1A2PYH4 1435 aa15.78■□□□□ 0.12
TMEM260-206ENST00000555046 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
TMEM260-206ENST00000555046 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
TMEM260-206ENST00000555046 NAIPQ13075 1403 aa15.77■□□□□ 0.11
TMEM260-206ENST00000555046 HRCP23327 699 aa15.76■□□□□ 0.11
TMEM260-206ENST00000555046 LRRC7Q96NW7 1537 aa15.76■□□□□ 0.11
TMEM260-206ENST00000555046 ARHGAP31Q2M1Z3 1444 aa15.76■□□□□ 0.11
TMEM260-206ENST00000555046 A2ML1A8K2U0 1454 aa15.75■□□□□ 0.11
TMEM260-206ENST00000555046 PZPP20742 1482 aa15.74■□□□□ 0.11
TMEM260-206ENST00000555046 TNRQ92752 1358 aa15.74■□□□□ 0.11
TMEM260-206ENST00000555046 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-206ENST00000555046 SLC52A1Q9NWF4 448 aa15.73■□□□□ 0.11
TMEM260-206ENST00000555046 ABCC3O15438 1527 aa15.73■□□□□ 0.11
TMEM260-206ENST00000555046 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.11
TMEM260-206ENST00000555046 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.11
TMEM260-206ENST00000555046 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
TMEM260-206ENST00000555046 PRDM15P57071 1507 aaPredicted RBP15.71■□□□□ 0.11
TMEM260-206ENST00000555046 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.11
TMEM260-206ENST00000555046 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
TMEM260-206ENST00000555046 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
TMEM260-206ENST00000555046 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
TMEM260-206ENST00000555046 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
TMEM260-206ENST00000555046 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
TMEM260-206ENST00000555046 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
TMEM260-206ENST00000555046 NLRP1Q9C000 1473 aa15.66■□□□□ 0.1
TMEM260-206ENST00000555046 MROH1Q8NDA8 1641 aa15.66■□□□□ 0.1
TMEM260-206ENST00000555046 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
TMEM260-206ENST00000555046 IDI1Q13907 227 aa15.65■□□□□ 0.1
TMEM260-206ENST00000555046 ANKLE2Q86XL3 938 aa15.65■□□□□ 0.1
TMEM260-206ENST00000555046 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
TMEM260-206ENST00000555046 MED14O60244 1454 aa15.65■□□□□ 0.1
TMEM260-206ENST00000555046 ERVK-7P63135 1459 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms