RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 MTMR7Q9Y216 660 aa10.23□□□□□ -0.77
TGFB3-202ENST00000554980 KIF14Q15058 1648 aa10.23□□□□□ -0.77
TGFB3-202ENST00000554980 ARAP3Q8WWN8 1544 aa10.22□□□□□ -0.77
TGFB3-202ENST00000554980 RBM25P49756 843 aaKnown RBP10.21□□□□□ -0.77
TGFB3-202ENST00000554980 SECISBP2LQ93073 1101 aaKnown RBP10.21□□□□□ -0.77
TGFB3-202ENST00000554980 PLCD4Q9BRC7 762 aa10.21□□□□□ -0.78
TGFB3-202ENST00000554980 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.78
TGFB3-202ENST00000554980 FRMPD1Q5SYB0 1578 aa10.21□□□□□ -0.78
TGFB3-202ENST00000554980 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
TGFB3-202ENST00000554980 FANCAO15360 1455 aa10.2□□□□□ -0.78
TGFB3-202ENST00000554980 ADGRL1O94910 1474 aa10.2□□□□□ -0.78
TGFB3-202ENST00000554980 IPO4Q8TEX9 1081 aaKnown RBP10.2□□□□□ -0.78
TGFB3-202ENST00000554980 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
TGFB3-202ENST00000554980 AKNAQ7Z591 1439 aa10.19□□□□□ -0.78
TGFB3-202ENST00000554980 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
TGFB3-202ENST00000554980 NEO1Q92859 1461 aa10.19□□□□□ -0.78
TGFB3-202ENST00000554980 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
TGFB3-202ENST00000554980 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
TGFB3-202ENST00000554980 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
TGFB3-202ENST00000554980 FOXD4L4Q8WXT5 416 aaPredicted RBP10.18□□□□□ -0.78
TGFB3-202ENST00000554980 RNF216Q9NWF9 866 aaPredicted RBP10.18□□□□□ -0.78
TGFB3-202ENST00000554980 PLCH2O75038 1416 aa10.17□□□□□ -0.78
TGFB3-202ENST00000554980 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
TGFB3-202ENST00000554980 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
TGFB3-202ENST00000554980 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
TGFB3-202ENST00000554980 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
TGFB3-202ENST00000554980 RICTORQ6R327 1708 aa10.15□□□□□ -0.78
TGFB3-202ENST00000554980 DENND4BO75064 1496 aaPredicted RBP10.15□□□□□ -0.78
TGFB3-202ENST00000554980 PPM1GO15355 546 aaPredicted RBP10.14□□□□□ -0.79
TGFB3-202ENST00000554980 SETQ01105 290 aaPredicted RBP10.14□□□□□ -0.79
TGFB3-202ENST00000554980 KCNG1Q9UIX4 513 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 SCAPERQ9BY12 1400 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 YEATS2Q9ULM3 1422 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 SIGLEC1Q9BZZ2 1709 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 CCDC27Q2M243 656 aa10.14□□□□□ -0.79
TGFB3-202ENST00000554980 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 FAM43BQ6ZT52 329 aaPredicted RBP10.13□□□□□ -0.79
TGFB3-202ENST00000554980 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 PTMSP20962 102 aa10.13□□□□□ -0.79
TGFB3-202ENST00000554980 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
TGFB3-202ENST00000554980 WWC1Q8IX03 1113 aa10.12□□□□□ -0.79
TGFB3-202ENST00000554980 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
TGFB3-202ENST00000554980 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
TGFB3-202ENST00000554980 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
TGFB3-202ENST00000554980 FTSJ3Q8IY81 847 aaKnown RBP10.1□□□□□ -0.79
TGFB3-202ENST00000554980 CHMP4BQ9H444 224 aaKnown RBP10.1□□□□□ -0.79
TGFB3-202ENST00000554980 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
TGFB3-202ENST00000554980 CDC42BPAQ5VT25 1732 aa10.09□□□□□ -0.79
TGFB3-202ENST00000554980 CFAP74Q9C0B2 1584 aa10.09□□□□□ -0.79
TGFB3-202ENST00000554980 MCCP23508 829 aa10.09□□□□□ -0.79
TGFB3-202ENST00000554980 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
TGFB3-202ENST00000554980 GPATCH8Q9UKJ3 1502 aaKnown RBP10.08□□□□□ -0.8
TGFB3-202ENST00000554980 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
TGFB3-202ENST00000554980 ARHGEF40Q8TER5 1519 aa10.08□□□□□ -0.8
TGFB3-202ENST00000554980 ZNF644Q9H582 1327 aaPredicted RBP10.08□□□□□ -0.8
TGFB3-202ENST00000554980 ANAPC15P60006 121 aa10.08□□□□□ -0.8
TGFB3-202ENST00000554980 MLECQ14165 292 aa10.08□□□□□ -0.8
TGFB3-202ENST00000554980 PKD2Q13563 968 aa10.07□□□□□ -0.8
TGFB3-202ENST00000554980 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
TGFB3-202ENST00000554980 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
TGFB3-202ENST00000554980 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.8
TGFB3-202ENST00000554980 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
TGFB3-202ENST00000554980 MAFGO15525 162 aa10.06□□□□□ -0.8
TGFB3-202ENST00000554980 ADAMTSL3P82987 1691 aa10.06□□□□□ -0.8
TGFB3-202ENST00000554980 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
TGFB3-202ENST00000554980 BCORL1Q5H9F3 1711 aa10.05□□□□□ -0.8
TGFB3-202ENST00000554980 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
TGFB3-202ENST00000554980 ABCC1P33527 1531 aa10.05□□□□□ -0.8
TGFB3-202ENST00000554980 MADDQ8WXG6 1647 aa10.05□□□□□ -0.8
TGFB3-202ENST00000554980 KDM4AO75164 1064 aa10.05□□□□□ -0.8
TGFB3-202ENST00000554980 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
TGFB3-202ENST00000554980 KDM5CP41229 1560 aa10.04□□□□□ -0.8
TGFB3-202ENST00000554980 DNAJC2Q99543 621 aaKnown RBP10.04□□□□□ -0.8
TGFB3-202ENST00000554980 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
TGFB3-202ENST00000554980 PTPRMP28827 1452 aa10.04□□□□□ -0.8
TGFB3-202ENST00000554980 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
TGFB3-202ENST00000554980 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
TGFB3-202ENST00000554980 SYCP2Q9BX26 1530 aa10.03□□□□□ -0.8
TGFB3-202ENST00000554980 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
TGFB3-202ENST00000554980 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
TGFB3-202ENST00000554980 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
TGFB3-202ENST00000554980 ATP10AO60312 1499 aa10.02□□□□□ -0.81
TGFB3-202ENST00000554980 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
TGFB3-202ENST00000554980 ABCA6Q8N139 1617 aa10.01□□□□□ -0.81
TGFB3-202ENST00000554980 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
TGFB3-202ENST00000554980 DIP2CQ9Y2E4 1556 aa10.01□□□□□ -0.81
TGFB3-202ENST00000554980 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
TGFB3-202ENST00000554980 PTMAP06454 111 aaKnown RBP10.01□□□□□ -0.81
TGFB3-202ENST00000554980 EHBP1L1Q8N3D4 1523 aa10.01□□□□□ -0.81
TGFB3-202ENST00000554980 RIMS1Q86UR5 1692 aaKnown RBP10□□□□□ -0.81
TGFB3-202ENST00000554980 CEBPAP49715 358 aaPredicted RBP10□□□□□ -0.81
TGFB3-202ENST00000554980 GPATCH11Q8N954 259 aa10□□□□□ -0.81
TGFB3-202ENST00000554980 NCOA2Q15596 1464 aa10□□□□□ -0.81
TGFB3-202ENST00000554980 PIAS4Q8N2W9 510 aaPredicted RBP10□□□□□ -0.81
TGFB3-202ENST00000554980 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
TGFB3-202ENST00000554980 C9orf84Q5VXU9 1444 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms