RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
LINC01397-201ENST00000554808 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
LINC01397-201ENST00000554808 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
LINC01397-201ENST00000554808 PRDM15P57071 1507 aaPredicted RBP12.15□□□□□ -0.46
LINC01397-201ENST00000554808 CEP152O94986 1710 aa12.14□□□□□ -0.47
LINC01397-201ENST00000554808 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
LINC01397-201ENST00000554808 TRIM26Q12899 539 aaPredicted RBP12.13□□□□□ -0.47
LINC01397-201ENST00000554808 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
LINC01397-201ENST00000554808 ITGAEP38570 1179 aa12.12□□□□□ -0.47
LINC01397-201ENST00000554808 CHIC2Q9UKJ5 165 aa12.12□□□□□ -0.47
LINC01397-201ENST00000554808 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
LINC01397-201ENST00000554808 NAIPQ13075 1403 aa12.11□□□□□ -0.47
LINC01397-201ENST00000554808 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
LINC01397-201ENST00000554808 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
LINC01397-201ENST00000554808 SETD1BQ9UPS6 1966 aaKnown RBP12.11□□□□□ -0.47
LINC01397-201ENST00000554808 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
LINC01397-201ENST00000554808 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
LINC01397-201ENST00000554808 TET3O43151 1660 aa12.1□□□□□ -0.47
LINC01397-201ENST00000554808 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
LINC01397-201ENST00000554808 CAMSAP1Q5T5Y3 1602 aa12.1□□□□□ -0.47
LINC01397-201ENST00000554808 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
LINC01397-201ENST00000554808 CNTLNQ9NXG0 1405 aa12.09□□□□□ -0.47
LINC01397-201ENST00000554808 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
LINC01397-201ENST00000554808 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
LINC01397-201ENST00000554808 C3P01024 1663 aa12.08□□□□□ -0.48
LINC01397-201ENST00000554808 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
LINC01397-201ENST00000554808 KANK1Q14678 1352 aa12.07□□□□□ -0.48
LINC01397-201ENST00000554808 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
LINC01397-201ENST00000554808 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
LINC01397-201ENST00000554808 KIF3BO15066 747 aa12.06□□□□□ -0.48
LINC01397-201ENST00000554808 SPHKAPQ2M3C7 1700 aa12.04□□□□□ -0.48
LINC01397-201ENST00000554808 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
LINC01397-201ENST00000554808 ABCC3O15438 1527 aa12.04□□□□□ -0.48
LINC01397-201ENST00000554808 E9PCH4 1651 aa12.03□□□□□ -0.48
LINC01397-201ENST00000554808 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
LINC01397-201ENST00000554808 HRCP23327 699 aa12.03□□□□□ -0.48
LINC01397-201ENST00000554808 STRCQ7RTU9 1775 aa12.02□□□□□ -0.48
LINC01397-201ENST00000554808 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.48
LINC01397-201ENST00000554808 GGT6Q6P531 493 aa12.01□□□□□ -0.49
LINC01397-201ENST00000554808 HSPA2P54652 639 aa12□□□□□ -0.49
LINC01397-201ENST00000554808 RAB3GAP2Q9H2M9 1393 aa12□□□□□ -0.49
LINC01397-201ENST00000554808 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
LINC01397-201ENST00000554808 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
LINC01397-201ENST00000554808 PZPP20742 1482 aa11.99□□□□□ -0.49
LINC01397-201ENST00000554808 KDM5AP29375 1690 aaKnown RBP11.99□□□□□ -0.49
LINC01397-201ENST00000554808 KIF1BO60333 1816 aa11.99□□□□□ -0.49
LINC01397-201ENST00000554808 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
LINC01397-201ENST00000554808 MLECQ14165 292 aa11.98□□□□□ -0.49
LINC01397-201ENST00000554808 SPATA31D1Q6ZQQ2 1576 aa11.97□□□□□ -0.49
LINC01397-201ENST00000554808 NUP155O75694 1391 aa11.97□□□□□ -0.49
LINC01397-201ENST00000554808 NPATQ14207 1427 aa11.96□□□□□ -0.49
LINC01397-201ENST00000554808 MYO3AQ8NEV4 1616 aa11.96□□□□□ -0.5
LINC01397-201ENST00000554808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01397-201ENST00000554808 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
LINC01397-201ENST00000554808 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
LINC01397-201ENST00000554808 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
LINC01397-201ENST00000554808 PIK3C2BO00750 1634 aa11.93□□□□□ -0.5
LINC01397-201ENST00000554808 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
LINC01397-201ENST00000554808 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
LINC01397-201ENST00000554808 TRPM2O94759 1503 aa11.91□□□□□ -0.5
LINC01397-201ENST00000554808 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
LINC01397-201ENST00000554808 SYNMO15061 1565 aa11.91□□□□□ -0.5
LINC01397-201ENST00000554808 NLRP1Q9C000 1473 aa11.9□□□□□ -0.5
LINC01397-201ENST00000554808 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.5
LINC01397-201ENST00000554808 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
LINC01397-201ENST00000554808 NOS1P29475 1434 aa11.89□□□□□ -0.51
LINC01397-201ENST00000554808 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
LINC01397-201ENST00000554808 POLR1AO95602 1720 aaPredicted RBP11.89□□□□□ -0.51
LINC01397-201ENST00000554808 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
LINC01397-201ENST00000554808 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
LINC01397-201ENST00000554808 PTPRTO14522 1441 aa11.87□□□□□ -0.51
LINC01397-201ENST00000554808 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
LINC01397-201ENST00000554808 CLTCL1P53675 1640 aa11.87□□□□□ -0.51
LINC01397-201ENST00000554808 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
LINC01397-201ENST00000554808 TNRQ92752 1358 aa11.87□□□□□ -0.51
LINC01397-201ENST00000554808 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
LINC01397-201ENST00000554808 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
LINC01397-201ENST00000554808 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
LINC01397-201ENST00000554808 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
LINC01397-201ENST00000554808 PKD2Q13563 968 aa11.85□□□□□ -0.51
LINC01397-201ENST00000554808 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
LINC01397-201ENST00000554808 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
LINC01397-201ENST00000554808 IFT172Q9UG01 1749 aa11.84□□□□□ -0.51
LINC01397-201ENST00000554808 SLC52A1Q9NWF4 448 aa11.84□□□□□ -0.51
LINC01397-201ENST00000554808 PPLO60437 1756 aa11.84□□□□□ -0.51
LINC01397-201ENST00000554808 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
LINC01397-201ENST00000554808 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
LINC01397-201ENST00000554808 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
LINC01397-201ENST00000554808 PLA2R1Q13018 1463 aa11.79□□□□□ -0.52
LINC01397-201ENST00000554808 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
LINC01397-201ENST00000554808 SLIT1O75093 1534 aa11.79□□□□□ -0.52
LINC01397-201ENST00000554808 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
LINC01397-201ENST00000554808 IQSEC2Q5JU85 1478 aa11.78□□□□□ -0.52
LINC01397-201ENST00000554808 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
LINC01397-201ENST00000554808 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
LINC01397-201ENST00000554808 IDI1Q13907 227 aa11.75□□□□□ -0.53
LINC01397-201ENST00000554808 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
LINC01397-201ENST00000554808 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
LINC01397-201ENST00000554808 ARHGAP23Q9P227 1491 aa11.75□□□□□ -0.53
LINC01397-201ENST00000554808 LAMC1P11047 1609 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms