RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
XRCC3-207ENST00000554774 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
XRCC3-207ENST00000554774 LRRC9Q6ZRR7 1453 aa22.25■■□□□ 1.15
XRCC3-207ENST00000554774 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
XRCC3-207ENST00000554774 KDM5DQ9BY66 1539 aa22.24■■□□□ 1.15
XRCC3-207ENST00000554774 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
XRCC3-207ENST00000554774 DNMT1P26358 1616 aaKnown RBP22.24■■□□□ 1.15
XRCC3-207ENST00000554774 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
XRCC3-207ENST00000554774 TNRQ92752 1358 aa22.22■■□□□ 1.15
XRCC3-207ENST00000554774 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
XRCC3-207ENST00000554774 PZPP20742 1482 aa22.21■■□□□ 1.15
XRCC3-207ENST00000554774 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
XRCC3-207ENST00000554774 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
XRCC3-207ENST00000554774 POLR1AO95602 1720 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-207ENST00000554774 UBAP1LF5GYI3 381 aa22.15■■□□□ 1.14
XRCC3-207ENST00000554774 MAST1Q9Y2H9 1570 aa22.15■■□□□ 1.14
XRCC3-207ENST00000554774 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
XRCC3-207ENST00000554774 MIA2Q96PC5 1412 aa22.13■■□□□ 1.13
XRCC3-207ENST00000554774 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
XRCC3-207ENST00000554774 MYOM3Q5VTT5 1437 aa22.12■■□□□ 1.13
XRCC3-207ENST00000554774 NEURL4Q96JN8 1562 aa22.11■■□□□ 1.13
XRCC3-207ENST00000554774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
XRCC3-207ENST00000554774 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
XRCC3-207ENST00000554774 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-207ENST00000554774 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
XRCC3-207ENST00000554774 ANKLE2Q86XL3 938 aa22.09■■□□□ 1.13
XRCC3-207ENST00000554774 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.13
XRCC3-207ENST00000554774 ZC3H13Q5T200 1668 aaKnown RBP22.08■■□□□ 1.13
XRCC3-207ENST00000554774 ABCC3O15438 1527 aa22.08■■□□□ 1.13
XRCC3-207ENST00000554774 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
XRCC3-207ENST00000554774 EIF2AK4Q9P2K8 1649 aaKnown RBP22.08■■□□□ 1.13
XRCC3-207ENST00000554774 APLP2Q06481 763 aa22.04■■□□□ 1.12
XRCC3-207ENST00000554774 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
XRCC3-207ENST00000554774 CEP152O94986 1710 aa22.03■■□□□ 1.12
XRCC3-207ENST00000554774 CPS1P31327 1500 aa22.03■■□□□ 1.12
XRCC3-207ENST00000554774 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
XRCC3-207ENST00000554774 MROH1Q8NDA8 1641 aa22.02■■□□□ 1.12
XRCC3-207ENST00000554774 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.12
XRCC3-207ENST00000554774 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
XRCC3-207ENST00000554774 NPHP4O75161 1426 aaPredicted RBP22.01■■□□□ 1.11
XRCC3-207ENST00000554774 DEPDC5O75140 1603 aa22.01■■□□□ 1.11
XRCC3-207ENST00000554774 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
XRCC3-207ENST00000554774 PTPN23Q9H3S7 1636 aa21.99■■□□□ 1.11
XRCC3-207ENST00000554774 MED14O60244 1454 aa21.99■■□□□ 1.11
XRCC3-207ENST00000554774 VWDEQ8N2E2 1590 aa21.99■■□□□ 1.11
XRCC3-207ENST00000554774 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
XRCC3-207ENST00000554774 CROCC2H7BZ55 1655 aa21.98■■□□□ 1.11
XRCC3-207ENST00000554774 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
XRCC3-207ENST00000554774 IQGAP1P46940 1657 aa21.98■■□□□ 1.11
XRCC3-207ENST00000554774 ABCC5O15440 1437 aa21.97■■□□□ 1.11
XRCC3-207ENST00000554774 PIP4K2BP78356 416 aa21.97■■□□□ 1.11
XRCC3-207ENST00000554774 TOM1O60784 492 aa21.96■■□□□ 1.11
XRCC3-207ENST00000554774 SOCS7O14512 581 aa21.94■■□□□ 1.1
XRCC3-207ENST00000554774 ERBINQ96RT1 1412 aa21.94■■□□□ 1.1
XRCC3-207ENST00000554774 DAPK1P53355 1430 aa21.93■■□□□ 1.1
XRCC3-207ENST00000554774 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
XRCC3-207ENST00000554774 UBR1Q8IWV7 1749 aa21.93■■□□□ 1.1
XRCC3-207ENST00000554774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.1
XRCC3-207ENST00000554774 FGD6Q6ZV73 1430 aa21.91■■□□□ 1.1
XRCC3-207ENST00000554774 HSPA1LP34931 641 aa21.9■■□□□ 1.1
XRCC3-207ENST00000554774 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.1
XRCC3-207ENST00000554774 CHIC2Q9UKJ5 165 aa21.89■■□□□ 1.09
XRCC3-207ENST00000554774 STRCP1A6NGW2 1772 aa21.88■■□□□ 1.09
XRCC3-207ENST00000554774 KANK1Q14678 1352 aa21.87■■□□□ 1.09
XRCC3-207ENST00000554774 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
XRCC3-207ENST00000554774 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
XRCC3-207ENST00000554774 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
XRCC3-207ENST00000554774 LTKP29376 864 aa21.84■■□□□ 1.09
XRCC3-207ENST00000554774 LRRC7Q96NW7 1537 aa21.84■■□□□ 1.09
XRCC3-207ENST00000554774 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.09
XRCC3-207ENST00000554774 SLIT1O75093 1534 aa21.83■■□□□ 1.09
XRCC3-207ENST00000554774 PIK3C2BO00750 1634 aa21.83■■□□□ 1.08
XRCC3-207ENST00000554774 SYNMO15061 1565 aa21.82■■□□□ 1.08
XRCC3-207ENST00000554774 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
XRCC3-207ENST00000554774 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
XRCC3-207ENST00000554774 ALKQ9UM73 1620 aa21.81■■□□□ 1.08
XRCC3-207ENST00000554774 LMTK2Q8IWU2 1503 aa21.79■■□□□ 1.08
XRCC3-207ENST00000554774 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
XRCC3-207ENST00000554774 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.08
XRCC3-207ENST00000554774 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
XRCC3-207ENST00000554774 TMEM2Q9UHN6 1383 aa21.76■■□□□ 1.07
XRCC3-207ENST00000554774 IDI1Q13907 227 aa21.75■■□□□ 1.07
XRCC3-207ENST00000554774 ADGRL2O95490 1459 aa21.75■■□□□ 1.07
XRCC3-207ENST00000554774 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
XRCC3-207ENST00000554774 KDM5AP29375 1690 aaKnown RBP21.73■■□□□ 1.07
XRCC3-207ENST00000554774 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
XRCC3-207ENST00000554774 NOS1P29475 1434 aa21.71■■□□□ 1.07
XRCC3-207ENST00000554774 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
XRCC3-207ENST00000554774 ADGRB3O60242 1522 aa21.68■■□□□ 1.06
XRCC3-207ENST00000554774 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
XRCC3-207ENST00000554774 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
XRCC3-207ENST00000554774 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
XRCC3-207ENST00000554774 TET3O43151 1660 aa21.64■■□□□ 1.05
XRCC3-207ENST00000554774 KCNA6P17658 529 aa21.64■■□□□ 1.05
XRCC3-207ENST00000554774 BCANQ96GW7 911 aa21.64■■□□□ 1.05
XRCC3-207ENST00000554774 RPRD2Q5VT52 1461 aaKnown RBP21.64■■□□□ 1.05
XRCC3-207ENST00000554774 TMEM94Q12767 1356 aa21.62■■□□□ 1.05
XRCC3-207ENST00000554774 MYO5BQ9ULV0 1848 aa21.6■■□□□ 1.05
XRCC3-207ENST00000554774 PROSER2Q86WR7 435 aaPredicted RBP21.6■■□□□ 1.05
XRCC3-207ENST00000554774 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms