RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
CNIH1-204ENST00000554683 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
CNIH1-204ENST00000554683 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
CNIH1-204ENST00000554683 TSPY4P0CV99 314 aa16.48■□□□□ 0.23
CNIH1-204ENST00000554683 TSPY10P0CW01 314 aa16.48■□□□□ 0.23
CNIH1-204ENST00000554683 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
CNIH1-204ENST00000554683 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
CNIH1-204ENST00000554683 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
CNIH1-204ENST00000554683 MROH1Q8NDA8 1641 aa16.46■□□□□ 0.23
CNIH1-204ENST00000554683 KIF15Q9NS87 1388 aa16.46■□□□□ 0.23
CNIH1-204ENST00000554683 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
CNIH1-204ENST00000554683 DEPDC5O75140 1603 aa16.45■□□□□ 0.22
CNIH1-204ENST00000554683 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
CNIH1-204ENST00000554683 PTPRMP28827 1452 aa16.44■□□□□ 0.22
CNIH1-204ENST00000554683 FAM135AQ9P2D6 1515 aa16.44■□□□□ 0.22
CNIH1-204ENST00000554683 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
CNIH1-204ENST00000554683 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
CNIH1-204ENST00000554683 C3P01024 1663 aa16.43■□□□□ 0.22
CNIH1-204ENST00000554683 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
CNIH1-204ENST00000554683 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
CNIH1-204ENST00000554683 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
CNIH1-204ENST00000554683 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
CNIH1-204ENST00000554683 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
CNIH1-204ENST00000554683 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CNIH1-204ENST00000554683 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
CNIH1-204ENST00000554683 MLECQ14165 292 aa16.4■□□□□ 0.22
CNIH1-204ENST00000554683 CEP152O94986 1710 aa16.39■□□□□ 0.21
CNIH1-204ENST00000554683 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CNIH1-204ENST00000554683 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
CNIH1-204ENST00000554683 UNC13BO14795 1591 aa16.37■□□□□ 0.21
CNIH1-204ENST00000554683 ABCC3O15438 1527 aa16.36■□□□□ 0.21
CNIH1-204ENST00000554683 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
CNIH1-204ENST00000554683 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
CNIH1-204ENST00000554683 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
CNIH1-204ENST00000554683 KIF3BO15066 747 aa16.34■□□□□ 0.21
CNIH1-204ENST00000554683 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
CNIH1-204ENST00000554683 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
CNIH1-204ENST00000554683 ITGAEP38570 1179 aa16.31■□□□□ 0.2
CNIH1-204ENST00000554683 GGT6Q6P531 493 aa16.3■□□□□ 0.2
CNIH1-204ENST00000554683 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
CNIH1-204ENST00000554683 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
CNIH1-204ENST00000554683 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
CNIH1-204ENST00000554683 NAIPQ13075 1403 aa16.28■□□□□ 0.2
CNIH1-204ENST00000554683 PZPP20742 1482 aa16.28■□□□□ 0.2
CNIH1-204ENST00000554683 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.2
CNIH1-204ENST00000554683 EFCAB6Q5THR3 1501 aa16.27■□□□□ 0.2
CNIH1-204ENST00000554683 TET3O43151 1660 aa16.27■□□□□ 0.19
CNIH1-204ENST00000554683 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.19
CNIH1-204ENST00000554683 NPATQ14207 1427 aa16.27■□□□□ 0.19
CNIH1-204ENST00000554683 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
CNIH1-204ENST00000554683 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
CNIH1-204ENST00000554683 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
CNIH1-204ENST00000554683 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
CNIH1-204ENST00000554683 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
CNIH1-204ENST00000554683 WASHC2CQ9Y4E1 1318 aa16.22■□□□□ 0.19
CNIH1-204ENST00000554683 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
CNIH1-204ENST00000554683 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
CNIH1-204ENST00000554683 KANK1Q14678 1352 aa16.21■□□□□ 0.19
CNIH1-204ENST00000554683 ERVK-7P63135 1459 aa16.21■□□□□ 0.19
CNIH1-204ENST00000554683 E9PCH4 1651 aa16.2■□□□□ 0.18
CNIH1-204ENST00000554683 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
CNIH1-204ENST00000554683 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
CNIH1-204ENST00000554683 UHRF1BP1Q6BDS2 1440 aa16.18■□□□□ 0.18
CNIH1-204ENST00000554683 RPRD2Q5VT52 1461 aaKnown RBP16.17■□□□□ 0.18
CNIH1-204ENST00000554683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
CNIH1-204ENST00000554683 SYNMO15061 1565 aa16.17■□□□□ 0.18
CNIH1-204ENST00000554683 TNRQ92752 1358 aa16.14■□□□□ 0.17
CNIH1-204ENST00000554683 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
CNIH1-204ENST00000554683 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
CNIH1-204ENST00000554683 NUP155O75694 1391 aa16.13■□□□□ 0.17
CNIH1-204ENST00000554683 NOS1P29475 1434 aa16.12■□□□□ 0.17
CNIH1-204ENST00000554683 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
CNIH1-204ENST00000554683 PIK3C2BO00750 1634 aa16.12■□□□□ 0.17
CNIH1-204ENST00000554683 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
CNIH1-204ENST00000554683 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
CNIH1-204ENST00000554683 KDM5AP29375 1690 aaKnown RBP16.11■□□□□ 0.17
CNIH1-204ENST00000554683 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
CNIH1-204ENST00000554683 STRCQ7RTU9 1775 aa16.09■□□□□ 0.17
CNIH1-204ENST00000554683 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
CNIH1-204ENST00000554683 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
CNIH1-204ENST00000554683 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
CNIH1-204ENST00000554683 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
CNIH1-204ENST00000554683 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
CNIH1-204ENST00000554683 TRPM2O94759 1503 aa16.05■□□□□ 0.16
CNIH1-204ENST00000554683 PLA2R1Q13018 1463 aa16.05■□□□□ 0.16
CNIH1-204ENST00000554683 HSPA2P54652 639 aa16.04■□□□□ 0.16
CNIH1-204ENST00000554683 CLTCL1P53675 1640 aa16.03■□□□□ 0.16
CNIH1-204ENST00000554683 PTPRTO14522 1441 aa16.02■□□□□ 0.16
CNIH1-204ENST00000554683 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
CNIH1-204ENST00000554683 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
CNIH1-204ENST00000554683 SLIT1O75093 1534 aa15.99■□□□□ 0.15
CNIH1-204ENST00000554683 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
CNIH1-204ENST00000554683 ARHGAP23Q9P227 1491 aa15.98■□□□□ 0.15
CNIH1-204ENST00000554683 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
CNIH1-204ENST00000554683 KIF1BO60333 1816 aa15.97■□□□□ 0.15
CNIH1-204ENST00000554683 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
CNIH1-204ENST00000554683 PKD2Q13563 968 aa15.95■□□□□ 0.14
CNIH1-204ENST00000554683 IQGAP1P46940 1657 aa15.95■□□□□ 0.14
CNIH1-204ENST00000554683 HRCP23327 699 aa15.94■□□□□ 0.14
CNIH1-204ENST00000554683 IDI1Q13907 227 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms