RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
PPP4R3A-204ENST00000554574 NPDC1Q9NQX5 325 aaPredicted RBP8.09□□□□□ -1.11
PPP4R3A-204ENST00000554574 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
PPP4R3A-204ENST00000554574 SLC34A2O95436 690 aa8.08□□□□□ -1.12
PPP4R3A-204ENST00000554574 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
PPP4R3A-204ENST00000554574 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
PPP4R3A-204ENST00000554574 SLC39A7Q92504 469 aa8.08□□□□□ -1.12
PPP4R3A-204ENST00000554574 POTEIP0CG38 1075 aa8.07□□□□□ -1.12
PPP4R3A-204ENST00000554574 MAP3K7O43318 606 aa8.06□□□□□ -1.12
PPP4R3A-204ENST00000554574 PHF14O94880 888 aa8.06□□□□□ -1.12
PPP4R3A-204ENST00000554574 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
PPP4R3A-204ENST00000554574 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
PPP4R3A-204ENST00000554574 C7P10643 843 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 EPAS1Q99814 870 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 METRNQ9UJH8 293 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 TSR1Q2NL82 804 aaKnown RBP8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 PHOX2BQ99453 314 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
PPP4R3A-204ENST00000554574 ONECUT3O60422 494 aaPredicted RBP8.03□□□□□ -1.12
PPP4R3A-204ENST00000554574 MDM2Q00987 491 aaPredicted RBP8.03□□□□□ -1.12
PPP4R3A-204ENST00000554574 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.13
PPP4R3A-204ENST00000554574 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 PCDHGA4Q9Y5G9 962 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 BICRAQ9NZM4 1560 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 UBTFP17480 764 aaKnown RBP8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 CLCN1P35523 988 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 FLIIQ13045 1269 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 TYW1BQ6NUM6 668 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 GPCPD1Q9NPB8 672 aa8.01□□□□□ -1.13
PPP4R3A-204ENST00000554574 FAM161AQ3B820 660 aa8□□□□□ -1.13
PPP4R3A-204ENST00000554574 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
PPP4R3A-204ENST00000554574 KDM4FA0A1W2PPD8 638 aa7.99□□□□□ -1.13
PPP4R3A-204ENST00000554574 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
PPP4R3A-204ENST00000554574 RSF1Q96T23 1441 aaPredicted RBP7.99□□□□□ -1.13
PPP4R3A-204ENST00000554574 JPH4Q96JJ6 628 aa7.99□□□□□ -1.13
PPP4R3A-204ENST00000554574 NLRP7Q8WX94 980 aa7.98□□□□□ -1.13
PPP4R3A-204ENST00000554574 SSTR3P32745 418 aaPredicted RBP7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 FBXW7Q969H0 707 aa7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 CECR2Q9BXF3 1484 aa7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 METTL3Q86U44 580 aaKnown RBP7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 BAZ1AQ9NRL2 1556 aaPredicted RBP7.97□□□□□ -1.13
PPP4R3A-204ENST00000554574 FOSBP53539 338 aa7.96□□□□□ -1.13
PPP4R3A-204ENST00000554574 PADI6Q6TGC4 694 aa7.96□□□□□ -1.13
PPP4R3A-204ENST00000554574 ARID3AQ99856 593 aa7.96□□□□□ -1.13
PPP4R3A-204ENST00000554574 BEGAINQ9BUH8 593 aa7.95□□□□□ -1.14
PPP4R3A-204ENST00000554574 FAM217BQ9NTX9 383 aaPredicted RBP7.95□□□□□ -1.14
PPP4R3A-204ENST00000554574 MROH2BQ7Z745 1585 aa7.95□□□□□ -1.14
PPP4R3A-204ENST00000554574 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
PPP4R3A-204ENST00000554574 ADGRG1Q9Y653 693 aa7.95□□□□□ -1.14
PPP4R3A-204ENST00000554574 MCM6Q14566 821 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 C6orf132Q5T0Z8 1188 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 PXYLP1Q8TE99 480 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 SMARCA4P51532 1647 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 APBB1O00213 710 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 OATP04181 439 aa7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
PPP4R3A-204ENST00000554574 ZNF454Q8N9F8 522 aa7.92□□□□□ -1.14
PPP4R3A-204ENST00000554574 WIZO95785 1651 aa7.92□□□□□ -1.14
PPP4R3A-204ENST00000554574 TTC13Q8NBP0 860 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 CERKQ8TCT0 537 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 ZDHHC16Q969W1 377 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 A6NJR5 290 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 ADAM33Q9BZ11 813 aa7.91□□□□□ -1.14
PPP4R3A-204ENST00000554574 NUDT7P0C024 238 aa7.9□□□□□ -1.14
PPP4R3A-204ENST00000554574 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.15
PPP4R3A-204ENST00000554574 RBM27Q9P2N5 1060 aaKnown RBP7.9□□□□□ -1.15
PPP4R3A-204ENST00000554574 TRAK2O60296 914 aa7.89□□□□□ -1.15
PPP4R3A-204ENST00000554574 PCDH10Q9P2E7 1040 aa7.89□□□□□ -1.15
PPP4R3A-204ENST00000554574 ARSIQ5FYB1 569 aa7.88□□□□□ -1.15
PPP4R3A-204ENST00000554574 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.88□□□□□ -1.15
PPP4R3A-204ENST00000554574 HOXB3P14651 431 aaPredicted RBP7.87□□□□□ -1.15
PPP4R3A-204ENST00000554574 PRSS12P56730 875 aa7.87□□□□□ -1.15
PPP4R3A-204ENST00000554574 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
PPP4R3A-204ENST00000554574 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 POTEMA6NI47 508 aa7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
PPP4R3A-204ENST00000554574 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
PPP4R3A-204ENST00000554574 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
PPP4R3A-204ENST00000554574 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
PPP4R3A-204ENST00000554574 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
PPP4R3A-204ENST00000554574 RBM46Q8TBY0 533 aaKnown RBP7.84□□□□□ -1.15
PPP4R3A-204ENST00000554574 POTEJP0CG39 1038 aa7.84□□□□□ -1.16
PPP4R3A-204ENST00000554574 COL9A1P20849 921 aa7.84□□□□□ -1.16
PPP4R3A-204ENST00000554574 PROSER2Q86WR7 435 aaPredicted RBP7.84□□□□□ -1.16
PPP4R3A-204ENST00000554574 TOP2AP11388 1531 aaKnown RBP7.83□□□□□ -1.16
PPP4R3A-204ENST00000554574 GPR153Q6NV75 609 aa7.83□□□□□ -1.16
PPP4R3A-204ENST00000554574 LIMD1Q9UGP4 676 aa7.83□□□□□ -1.16
PPP4R3A-204ENST00000554574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.82□□□□□ -1.16
PPP4R3A-204ENST00000554574 RCCD1A6NED2 376 aa7.82□□□□□ -1.16
PPP4R3A-204ENST00000554574 POTEB2H3BUK9 544 aa7.82□□□□□ -1.16
PPP4R3A-204ENST00000554574 RFC5P40937 340 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms