RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 WASHC2CQ9Y4E1 1318 aa42.21■■■■■ 4.35
KTN1-215ENST00000554567 ILDR2Q71H61 639 aa42.21■■■■■ 4.35
KTN1-215ENST00000554567 TSPY4P0CV99 314 aa42.2■■■■■ 4.35
KTN1-215ENST00000554567 TSPY10P0CW01 314 aa42.2■■■■■ 4.35
KTN1-215ENST00000554567 LOC105371045A0A1W2PR82 267 aa42.19■■■■■ 4.34
KTN1-215ENST00000554567 DNMT1P26358 1616 aaKnown RBP42.17■■■■■ 4.34
KTN1-215ENST00000554567 TNRQ92752 1358 aa42.17■■■■■ 4.34
KTN1-215ENST00000554567 UBAP1LF5GYI3 381 aa42.17■■■■■ 4.34
KTN1-215ENST00000554567 KDM5DQ9BY66 1539 aa42.15■■■■■ 4.34
KTN1-215ENST00000554567 PZPP20742 1482 aa42.11■■■■■ 4.33
KTN1-215ENST00000554567 ARHGEF5Q12774 1597 aa42.1■■■■■ 4.33
KTN1-215ENST00000554567 VPS8Q8N3P4 1428 aa42.09■■■■■ 4.33
KTN1-215ENST00000554567 LRRC9Q6ZRR7 1453 aa42.09■■■■■ 4.33
KTN1-215ENST00000554567 SPATA31D1Q6ZQQ2 1576 aa42.09■■■■■ 4.33
KTN1-215ENST00000554567 FAM135AQ9P2D6 1515 aa42.05■■■■■ 4.32
KTN1-215ENST00000554567 KANK4Q5T7N3 995 aaPredicted RBP42.02■■■■■ 4.32
KTN1-215ENST00000554567 MIA2Q96PC5 1412 aa42■■■■■ 4.31
KTN1-215ENST00000554567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42■■■■■ 4.31
KTN1-215ENST00000554567 ANKLE2Q86XL3 938 aa41.98■■■■■ 4.31
KTN1-215ENST00000554567 THEMISQ8N1K5 641 aaPredicted RBP41.98■■■■■ 4.31
KTN1-215ENST00000554567 POLR1AO95602 1720 aaPredicted RBP41.97■■■■■ 4.31
KTN1-215ENST00000554567 NEURL4Q96JN8 1562 aa41.94■■■■■ 4.3
KTN1-215ENST00000554567 NLRP1Q9C000 1473 aa41.92■■■■■ 4.3
KTN1-215ENST00000554567 UGGT1Q9NYU2 1555 aa41.89■■■■■ 4.3
KTN1-215ENST00000554567 MAST1Q9Y2H9 1570 aa41.89■■■■■ 4.3
KTN1-215ENST00000554567 SOCS7O14512 581 aa41.89■■■■■ 4.3
KTN1-215ENST00000554567 SCAF1Q9H7N4 1312 aaKnown RBP41.89■■■■■ 4.3
KTN1-215ENST00000554567 MYOM3Q5VTT5 1437 aa41.86■■■■■ 4.29
KTN1-215ENST00000554567 SHANK2Q9UPX8 1470 aa41.86■■■■■ 4.29
KTN1-215ENST00000554567 RNF17Q9BXT8 1623 aaKnown RBP41.86■■■■■ 4.29
KTN1-215ENST00000554567 ABCC3O15438 1527 aa41.85■■■■■ 4.29
KTN1-215ENST00000554567 MAP3K1Q13233 1512 aa41.85■■■■■ 4.29
KTN1-215ENST00000554567 PIP4K2BP78356 416 aa41.84■■■■■ 4.29
KTN1-215ENST00000554567 CPS1P31327 1500 aa41.82■■■■■ 4.29
KTN1-215ENST00000554567 NPHP4O75161 1426 aaPredicted RBP41.8■■■■■ 4.28
KTN1-215ENST00000554567 TOM1O60784 492 aa41.79■■■■■ 4.28
KTN1-215ENST00000554567 ZC3H13Q5T200 1668 aaKnown RBP41.77■■■■■ 4.28
KTN1-215ENST00000554567 EIF2AK4Q9P2K8 1649 aaKnown RBP41.77■■■■■ 4.28
KTN1-215ENST00000554567 DEPDC5O75140 1603 aa41.73■■■■■ 4.27
KTN1-215ENST00000554567 MED14O60244 1454 aa41.73■■■■■ 4.27
KTN1-215ENST00000554567 ERVK-7P63135 1459 aa41.73■■■■■ 4.27
KTN1-215ENST00000554567 VWDEQ8N2E2 1590 aa41.73■■■■■ 4.27
KTN1-215ENST00000554567 CFAP65Q6ZU64 1925 aaKnown RBP41.72■■■■■ 4.27
KTN1-215ENST00000554567 HSPA1LP34931 641 aa41.72■■■■■ 4.27
KTN1-215ENST00000554567 MROH1Q8NDA8 1641 aa41.72■■■■■ 4.27
KTN1-215ENST00000554567 DUOX2Q9NRD8 1548 aa41.7■■■■■ 4.27
KTN1-215ENST00000554567 CEP152O94986 1710 aa41.7■■■■■ 4.27
KTN1-215ENST00000554567 APLP2Q06481 763 aa41.7■■■■■ 4.27
KTN1-215ENST00000554567 RRP7BPQ9NSQ0 103 aa41.69■■■■■ 4.26
KTN1-215ENST00000554567 KIF15Q9NS87 1388 aa41.66■■■■■ 4.26
KTN1-215ENST00000554567 IQGAP1P46940 1657 aa41.66■■■■■ 4.26
KTN1-215ENST00000554567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.63■■■■■ 4.253e-7■■□□□ 13.3
KTN1-215ENST00000554567 ABCC5O15440 1437 aa41.61■■■■■ 4.25
KTN1-215ENST00000554567 PTPN23Q9H3S7 1636 aa41.58■■■■■ 4.25
KTN1-215ENST00000554567 UBR1Q8IWV7 1749 aa41.55■■■■■ 4.24
KTN1-215ENST00000554567 CROCC2H7BZ55 1655 aa41.54■■■■■ 4.24
KTN1-215ENST00000554567 ERBINQ96RT1 1412 aa41.53■■■■■ 4.24
KTN1-215ENST00000554567 TXNDC2Q86VQ3 553 aa41.52■■■■■ 4.24
KTN1-215ENST00000554567 CHIC2Q9UKJ5 165 aa41.52■■■■■ 4.24
KTN1-215ENST00000554567 DAPK1P53355 1430 aa41.52■■■■■ 4.24
KTN1-215ENST00000554567 STRCP1A6NGW2 1772 aa41.51■■■■■ 4.24
KTN1-215ENST00000554567 PRDM15P57071 1507 aaPredicted RBP41.51■■■■■ 4.24
KTN1-215ENST00000554567 LTKP29376 864 aa41.5■■■■■ 4.23
KTN1-215ENST00000554567 SENP3Q9H4L4 574 aaPredicted RBP41.49■■■■■ 4.23
KTN1-215ENST00000554567 ARHGAP31Q2M1Z3 1444 aa41.49■■■■■ 4.23
KTN1-215ENST00000554567 SCAF11Q99590 1463 aaKnown RBP41.48■■■■■ 4.23
KTN1-215ENST00000554567 LRRC7Q96NW7 1537 aa41.48■■■■■ 4.23
KTN1-215ENST00000554567 FGD6Q6ZV73 1430 aa41.46■■■■■ 4.23
KTN1-215ENST00000554567 KANK1Q14678 1352 aa41.46■■■■■ 4.23
KTN1-215ENST00000554567 ALKQ9UM73 1620 aa41.45■■■■■ 4.23
KTN1-215ENST00000554567 STAG3Q9UJ98 1225 aa41.43■■■■■ 4.22
KTN1-215ENST00000554567 EID1Q9Y6B2 187 aa41.43■■■■■ 4.22
KTN1-215ENST00000554567 MED1Q15648 1581 aaPredicted RBP41.42■■■■■ 4.22
KTN1-215ENST00000554567 ARHGAP23Q9P227 1491 aa41.41■■■■■ 4.22
KTN1-215ENST00000554567 ANKRD30AQ9BXX3 1397 aa41.4■■■■■ 4.22
KTN1-215ENST00000554567 SLIT1O75093 1534 aa41.39■■■■■ 4.22
KTN1-215ENST00000554567 SYNMO15061 1565 aa41.37■■■■■ 4.21
KTN1-215ENST00000554567 PIK3C2BO00750 1634 aa41.36■■■■■ 4.21
KTN1-215ENST00000554567 IDI1Q13907 227 aa41.31■■■■■ 4.2
KTN1-215ENST00000554567 TMEM2Q9UHN6 1383 aa41.31■■■■■ 4.2
KTN1-215ENST00000554567 PHF23Q9BUL5 403 aaPredicted RBP41.28■■■■■ 4.2
KTN1-215ENST00000554567 FAM50AQ14320 339 aaKnown RBP41.26■■■■■ 4.2
KTN1-215ENST00000554567 LMTK2Q8IWU2 1503 aa41.24■■■■■ 4.19
KTN1-215ENST00000554567 EFCAB6Q5THR3 1501 aa41.23■■■■■ 4.19
KTN1-215ENST00000554567 SLC26A8Q96RN1 970 aa41.18■■■■■ 4.18
KTN1-215ENST00000554567 XIRP1Q702N8 1843 aaKnown RBP41.16■■■■■ 4.18
KTN1-215ENST00000554567 KDM5AP29375 1690 aaKnown RBP41.13■■■■■ 4.18
KTN1-215ENST00000554567 NOS1P29475 1434 aa41.13■■■■■ 4.17
KTN1-215ENST00000554567 ADGRL2O95490 1459 aa41.13■■■■■ 4.17
KTN1-215ENST00000554567 BCANQ96GW7 911 aa41.12■■■■■ 4.17
KTN1-215ENST00000554567 KCNA6P17658 529 aa41.11■■■■■ 4.17
KTN1-215ENST00000554567 SLC52A1Q9NWF4 448 aa41.1■■■■■ 4.17
KTN1-215ENST00000554567 TMEM94Q12767 1356 aa41.09■■■■■ 4.17
KTN1-215ENST00000554567 ANKRD50Q9ULJ7 1429 aa41.09■■■■■ 4.17
KTN1-215ENST00000554567 PROSER2Q86WR7 435 aaPredicted RBP41.08■■■■■ 4.17
KTN1-215ENST00000554567 RBM33Q96EV2 1170 aaKnown RBP41.08■■■■■ 4.17
KTN1-215ENST00000554567 ADGRB3O60242 1522 aa41.06■■■■■ 4.16
KTN1-215ENST00000554567 TET3O43151 1660 aa41.04■■■■■ 4.16
KTN1-215ENST00000554567 FAM135BQ49AJ0 1406 aa40.97■■■■■ 4.15
KTN1-215ENST00000554567 RPRD2Q5VT52 1461 aaKnown RBP40.96■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms