RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 HOMEZQ8IX15 550 aa3.95□□□□□ -1.78
PRPF39-207ENST00000554439 MICALL2Q8IY33 904 aa3.95□□□□□ -1.78
PRPF39-207ENST00000554439 ARHGEF1Q92888 912 aaKnown RBP3.95□□□□□ -1.78
PRPF39-207ENST00000554439 PPP1R37O75864 691 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 SLC24A3Q9HC58 644 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 LHX6Q9UPM6 363 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 SEMA3EO15041 775 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 PTPN5P54829 565 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 ACIN1Q9UKV3 1341 aaKnown RBP3.94□□□□□ -1.78
PRPF39-207ENST00000554439 TESPA1A2RU30 521 aaPredicted RBP3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RBAK-RBAKDNI3L0D1 243 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 AXIN2Q9Y2T1 843 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 ABCC9O60706 1549 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RSF1Q96T23 1441 aaPredicted RBP3.93□□□□□ -1.78
PRPF39-207ENST00000554439 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 FBXO22Q8NEZ5 403 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RB1CC1Q8TDY2 1594 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 ZMYND10O75800 440 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 TTBK1Q5TCY1 1321 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-207ENST00000554439 NEUROD2Q15784 382 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 E2F4Q16254 413 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 CCER1Q8TC90 406 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-207ENST00000554439 NCKAP5LQ9HCH0 1330 aa3.91□□□□□ -1.78
PRPF39-207ENST00000554439 SUZ12Q15022 739 aaKnown RBP3.9□□□□□ -1.78
PRPF39-207ENST00000554439 V9GY48 417 aaPredicted RBP3.9□□□□□ -1.78
PRPF39-207ENST00000554439 SCRIBQ14160 1630 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 FAM181BA6NEQ2 426 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 GOLGA8CPA6NN73 597 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 DIEXFQ68CQ4 756 aaKnown RBP3.9□□□□□ -1.79
PRPF39-207ENST00000554439 CABP2Q9NPB3 220 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-207ENST00000554439 PCDHGA4Q9Y5G9 962 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 SOX12O15370 315 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 WIPF1O43516 503 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 PPP4R3BQ5MIZ7 849 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 KHSRPQ92945 711 aaKnown RBP eCLIP3.89□□□□□ -1.795e-10■■■□□ 16.6
PRPF39-207ENST00000554439 NUDT7P0C024 238 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 KCNC4Q03721 635 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 DMRTA1Q5VZB9 504 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 EFCAB3Q8N7B9 438 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 PHF8Q9UPP1 1060 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 ARIH1Q9Y4X5 557 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 MFSD10Q14728 455 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 BARGINQ6ZT62 677 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 WNT2BQ93097 391 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 YTHDC1Q96MU7 727 aaKnown RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 CENPBP07199 599 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 MS4A4AQ96JQ5 239 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 BHMG1C9JSJ3 638 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-207ENST00000554439 NLRP6P59044 892 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 CRISPLD2Q9H0B8 497 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 GPBP1L1Q9HC44 474 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-207ENST00000554439 CAMK2BQ13554 666 aa3.85□□□□□ -1.79
PRPF39-207ENST00000554439 CECR2Q9BXF3 1484 aa3.85□□□□□ -1.79
PRPF39-207ENST00000554439 LARP6Q9BRS8 491 aaKnown RBP3.85□□□□□ -1.79
PRPF39-207ENST00000554439 DGAT1O75907 488 aa3.84□□□□□ -1.79
PRPF39-207ENST00000554439 RBM26Q5T8P6 1007 aaKnown RBP3.84□□□□□ -1.79
PRPF39-207ENST00000554439 UBTFP17480 764 aaKnown RBP3.84□□□□□ -1.8
PRPF39-207ENST00000554439 MLLT3P42568 568 aaPredicted RBP3.84□□□□□ -1.8
PRPF39-207ENST00000554439 MROH2BQ7Z745 1585 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 PDE4AP27815 886 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 SMYD5Q6GMV2 418 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 MRPL50Q8N5N7 158 aaKnown RBP3.83□□□□□ -1.8
PRPF39-207ENST00000554439 DDX27Q96GQ7 796 aaKnown RBP3.83□□□□□ -1.8
PRPF39-207ENST00000554439 NBPF3Q9H094 633 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 WIZO95785 1651 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 PSEN2P49810 448 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 AK7Q96M32 723 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 IL27Q8NEV9 243 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 KDM4CQ9H3R0 1056 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 ANO8Q9HCE9 1232 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-207ENST00000554439 KDM4FA0A1W2PPD8 638 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 KIF3CO14782 793 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 MYT1Q01538 1121 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 WFS1O76024 890 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 ZMYND15Q9H091 742 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 ABCC8Q09428 1581 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 TRIM66O15016 1216 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 GPR37O15354 613 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 CEP162Q5TB80 1403 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 CCDC88BA6NC98 1476 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 ANKK1Q8NFD2 765 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 C1orf115Q9H7X2 142 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 PDE4DQ08499 809 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PDZRN3Q9UPQ7 1066 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 SOGA1O94964 1423 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PRKD2Q9BZL6 878 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PODXL2Q9NZ53 605 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 WRNQ14191 1432 aaPredicted RBP eCLIP3.78□□□□□ -1.8
PRPF39-207ENST00000554439 TBC1D12O60347 775 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 EMILIN3Q9NT22 766 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 EIF4G1Q04637 1599 aaKnown RBP3.78□□□□□ -1.8
PRPF39-207ENST00000554439 LAPTM4BQ86VI4 370 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 RUSC2Q8N2Y8 1516 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 FAM117AQ9C073 453 aa3.78□□□□□ -1.81
PRPF39-207ENST00000554439 PLEKHG3A1L390 1219 aa3.77□□□□□ -1.81
PRPF39-207ENST00000554439 PTCD2Q8WV60 388 aaKnown RBP3.77□□□□□ -1.81
PRPF39-207ENST00000554439 KRI1Q8N9T8 703 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms