RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 APLP2Q06481 763 aa16.37■□□□□ 0.21
PTCD2P1-201ENST00000554393 MAST1Q9Y2H9 1570 aa16.37■□□□□ 0.21
PTCD2P1-201ENST00000554393 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
PTCD2P1-201ENST00000554393 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
PTCD2P1-201ENST00000554393 HSPA2P54652 639 aa16.33■□□□□ 0.2
PTCD2P1-201ENST00000554393 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
PTCD2P1-201ENST00000554393 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
PTCD2P1-201ENST00000554393 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
PTCD2P1-201ENST00000554393 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
PTCD2P1-201ENST00000554393 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
PTCD2P1-201ENST00000554393 PTPN23Q9H3S7 1636 aa16.3■□□□□ 0.2
PTCD2P1-201ENST00000554393 NPATQ14207 1427 aa16.3■□□□□ 0.2
PTCD2P1-201ENST00000554393 TSPY4P0CV99 314 aa16.3■□□□□ 0.2
PTCD2P1-201ENST00000554393 TSPY10P0CW01 314 aa16.3■□□□□ 0.2
PTCD2P1-201ENST00000554393 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
PTCD2P1-201ENST00000554393 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
PTCD2P1-201ENST00000554393 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
PTCD2P1-201ENST00000554393 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
PTCD2P1-201ENST00000554393 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.19
PTCD2P1-201ENST00000554393 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
PTCD2P1-201ENST00000554393 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.19
PTCD2P1-201ENST00000554393 KDM5DQ9BY66 1539 aa16.25■□□□□ 0.19
PTCD2P1-201ENST00000554393 GGT6Q6P531 493 aa16.25■□□□□ 0.19
PTCD2P1-201ENST00000554393 ZNF142P52746 1687 aaPredicted RBP16.24■□□□□ 0.19
PTCD2P1-201ENST00000554393 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
PTCD2P1-201ENST00000554393 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
PTCD2P1-201ENST00000554393 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
PTCD2P1-201ENST00000554393 DUOX2Q9NRD8 1548 aa16.23■□□□□ 0.19
PTCD2P1-201ENST00000554393 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
PTCD2P1-201ENST00000554393 PTPRKQ15262 1439 aa16.22■□□□□ 0.19
PTCD2P1-201ENST00000554393 KIF3BO15066 747 aa16.22■□□□□ 0.19
PTCD2P1-201ENST00000554393 ABCC5O15440 1437 aa16.21■□□□□ 0.19
PTCD2P1-201ENST00000554393 DAPK1P53355 1430 aa16.2■□□□□ 0.18
PTCD2P1-201ENST00000554393 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
PTCD2P1-201ENST00000554393 PZPP20742 1482 aa16.18■□□□□ 0.18
PTCD2P1-201ENST00000554393 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
PTCD2P1-201ENST00000554393 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
PTCD2P1-201ENST00000554393 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
PTCD2P1-201ENST00000554393 ABCC3O15438 1527 aa16.16■□□□□ 0.18
PTCD2P1-201ENST00000554393 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
PTCD2P1-201ENST00000554393 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
PTCD2P1-201ENST00000554393 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
PTCD2P1-201ENST00000554393 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
PTCD2P1-201ENST00000554393 CAMSAP1Q5T5Y3 1602 aa16.15■□□□□ 0.18
PTCD2P1-201ENST00000554393 CEP152O94986 1710 aa16.14■□□□□ 0.17
PTCD2P1-201ENST00000554393 PTPRTO14522 1441 aa16.13■□□□□ 0.17
PTCD2P1-201ENST00000554393 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
PTCD2P1-201ENST00000554393 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
PTCD2P1-201ENST00000554393 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
PTCD2P1-201ENST00000554393 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
PTCD2P1-201ENST00000554393 TNRQ92752 1358 aa16.11■□□□□ 0.17
PTCD2P1-201ENST00000554393 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
PTCD2P1-201ENST00000554393 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
PTCD2P1-201ENST00000554393 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
PTCD2P1-201ENST00000554393 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 ERVK-7P63135 1459 aa16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
PTCD2P1-201ENST00000554393 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
PTCD2P1-201ENST00000554393 IQSEC2Q5JU85 1478 aa16.05■□□□□ 0.16
PTCD2P1-201ENST00000554393 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
PTCD2P1-201ENST00000554393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTCD2P1-201ENST00000554393 PKD2Q13563 968 aa16.04■□□□□ 0.16
PTCD2P1-201ENST00000554393 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
PTCD2P1-201ENST00000554393 KANK1Q14678 1352 aa16.03■□□□□ 0.16
PTCD2P1-201ENST00000554393 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
PTCD2P1-201ENST00000554393 ROCK1Q13464 1354 aa16.01■□□□□ 0.15
PTCD2P1-201ENST00000554393 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
PTCD2P1-201ENST00000554393 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
PTCD2P1-201ENST00000554393 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
PTCD2P1-201ENST00000554393 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
PTCD2P1-201ENST00000554393 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
PTCD2P1-201ENST00000554393 NCKAP5LQ9HCH0 1330 aa15.99■□□□□ 0.15
PTCD2P1-201ENST00000554393 UNC13BO14795 1591 aa15.99■□□□□ 0.15
PTCD2P1-201ENST00000554393 KDM5AP29375 1690 aaKnown RBP15.99■□□□□ 0.15
PTCD2P1-201ENST00000554393 MED1Q15648 1581 aaPredicted RBP15.98■□□□□ 0.15
PTCD2P1-201ENST00000554393 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
PTCD2P1-201ENST00000554393 TET3O43151 1660 aa15.96■□□□□ 0.15
PTCD2P1-201ENST00000554393 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
PTCD2P1-201ENST00000554393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTCD2P1-201ENST00000554393 MED14O60244 1454 aa15.96■□□□□ 0.14
PTCD2P1-201ENST00000554393 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
PTCD2P1-201ENST00000554393 RPRD2Q5VT52 1461 aaKnown RBP15.95■□□□□ 0.14
PTCD2P1-201ENST00000554393 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
PTCD2P1-201ENST00000554393 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
PTCD2P1-201ENST00000554393 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
PTCD2P1-201ENST00000554393 SYNMO15061 1565 aa15.92■□□□□ 0.14
PTCD2P1-201ENST00000554393 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
PTCD2P1-201ENST00000554393 SLIT1O75093 1534 aa15.92■□□□□ 0.14
PTCD2P1-201ENST00000554393 NOS1P29475 1434 aa15.92■□□□□ 0.14
PTCD2P1-201ENST00000554393 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
PTCD2P1-201ENST00000554393 PPARGC1BQ86YN6 1023 aaKnown RBP15.9■□□□□ 0.14
PTCD2P1-201ENST00000554393 NPHP4O75161 1426 aaPredicted RBP15.9■□□□□ 0.14
PTCD2P1-201ENST00000554393 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
PTCD2P1-201ENST00000554393 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
PTCD2P1-201ENST00000554393 CPS1P31327 1500 aa15.88■□□□□ 0.13
PTCD2P1-201ENST00000554393 E9PCH4 1651 aa15.87■□□□□ 0.13
PTCD2P1-201ENST00000554393 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms