RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
CHD8-207ENST00000554384 TBC1D12O60347 775 aa11.17□□□□□ -0.62
CHD8-207ENST00000554384 PBX2P40425 430 aa11.16□□□□□ -0.62
CHD8-207ENST00000554384 GPR37O15354 613 aa11.15□□□□□ -0.62
CHD8-207ENST00000554384 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
CHD8-207ENST00000554384 BRPF1P55201 1214 aaPredicted RBP11.14□□□□□ -0.63
CHD8-207ENST00000554384 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
CHD8-207ENST00000554384 ARHGAP33O14559 1287 aa11.1□□□□□ -0.63
CHD8-207ENST00000554384 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
CHD8-207ENST00000554384 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
CHD8-207ENST00000554384 PSEN2P49810 448 aa11.08□□□□□ -0.64
CHD8-207ENST00000554384 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
CHD8-207ENST00000554384 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
CHD8-207ENST00000554384 FECHP22830 423 aa11.07□□□□□ -0.64
CHD8-207ENST00000554384 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
CHD8-207ENST00000554384 RBM33Q96EV2 1170 aaKnown RBP11.05□□□□□ -0.64
CHD8-207ENST00000554384 AK7Q96M32 723 aa11.05□□□□□ -0.64
CHD8-207ENST00000554384 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
CHD8-207ENST00000554384 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
CHD8-207ENST00000554384 HRO43593 1189 aa11.02□□□□□ -0.65
CHD8-207ENST00000554384 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
CHD8-207ENST00000554384 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
CHD8-207ENST00000554384 TRIM66O15016 1216 aa11.01□□□□□ -0.65
CHD8-207ENST00000554384 TK2O00142 265 aa11□□□□□ -0.65
CHD8-207ENST00000554384 PHF14O94880 888 aa11□□□□□ -0.65
CHD8-207ENST00000554384 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
CHD8-207ENST00000554384 GNPATO15228 680 aa10.99□□□□□ -0.65
CHD8-207ENST00000554384 FCHSD2O94868 740 aa10.99□□□□□ -0.65
CHD8-207ENST00000554384 PTGDRQ13258 359 aa10.99□□□□□ -0.65
CHD8-207ENST00000554384 MAP3K7O43318 606 aa10.98□□□□□ -0.65
CHD8-207ENST00000554384 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
CHD8-207ENST00000554384 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
CHD8-207ENST00000554384 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
CHD8-207ENST00000554384 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
CHD8-207ENST00000554384 IRF6O14896 467 aa10.96□□□□□ -0.65
CHD8-207ENST00000554384 HIC1Q14526 733 aa10.96□□□□□ -0.65
CHD8-207ENST00000554384 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
CHD8-207ENST00000554384 EPAS1Q99814 870 aa10.96□□□□□ -0.65
CHD8-207ENST00000554384 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
CHD8-207ENST00000554384 FOSBP53539 338 aa10.95□□□□□ -0.66
CHD8-207ENST00000554384 PDE4DQ08499 809 aa10.95□□□□□ -0.66
CHD8-207ENST00000554384 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
CHD8-207ENST00000554384 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
CHD8-207ENST00000554384 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
CHD8-207ENST00000554384 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
CHD8-207ENST00000554384 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
CHD8-207ENST00000554384 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
CHD8-207ENST00000554384 KDM4CQ9H3R0 1056 aa10.91□□□□□ -0.66
CHD8-207ENST00000554384 PLA2G2EQ9NZK7 142 aa10.91□□□□□ -0.66
CHD8-207ENST00000554384 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
CHD8-207ENST00000554384 VPS9D1Q9Y2B5 631 aa10.9□□□□□ -0.66
CHD8-207ENST00000554384 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
CHD8-207ENST00000554384 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
CHD8-207ENST00000554384 IL27Q8NEV9 243 aa10.89□□□□□ -0.67
CHD8-207ENST00000554384 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
CHD8-207ENST00000554384 KCTD12Q96CX2 325 aaKnown RBP10.89□□□□□ -0.67
CHD8-207ENST00000554384 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
CHD8-207ENST00000554384 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
CHD8-207ENST00000554384 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
CHD8-207ENST00000554384 PHOX2BQ99453 314 aa10.85□□□□□ -0.67
CHD8-207ENST00000554384 PARP9Q8IXQ6 854 aa10.84□□□□□ -0.67
CHD8-207ENST00000554384 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
CHD8-207ENST00000554384 AMHR2Q16671 573 aa10.83□□□□□ -0.68
CHD8-207ENST00000554384 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
CHD8-207ENST00000554384 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
CHD8-207ENST00000554384 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
CHD8-207ENST00000554384 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
CHD8-207ENST00000554384 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
CHD8-207ENST00000554384 PTPREP23469 700 aa10.82□□□□□ -0.68
CHD8-207ENST00000554384 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
CHD8-207ENST00000554384 COL9A1P20849 921 aa10.81□□□□□ -0.68
CHD8-207ENST00000554384 ZBED2Q9BTP6 218 aa10.81□□□□□ -0.68
CHD8-207ENST00000554384 TTLL12Q14166 644 aaPredicted RBP10.8□□□□□ -0.68
CHD8-207ENST00000554384 PTPN5P54829 565 aa10.79□□□□□ -0.68
CHD8-207ENST00000554384 FAM198AQ9UFP1 575 aa10.79□□□□□ -0.68
CHD8-207ENST00000554384 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
CHD8-207ENST00000554384 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
CHD8-207ENST00000554384 PLEKHG3A1L390 1219 aa10.76□□□□□ -0.69
CHD8-207ENST00000554384 PRSS12P56730 875 aa10.76□□□□□ -0.69
CHD8-207ENST00000554384 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
CHD8-207ENST00000554384 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
CHD8-207ENST00000554384 ADGRG1Q9Y653 693 aa10.76□□□□□ -0.69
CHD8-207ENST00000554384 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
CHD8-207ENST00000554384 MS4A1P11836 297 aa10.75□□□□□ -0.69
CHD8-207ENST00000554384 GIGYF2Q6Y7W6 1299 aaKnown RBP10.75□□□□□ -0.69
CHD8-207ENST00000554384 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
CHD8-207ENST00000554384 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
CHD8-207ENST00000554384 THSD4Q6ZMP0 1018 aa10.73□□□□□ -0.69
CHD8-207ENST00000554384 TMUB1Q9BVT8 246 aa10.72□□□□□ -0.69
CHD8-207ENST00000554384 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
CHD8-207ENST00000554384 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
CHD8-207ENST00000554384 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
CHD8-207ENST00000554384 WNT2BQ93097 391 aa10.71□□□□□ -0.69
CHD8-207ENST00000554384 GOLGA8CPA6NN73 597 aa10.69□□□□□ -0.7
CHD8-207ENST00000554384 OATP04181 439 aa10.69□□□□□ -0.7
CHD8-207ENST00000554384 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
CHD8-207ENST00000554384 PPP1R3GB7ZBB8 358 aa10.68□□□□□ -0.7
CHD8-207ENST00000554384 CLCN1P35523 988 aa10.68□□□□□ -0.7
CHD8-207ENST00000554384 GPCPD1Q9NPB8 672 aa10.68□□□□□ -0.7
CHD8-207ENST00000554384 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms