RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
SLIRP-203ENST00000554074 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
SLIRP-203ENST00000554074 GGT6Q6P531 493 aa10.46□□□□□ -0.73
SLIRP-203ENST00000554074 CERKQ8TCT0 537 aa10.46□□□□□ -0.73
SLIRP-203ENST00000554074 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.74
SLIRP-203ENST00000554074 ZC3H13Q5T200 1668 aaKnown RBP10.46□□□□□ -0.74
SLIRP-203ENST00000554074 TSPY4P0CV99 314 aa10.45□□□□□ -0.74
SLIRP-203ENST00000554074 TSPY10P0CW01 314 aa10.45□□□□□ -0.74
SLIRP-203ENST00000554074 ILDR2Q71H61 639 aa10.45□□□□□ -0.74
SLIRP-203ENST00000554074 PZPP20742 1482 aa10.44□□□□□ -0.74
SLIRP-203ENST00000554074 FOXD1Q16676 465 aa10.44□□□□□ -0.74
SLIRP-203ENST00000554074 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-203ENST00000554074 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-203ENST00000554074 DNMT1P26358 1616 aaKnown RBP10.44□□□□□ -0.74
SLIRP-203ENST00000554074 A2ML1A8K2U0 1454 aa10.43□□□□□ -0.74
SLIRP-203ENST00000554074 KIF3BO15066 747 aa10.43□□□□□ -0.74
SLIRP-203ENST00000554074 LTBP4Q8N2S1 1624 aa10.43□□□□□ -0.74
SLIRP-203ENST00000554074 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
SLIRP-203ENST00000554074 IQSEC2Q5JU85 1478 aa10.42□□□□□ -0.74
SLIRP-203ENST00000554074 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
SLIRP-203ENST00000554074 PTPN23Q9H3S7 1636 aa10.42□□□□□ -0.74
SLIRP-203ENST00000554074 PKD2Q13563 968 aa10.41□□□□□ -0.74
SLIRP-203ENST00000554074 DUOX2Q9NRD8 1548 aa10.41□□□□□ -0.74
SLIRP-203ENST00000554074 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
SLIRP-203ENST00000554074 MROH1Q8NDA8 1641 aa10.4□□□□□ -0.74
SLIRP-203ENST00000554074 CEP152O94986 1710 aa10.4□□□□□ -0.74
SLIRP-203ENST00000554074 TNRQ92752 1358 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 ABCC3O15438 1527 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 APLP2Q06481 763 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
SLIRP-203ENST00000554074 DEPDC5O75140 1603 aa10.38□□□□□ -0.75
SLIRP-203ENST00000554074 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-203ENST00000554074 ABCC5O15440 1437 aa10.37□□□□□ -0.75
SLIRP-203ENST00000554074 FGD6Q6ZV73 1430 aa10.37□□□□□ -0.75
SLIRP-203ENST00000554074 ERBINQ96RT1 1412 aa10.37□□□□□ -0.75
SLIRP-203ENST00000554074 DISP3Q9P2K9 1392 aa10.37□□□□□ -0.75
SLIRP-203ENST00000554074 NEURL4Q96JN8 1562 aa10.36□□□□□ -0.75
SLIRP-203ENST00000554074 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
SLIRP-203ENST00000554074 DAPK1P53355 1430 aa10.35□□□□□ -0.75
SLIRP-203ENST00000554074 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-203ENST00000554074 KIF15Q9NS87 1388 aa10.35□□□□□ -0.75
SLIRP-203ENST00000554074 UGGT1Q9NYU2 1555 aa10.35□□□□□ -0.75
SLIRP-203ENST00000554074 UBR1Q8IWV7 1749 aa10.34□□□□□ -0.75
SLIRP-203ENST00000554074 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
SLIRP-203ENST00000554074 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
SLIRP-203ENST00000554074 MED14O60244 1454 aa10.33□□□□□ -0.76
SLIRP-203ENST00000554074 IQGAP1P46940 1657 aa10.33□□□□□ -0.76
SLIRP-203ENST00000554074 KDM5AP29375 1690 aaKnown RBP10.32□□□□□ -0.76
SLIRP-203ENST00000554074 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
SLIRP-203ENST00000554074 THEMISQ8N1K5 641 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-203ENST00000554074 CPS1P31327 1500 aa10.32□□□□□ -0.76
SLIRP-203ENST00000554074 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-203ENST00000554074 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
SLIRP-203ENST00000554074 ANKRD30AQ9BXX3 1397 aa10.31□□□□□ -0.76
SLIRP-203ENST00000554074 SOCS7O14512 581 aa10.31□□□□□ -0.76
SLIRP-203ENST00000554074 LMTK2Q8IWU2 1503 aa10.31□□□□□ -0.76
SLIRP-203ENST00000554074 ANKLE2Q86XL3 938 aa10.3□□□□□ -0.76
SLIRP-203ENST00000554074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
SLIRP-203ENST00000554074 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
SLIRP-203ENST00000554074 KANK1Q14678 1352 aa10.28□□□□□ -0.76
SLIRP-203ENST00000554074 NPHP4O75161 1426 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-203ENST00000554074 SLIT1O75093 1534 aa10.28□□□□□ -0.76
SLIRP-203ENST00000554074 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
SLIRP-203ENST00000554074 PIK3C2BO00750 1634 aa10.27□□□□□ -0.77
SLIRP-203ENST00000554074 ARHGAP23Q9P227 1491 aa10.27□□□□□ -0.77
SLIRP-203ENST00000554074 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
SLIRP-203ENST00000554074 SYNMO15061 1565 aa10.26□□□□□ -0.77
SLIRP-203ENST00000554074 GCC2Q8IWJ2 1684 aa10.26□□□□□ -0.77
SLIRP-203ENST00000554074 TET3O43151 1660 aa10.25□□□□□ -0.77
SLIRP-203ENST00000554074 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
SLIRP-203ENST00000554074 RPRD2Q5VT52 1461 aaKnown RBP10.24□□□□□ -0.77
SLIRP-203ENST00000554074 UNC13BO14795 1591 aa10.24□□□□□ -0.77
SLIRP-203ENST00000554074 CHIC2Q9UKJ5 165 aa10.24□□□□□ -0.77
SLIRP-203ENST00000554074 NOS1P29475 1434 aa10.24□□□□□ -0.77
SLIRP-203ENST00000554074 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
SLIRP-203ENST00000554074 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
SLIRP-203ENST00000554074 XIRP1Q702N8 1843 aaKnown RBP10.22□□□□□ -0.77
SLIRP-203ENST00000554074 UBAP1LF5GYI3 381 aa10.22□□□□□ -0.77
SLIRP-203ENST00000554074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.771e-7■■■■□ 22.5
SLIRP-203ENST00000554074 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
SLIRP-203ENST00000554074 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.77
SLIRP-203ENST00000554074 ADGRB3O60242 1522 aa10.21□□□□□ -0.78
SLIRP-203ENST00000554074 IQGAP3Q86VI3 1631 aa10.21□□□□□ -0.78
SLIRP-203ENST00000554074 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
SLIRP-203ENST00000554074 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
SLIRP-203ENST00000554074 E9PCH4 1651 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 ALKQ9UM73 1620 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 TOM1O60784 492 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 LTKP29376 864 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
SLIRP-203ENST00000554074 IDI1Q13907 227 aa10.18□□□□□ -0.78
SLIRP-203ENST00000554074 TXNDC2Q86VQ3 553 aa10.18□□□□□ -0.78
SLIRP-203ENST00000554074 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
SLIRP-203ENST00000554074 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
SLIRP-203ENST00000554074 CHD2O14647 1828 aaKnown RBP10.16□□□□□ -0.78
SLIRP-203ENST00000554074 NWD1Q149M9 1564 aa10.15□□□□□ -0.78
SLIRP-203ENST00000554074 ZFYVE9O95405 1425 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms