RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
MTHFD1-205ENST00000554057 DNMT1P26358 1616 aaKnown RBP11.01□□□□□ -0.65
MTHFD1-205ENST00000554057 NEURL4Q96JN8 1562 aa10.99□□□□□ -0.65
MTHFD1-205ENST00000554057 POLR1AO95602 1720 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-205ENST00000554057 TNRQ92752 1358 aa10.99□□□□□ -0.65
MTHFD1-205ENST00000554057 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
MTHFD1-205ENST00000554057 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
MTHFD1-205ENST00000554057 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
MTHFD1-205ENST00000554057 KDM5DQ9BY66 1539 aa10.98□□□□□ -0.65
MTHFD1-205ENST00000554057 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
MTHFD1-205ENST00000554057 PZPP20742 1482 aa10.97□□□□□ -0.65
MTHFD1-205ENST00000554057 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
MTHFD1-205ENST00000554057 KIF3BO15066 747 aa10.96□□□□□ -0.65
MTHFD1-205ENST00000554057 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-205ENST00000554057 FAM135AQ9P2D6 1515 aa10.95□□□□□ -0.66
MTHFD1-205ENST00000554057 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
MTHFD1-205ENST00000554057 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-205ENST00000554057 CPS1P31327 1500 aa10.94□□□□□ -0.66
MTHFD1-205ENST00000554057 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
MTHFD1-205ENST00000554057 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-205ENST00000554057 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
MTHFD1-205ENST00000554057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.93□□□□□ -0.66
MTHFD1-205ENST00000554057 HSPA1LP34931 641 aa10.93□□□□□ -0.66
MTHFD1-205ENST00000554057 VWDEQ8N2E2 1590 aa10.93□□□□□ -0.66
MTHFD1-205ENST00000554057 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 UGGT1Q9NYU2 1555 aa10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 WASHC2CQ9Y4E1 1318 aa10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 NPHP4O75161 1426 aaPredicted RBP10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
MTHFD1-205ENST00000554057 DEPDC5O75140 1603 aa10.9□□□□□ -0.66
MTHFD1-205ENST00000554057 RNF17Q9BXT8 1623 aaKnown RBP10.9□□□□□ -0.66
MTHFD1-205ENST00000554057 ALKQ9UM73 1620 aa10.9□□□□□ -0.66
MTHFD1-205ENST00000554057 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
MTHFD1-205ENST00000554057 TOM1O60784 492 aa10.89□□□□□ -0.67
MTHFD1-205ENST00000554057 ANKLE2Q86XL3 938 aa10.89□□□□□ -0.67
MTHFD1-205ENST00000554057 ABCC3O15438 1527 aa10.89□□□□□ -0.67
MTHFD1-205ENST00000554057 MED14O60244 1454 aa10.88□□□□□ -0.67
MTHFD1-205ENST00000554057 THEMISQ8N1K5 641 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-205ENST00000554057 ZC3H13Q5T200 1668 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-205ENST00000554057 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
MTHFD1-205ENST00000554057 CROCC2H7BZ55 1655 aa10.87□□□□□ -0.67
MTHFD1-205ENST00000554057 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
MTHFD1-205ENST00000554057 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
MTHFD1-205ENST00000554057 CEP152O94986 1710 aa10.87□□□□□ -0.67
MTHFD1-205ENST00000554057 MAST1Q9Y2H9 1570 aa10.86□□□□□ -0.67
MTHFD1-205ENST00000554057 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
MTHFD1-205ENST00000554057 SENP3Q9H4L4 574 aaPredicted RBP10.86□□□□□ -0.67
MTHFD1-205ENST00000554057 SYNMO15061 1565 aa10.86□□□□□ -0.67
MTHFD1-205ENST00000554057 EIF2AK4Q9P2K8 1649 aaKnown RBP10.85□□□□□ -0.67
MTHFD1-205ENST00000554057 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
MTHFD1-205ENST00000554057 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
MTHFD1-205ENST00000554057 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
MTHFD1-205ENST00000554057 LRRC7Q96NW7 1537 aa10.84□□□□□ -0.67
MTHFD1-205ENST00000554057 CFAP65Q6ZU64 1925 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-205ENST00000554057 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-205ENST00000554057 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
MTHFD1-205ENST00000554057 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
MTHFD1-205ENST00000554057 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-205ENST00000554057 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
MTHFD1-205ENST00000554057 DUOX2Q9NRD8 1548 aa10.8□□□□□ -0.68
MTHFD1-205ENST00000554057 PRDM15P57071 1507 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-205ENST00000554057 KANK4Q5T7N3 995 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-205ENST00000554057 ARHGAP23Q9P227 1491 aa10.79□□□□□ -0.68
MTHFD1-205ENST00000554057 SLIT1O75093 1534 aa10.79□□□□□ -0.68
MTHFD1-205ENST00000554057 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-205ENST00000554057 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-205ENST00000554057 KIF15Q9NS87 1388 aa10.77□□□□□ -0.68
MTHFD1-205ENST00000554057 LTKP29376 864 aa10.77□□□□□ -0.69
MTHFD1-205ENST00000554057 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
MTHFD1-205ENST00000554057 MAP3K1Q13233 1512 aa10.76□□□□□ -0.69
MTHFD1-205ENST00000554057 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
MTHFD1-205ENST00000554057 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
MTHFD1-205ENST00000554057 ERBINQ96RT1 1412 aa10.75□□□□□ -0.69
MTHFD1-205ENST00000554057 ABCC5O15440 1437 aa10.75□□□□□ -0.69
MTHFD1-205ENST00000554057 PTPN23Q9H3S7 1636 aa10.74□□□□□ -0.69
MTHFD1-205ENST00000554057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
MTHFD1-205ENST00000554057 RRP7BPQ9NSQ0 103 aa10.73□□□□□ -0.69
MTHFD1-205ENST00000554057 TMEM2Q9UHN6 1383 aa10.73□□□□□ -0.69
MTHFD1-205ENST00000554057 DAPK1P53355 1430 aa10.73□□□□□ -0.69
MTHFD1-205ENST00000554057 EFCAB6Q5THR3 1501 aa10.73□□□□□ -0.69
MTHFD1-205ENST00000554057 EID1Q9Y6B2 187 aa10.72□□□□□ -0.69
MTHFD1-205ENST00000554057 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
MTHFD1-205ENST00000554057 KANK1Q14678 1352 aa10.71□□□□□ -0.69
MTHFD1-205ENST00000554057 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-205ENST00000554057 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-205ENST00000554057 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
MTHFD1-205ENST00000554057 ADGRB3O60242 1522 aa10.7□□□□□ -0.7
MTHFD1-205ENST00000554057 LMTK2Q8IWU2 1503 aa10.7□□□□□ -0.7
MTHFD1-205ENST00000554057 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-205ENST00000554057 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
MTHFD1-205ENST00000554057 FAM135BQ49AJ0 1406 aa10.69□□□□□ -0.7
MTHFD1-205ENST00000554057 FGD6Q6ZV73 1430 aa10.69□□□□□ -0.7
MTHFD1-205ENST00000554057 NWD1Q149M9 1564 aa10.69□□□□□ -0.7
MTHFD1-205ENST00000554057 IDI1Q13907 227 aa10.68□□□□□ -0.7
MTHFD1-205ENST00000554057 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-205ENST00000554057 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
MTHFD1-205ENST00000554057 CHIC2Q9UKJ5 165 aa10.68□□□□□ -0.7
MTHFD1-205ENST00000554057 TET3O43151 1660 aa10.68□□□□□ -0.7
MTHFD1-205ENST00000554057 NOS1P29475 1434 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms