RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 KIF13AQ9H1H9 1805 aa13.07□□□□□ -0.32
RDH11-206ENST00000554035 PZPP20742 1482 aa13.07□□□□□ -0.32
RDH11-206ENST00000554035 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
RDH11-206ENST00000554035 UNC13BO14795 1591 aa13.06□□□□□ -0.32
RDH11-206ENST00000554035 KIDINS220Q9ULH0 1771 aa13.05□□□□□ -0.32
RDH11-206ENST00000554035 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
RDH11-206ENST00000554035 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
RDH11-206ENST00000554035 TIMELESSQ9UNS1 1208 aa13.04□□□□□ -0.32
RDH11-206ENST00000554035 RICTORQ6R327 1708 aa13.04□□□□□ -0.32
RDH11-206ENST00000554035 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
RDH11-206ENST00000554035 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
RDH11-206ENST00000554035 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.32
RDH11-206ENST00000554035 NUP155O75694 1391 aa13.02□□□□□ -0.33
RDH11-206ENST00000554035 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.33
RDH11-206ENST00000554035 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
RDH11-206ENST00000554035 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
RDH11-206ENST00000554035 DEPDC5O75140 1603 aa13□□□□□ -0.33
RDH11-206ENST00000554035 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
RDH11-206ENST00000554035 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
RDH11-206ENST00000554035 A2MP01023 1474 aa12.99□□□□□ -0.33
RDH11-206ENST00000554035 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
RDH11-206ENST00000554035 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
RDH11-206ENST00000554035 TSPOAP1O95153 1857 aa12.99□□□□□ -0.33
RDH11-206ENST00000554035 BCORL1Q5H9F3 1711 aa12.99□□□□□ -0.33
RDH11-206ENST00000554035 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
RDH11-206ENST00000554035 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
RDH11-206ENST00000554035 VWDEQ8N2E2 1590 aa12.96□□□□□ -0.33
RDH11-206ENST00000554035 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
RDH11-206ENST00000554035 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
RDH11-206ENST00000554035 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.33
RDH11-206ENST00000554035 RNF17Q9BXT8 1623 aaKnown RBP12.95□□□□□ -0.34
RDH11-206ENST00000554035 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
RDH11-206ENST00000554035 PKD2Q13563 968 aa12.95□□□□□ -0.34
RDH11-206ENST00000554035 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
RDH11-206ENST00000554035 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
RDH11-206ENST00000554035 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
RDH11-206ENST00000554035 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
RDH11-206ENST00000554035 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
RDH11-206ENST00000554035 KIF3BO15066 747 aa12.92□□□□□ -0.34
RDH11-206ENST00000554035 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
RDH11-206ENST00000554035 KANK1Q14678 1352 aa12.92□□□□□ -0.34
RDH11-206ENST00000554035 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
RDH11-206ENST00000554035 YEATS2Q9ULM3 1422 aa12.91□□□□□ -0.34
RDH11-206ENST00000554035 TONSLQ96HA7 1378 aa12.91□□□□□ -0.34
RDH11-206ENST00000554035 ATP10AO60312 1499 aa12.91□□□□□ -0.34
RDH11-206ENST00000554035 TET3O43151 1660 aa12.9□□□□□ -0.34
RDH11-206ENST00000554035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
RDH11-206ENST00000554035 AGLP35573 1532 aa12.88□□□□□ -0.35
RDH11-206ENST00000554035 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
RDH11-206ENST00000554035 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
RDH11-206ENST00000554035 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
RDH11-206ENST00000554035 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
RDH11-206ENST00000554035 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
RDH11-206ENST00000554035 PTPRTO14522 1441 aa12.86□□□□□ -0.35
RDH11-206ENST00000554035 E9PCH4 1651 aa12.86□□□□□ -0.35
RDH11-206ENST00000554035 ZC3H13Q5T200 1668 aaKnown RBP12.84□□□□□ -0.35
RDH11-206ENST00000554035 ABCC3O15438 1527 aa12.83□□□□□ -0.35
RDH11-206ENST00000554035 TRPM2O94759 1503 aa12.83□□□□□ -0.35
RDH11-206ENST00000554035 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
RDH11-206ENST00000554035 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
RDH11-206ENST00000554035 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
RDH11-206ENST00000554035 CEP152O94986 1710 aa12.82□□□□□ -0.36
RDH11-206ENST00000554035 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
RDH11-206ENST00000554035 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
RDH11-206ENST00000554035 GGT6Q6P531 493 aa12.8□□□□□ -0.36
RDH11-206ENST00000554035 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
RDH11-206ENST00000554035 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
RDH11-206ENST00000554035 WASHC2CQ9Y4E1 1318 aa12.79□□□□□ -0.36
RDH11-206ENST00000554035 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
RDH11-206ENST00000554035 NPATQ14207 1427 aa12.78□□□□□ -0.36
RDH11-206ENST00000554035 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.37
RDH11-206ENST00000554035 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
RDH11-206ENST00000554035 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
RDH11-206ENST00000554035 CNTLNQ9NXG0 1405 aa12.76□□□□□ -0.37
RDH11-206ENST00000554035 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
RDH11-206ENST00000554035 NOS1P29475 1434 aa12.75□□□□□ -0.37
RDH11-206ENST00000554035 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
RDH11-206ENST00000554035 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
RDH11-206ENST00000554035 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
RDH11-206ENST00000554035 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
RDH11-206ENST00000554035 ADGRB3O60242 1522 aa12.69□□□□□ -0.38
RDH11-206ENST00000554035 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
RDH11-206ENST00000554035 CLTCQ00610 1675 aaKnown RBP12.69□□□□□ -0.38
RDH11-206ENST00000554035 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
RDH11-206ENST00000554035 KIF1BO60333 1816 aa12.69□□□□□ -0.38
RDH11-206ENST00000554035 SYNMO15061 1565 aa12.69□□□□□ -0.38
RDH11-206ENST00000554035 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
RDH11-206ENST00000554035 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
RDH11-206ENST00000554035 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
RDH11-206ENST00000554035 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
RDH11-206ENST00000554035 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
RDH11-206ENST00000554035 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
RDH11-206ENST00000554035 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
RDH11-206ENST00000554035 MYOM2P54296 1465 aa12.65□□□□□ -0.38
RDH11-206ENST00000554035 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
RDH11-206ENST00000554035 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
RDH11-206ENST00000554035 TRPM1Q7Z4N2 1603 aa12.64□□□□□ -0.39
RDH11-206ENST00000554035 EIF4G2P78344 907 aaKnown RBP eCLIP12.64□□□□□ -0.39
RDH11-206ENST00000554035 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
RDH11-206ENST00000554035 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms