RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
TMEM55B-205ENST00000554028 KIF3BO15066 747 aa15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 NUP155O75694 1391 aa15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 A2MP01023 1474 aa15.32■□□□□ 0.04
TMEM55B-205ENST00000554028 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
TMEM55B-205ENST00000554028 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
TMEM55B-205ENST00000554028 KANK1Q14678 1352 aa15.3■□□□□ 0.04
TMEM55B-205ENST00000554028 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
TMEM55B-205ENST00000554028 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
TMEM55B-205ENST00000554028 KDM6BO15054 1643 aa15.28■□□□□ 0.04
TMEM55B-205ENST00000554028 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
TMEM55B-205ENST00000554028 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
TMEM55B-205ENST00000554028 ATP10AO60312 1499 aa15.27■□□□□ 0.04
TMEM55B-205ENST00000554028 YEATS2Q9ULM3 1422 aa15.26■□□□□ 0.03
TMEM55B-205ENST00000554028 GGT6Q6P531 493 aa15.25■□□□□ 0.03
TMEM55B-205ENST00000554028 DIP2CQ9Y2E4 1556 aa15.24■□□□□ 0.03
TMEM55B-205ENST00000554028 PKD2Q13563 968 aa15.23■□□□□ 0.03
TMEM55B-205ENST00000554028 ABCA6Q8N139 1617 aa15.23■□□□□ 0.03
TMEM55B-205ENST00000554028 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
TMEM55B-205ENST00000554028 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
TMEM55B-205ENST00000554028 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
TMEM55B-205ENST00000554028 PZPP20742 1482 aa15.2■□□□□ 0.02
TMEM55B-205ENST00000554028 UNC13BO14795 1591 aa15.19■□□□□ 0.02
TMEM55B-205ENST00000554028 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
TMEM55B-205ENST00000554028 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
TMEM55B-205ENST00000554028 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
TMEM55B-205ENST00000554028 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
TMEM55B-205ENST00000554028 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
TMEM55B-205ENST00000554028 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
TMEM55B-205ENST00000554028 AGLP35573 1532 aa15.17■□□□□ 0.02
TMEM55B-205ENST00000554028 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
TMEM55B-205ENST00000554028 IQGAP3Q86VI3 1631 aa15.14■□□□□ 0.01
TMEM55B-205ENST00000554028 MLECQ14165 292 aa15.14■□□□□ 0.01
TMEM55B-205ENST00000554028 SIN3AQ96ST3 1273 aa15.14■□□□□ 0.01
TMEM55B-205ENST00000554028 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
TMEM55B-205ENST00000554028 PRDM15P57071 1507 aaPredicted RBP15.13■□□□□ 0.01
TMEM55B-205ENST00000554028 BCORL1Q5H9F3 1711 aa15.13■□□□□ 0.01
TMEM55B-205ENST00000554028 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
TMEM55B-205ENST00000554028 ANKRD30BQ9BXX2 1392 aa15.12■□□□□ 0.01
TMEM55B-205ENST00000554028 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
TMEM55B-205ENST00000554028 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
TMEM55B-205ENST00000554028 TONSLQ96HA7 1378 aa15.1■□□□□ 0.01
TMEM55B-205ENST00000554028 LMTK2Q8IWU2 1503 aa15.09■□□□□ 0.01
TMEM55B-205ENST00000554028 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
TMEM55B-205ENST00000554028 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
TMEM55B-205ENST00000554028 ABCC3O15438 1527 aa15.07■□□□□ 0
TMEM55B-205ENST00000554028 TET3O43151 1660 aa15.06■□□□□ 0
TMEM55B-205ENST00000554028 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
TMEM55B-205ENST00000554028 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
TMEM55B-205ENST00000554028 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
TMEM55B-205ENST00000554028 EFCAB6Q5THR3 1501 aa15.03■□□□□ -0
TMEM55B-205ENST00000554028 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
TMEM55B-205ENST00000554028 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
TMEM55B-205ENST00000554028 PTPRTO14522 1441 aa15.02■□□□□ -0
TMEM55B-205ENST00000554028 NPATQ14207 1427 aa15.01□□□□□ -0.01
TMEM55B-205ENST00000554028 E9PCH4 1651 aa15□□□□□ -0.01
TMEM55B-205ENST00000554028 ZMYM3Q14202 1370 aa14.99□□□□□ -0.01
TMEM55B-205ENST00000554028 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
TMEM55B-205ENST00000554028 CEP152O94986 1710 aa14.99□□□□□ -0.01
TMEM55B-205ENST00000554028 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
TMEM55B-205ENST00000554028 PPP1R15AO75807 674 aaPredicted RBP14.98□□□□□ -0.01
TMEM55B-205ENST00000554028 L3MBTL2Q969R5 705 aa14.98□□□□□ -0.01
TMEM55B-205ENST00000554028 CAMSAP1Q5T5Y3 1602 aa14.98□□□□□ -0.01
TMEM55B-205ENST00000554028 TRPM2O94759 1503 aa14.97□□□□□ -0.01
TMEM55B-205ENST00000554028 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
TMEM55B-205ENST00000554028 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
TMEM55B-205ENST00000554028 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.01
TMEM55B-205ENST00000554028 NOS1P29475 1434 aa14.95□□□□□ -0.02
TMEM55B-205ENST00000554028 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
TMEM55B-205ENST00000554028 STAC3Q96MF2 364 aa14.95□□□□□ -0.02
TMEM55B-205ENST00000554028 CLTCQ00610 1675 aaKnown RBP14.94□□□□□ -0.02
TMEM55B-205ENST00000554028 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
TMEM55B-205ENST00000554028 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
TMEM55B-205ENST00000554028 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
TMEM55B-205ENST00000554028 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
TMEM55B-205ENST00000554028 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
TMEM55B-205ENST00000554028 ERVK-7P63135 1459 aa14.92□□□□□ -0.02
TMEM55B-205ENST00000554028 IDI1Q13907 227 aa14.91□□□□□ -0.02
TMEM55B-205ENST00000554028 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
TMEM55B-205ENST00000554028 TNRQ92752 1358 aa14.89□□□□□ -0.03
TMEM55B-205ENST00000554028 CEBPAP49715 358 aaPredicted RBP14.89□□□□□ -0.03
TMEM55B-205ENST00000554028 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
TMEM55B-205ENST00000554028 MROH2AA6NES4 1674 aa14.88□□□□□ -0.03
TMEM55B-205ENST00000554028 SPATA31E1Q6ZUB1 1445 aa14.88□□□□□ -0.03
TMEM55B-205ENST00000554028 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
TMEM55B-205ENST00000554028 PREX1Q8TCU6 1659 aa14.87□□□□□ -0.03
TMEM55B-205ENST00000554028 SPATA31D1Q6ZQQ2 1576 aa14.86□□□□□ -0.03
TMEM55B-205ENST00000554028 HDGFP51858 240 aaKnown RBP14.86□□□□□ -0.03
TMEM55B-205ENST00000554028 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
TMEM55B-205ENST00000554028 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
TMEM55B-205ENST00000554028 FER1L4A9Z1Z3 1794 aa14.85□□□□□ -0.03
TMEM55B-205ENST00000554028 SYNMO15061 1565 aa14.85□□□□□ -0.03
TMEM55B-205ENST00000554028 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
TMEM55B-205ENST00000554028 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
TMEM55B-205ENST00000554028 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
TMEM55B-205ENST00000554028 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
TMEM55B-205ENST00000554028 MADDQ8WXG6 1647 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms