RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 NCOA1Q15788 1441 aa35.58■■■■□ 3.29
NEK9-203ENST00000553945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.58■■■■□ 3.29
NEK9-203ENST00000553945 ITGAEP38570 1179 aa35.56■■■■□ 3.28
NEK9-203ENST00000553945 RNF17Q9BXT8 1623 aaKnown RBP35.56■■■■□ 3.28
NEK9-203ENST00000553945 PTPRKQ15262 1439 aa35.56■■■■□ 3.28
NEK9-203ENST00000553945 ZMYM3Q14202 1370 aa35.55■■■■□ 3.28
NEK9-203ENST00000553945 ERBINQ96RT1 1412 aa35.55■■■■□ 3.28
NEK9-203ENST00000553945 RRBP1Q9P2E9 1410 aaKnown RBP35.55■■■■□ 3.28
NEK9-203ENST00000553945 KDM5DQ9BY66 1539 aa35.51■■■■□ 3.27
NEK9-203ENST00000553945 WASHC2CQ9Y4E1 1318 aa35.51■■■■□ 3.27
NEK9-203ENST00000553945 FAM135AQ9P2D6 1515 aa35.49■■■■□ 3.27
NEK9-203ENST00000553945 LMTK3Q96Q04 1460 aa35.47■■■■□ 3.27
NEK9-203ENST00000553945 MROH1Q8NDA8 1641 aa35.46■■■■□ 3.27
NEK9-203ENST00000553945 PREX1Q8TCU6 1659 aa35.46■■■■□ 3.27
NEK9-203ENST00000553945 ROCK1Q13464 1354 aa35.42■■■■□ 3.26
NEK9-203ENST00000553945 ZC3H13Q5T200 1668 aaKnown RBP35.4■■■■□ 3.26
NEK9-203ENST00000553945 SETD1BQ9UPS6 1966 aaKnown RBP35.4■■■■□ 3.26
NEK9-203ENST00000553945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.4■■■■□ 3.262e-9■■□□□ 11.8
NEK9-203ENST00000553945 ABCC3O15438 1527 aa35.4■■■■□ 3.26
NEK9-203ENST00000553945 NPATQ14207 1427 aa35.4■■■■□ 3.26
NEK9-203ENST00000553945 ANKRD50Q9ULJ7 1429 aa35.39■■■■□ 3.26
NEK9-203ENST00000553945 DEPDC5O75140 1603 aa35.39■■■■□ 3.26
NEK9-203ENST00000553945 PRDM15P57071 1507 aaPredicted RBP35.38■■■■□ 3.25
NEK9-203ENST00000553945 UHRF1BP1Q6BDS2 1440 aa35.38■■■■□ 3.25
NEK9-203ENST00000553945 CEP152O94986 1710 aa35.37■■■■□ 3.25
NEK9-203ENST00000553945 HSPA2P54652 639 aa35.33■■■■□ 3.25
NEK9-203ENST00000553945 PZPP20742 1482 aa35.33■■■■□ 3.25
NEK9-203ENST00000553945 KANK1Q14678 1352 aa35.32■■■■□ 3.24
NEK9-203ENST00000553945 CAMSAP1Q5T5Y3 1602 aa35.29■■■■□ 3.24
NEK9-203ENST00000553945 FBXO31Q5XUX0 539 aaPredicted RBP35.29■■■■□ 3.24
NEK9-203ENST00000553945 MYO3AQ8NEV4 1616 aa35.24■■■■□ 3.23
NEK9-203ENST00000553945 VWDEQ8N2E2 1590 aa35.22■■■■□ 3.23
NEK9-203ENST00000553945 TNRQ92752 1358 aa35.22■■■■□ 3.23
NEK9-203ENST00000553945 UNC13BO14795 1591 aa35.18■■■■□ 3.22
NEK9-203ENST00000553945 LMTK2Q8IWU2 1503 aa35.17■■■■□ 3.22
NEK9-203ENST00000553945 ZNF142P52746 1687 aaPredicted RBP35.16■■■■□ 3.22
NEK9-203ENST00000553945 CFAP65Q6ZU64 1925 aaKnown RBP35.16■■■■□ 3.22
NEK9-203ENST00000553945 ARHGAP31Q2M1Z3 1444 aa35.15■■■■□ 3.22
NEK9-203ENST00000553945 CEP170BQ9Y4F5 1589 aaPredicted RBP35.15■■■■□ 3.22
NEK9-203ENST00000553945 ERVK-7P63135 1459 aa35.15■■■■□ 3.22
NEK9-203ENST00000553945 SPATA31D1Q6ZQQ2 1576 aa35.13■■■■□ 3.21
NEK9-203ENST00000553945 GCC2Q8IWJ2 1684 aa35.13■■■■□ 3.21
NEK9-203ENST00000553945 NAIPQ13075 1403 aa35.12■■■■□ 3.21
NEK9-203ENST00000553945 EFCAB6Q5THR3 1501 aa35.1■■■■□ 3.21
NEK9-203ENST00000553945 A2ML1A8K2U0 1454 aa35.09■■■■□ 3.21
NEK9-203ENST00000553945 HFM1A2PYH4 1435 aa35.06■■■■□ 3.2
NEK9-203ENST00000553945 TET3O43151 1660 aa35.05■■■■□ 3.2
NEK9-203ENST00000553945 NLRP1Q9C000 1473 aa35.05■■■■□ 3.2
NEK9-203ENST00000553945 NUP155O75694 1391 aa35.05■■■■□ 3.2
NEK9-203ENST00000553945 IQGAP3Q86VI3 1631 aa35.04■■■■□ 3.2
NEK9-203ENST00000553945 STRCQ7RTU9 1775 aa35.04■■■■□ 3.2
NEK9-203ENST00000553945 RPRD2Q5VT52 1461 aaKnown RBP34.97■■■■□ 3.19
NEK9-203ENST00000553945 UGGT1Q9NYU2 1555 aa34.96■■■■□ 3.19
NEK9-203ENST00000553945 PLA2R1Q13018 1463 aa34.93■■■■□ 3.18
NEK9-203ENST00000553945 E9PCH4 1651 aa34.92■■■■□ 3.18
NEK9-203ENST00000553945 NOS1P29475 1434 aa34.92■■■■□ 3.18
NEK9-203ENST00000553945 SYNMO15061 1565 aa34.91■■■■□ 3.18
NEK9-203ENST00000553945 THEMISQ8N1K5 641 aaPredicted RBP34.91■■■■□ 3.18
NEK9-203ENST00000553945 DMRT2Q9Y5R5 561 aa34.91■■■■□ 3.18
NEK9-203ENST00000553945 NCKAP5LQ9HCH0 1330 aa34.9■■■■□ 3.18
NEK9-203ENST00000553945 TRIM52Q96A61 297 aa34.89■■■■□ 3.18
NEK9-203ENST00000553945 UBR1Q8IWV7 1749 aa34.87■■■■□ 3.17
NEK9-203ENST00000553945 PIK3C2BO00750 1634 aa34.86■■■■□ 3.17
NEK9-203ENST00000553945 PKD2Q13563 968 aa34.85■■■■□ 3.17
NEK9-203ENST00000553945 PTPRTO14522 1441 aa34.83■■■■□ 3.17
NEK9-203ENST00000553945 IDI1Q13907 227 aa34.83■■■■□ 3.17
NEK9-203ENST00000553945 STAG3Q9UJ98 1225 aa34.81■■■■□ 3.16
NEK9-203ENST00000553945 POLR1AO95602 1720 aaPredicted RBP34.81■■■■□ 3.16
NEK9-203ENST00000553945 SLC52A1Q9NWF4 448 aa34.8■■■■□ 3.16
NEK9-203ENST00000553945 ANKLE2Q86XL3 938 aa34.78■■■■□ 3.16
NEK9-203ENST00000553945 SETD5Q9C0A6 1442 aa34.78■■■■□ 3.16
NEK9-203ENST00000553945 KDM5AP29375 1690 aaKnown RBP34.75■■■■□ 3.15
NEK9-203ENST00000553945 ADGRB3O60242 1522 aa34.73■■■■□ 3.15
NEK9-203ENST00000553945 NEURL4Q96JN8 1562 aa34.72■■■■□ 3.15
NEK9-203ENST00000553945 SLC4A1APQ9BWU0 796 aaKnown RBP34.72■■■■□ 3.15
NEK9-203ENST00000553945 SPHKAPQ2M3C7 1700 aa34.72■■■■□ 3.15
NEK9-203ENST00000553945 SLIT1O75093 1534 aa34.68■■■■□ 3.14
NEK9-203ENST00000553945 ARHGAP23Q9P227 1491 aa34.67■■■■□ 3.14
NEK9-203ENST00000553945 RAB3GAP2Q9H2M9 1393 aa34.66■■■■□ 3.14
NEK9-203ENST00000553945 TMEM2Q9UHN6 1383 aa34.65■■■■□ 3.14
NEK9-203ENST00000553945 CHGAP10645 457 aaKnown RBP34.65■■■■□ 3.14
NEK9-203ENST00000553945 MYO5BQ9ULV0 1848 aa34.65■■■■□ 3.14
NEK9-203ENST00000553945 TXNDC2Q86VQ3 553 aa34.64■■■■□ 3.14
NEK9-203ENST00000553945 SCAF11Q99590 1463 aaKnown RBP34.64■■■■□ 3.14
NEK9-203ENST00000553945 NPHP4O75161 1426 aaPredicted RBP34.64■■■■□ 3.14
NEK9-203ENST00000553945 TMEM131LA2VDJ0 1609 aa34.63■■■■□ 3.13
NEK9-203ENST00000553945 EID1Q9Y6B2 187 aa34.63■■■■□ 3.13
NEK9-203ENST00000553945 MED14O60244 1454 aa34.63■■■■□ 3.13
NEK9-203ENST00000553945 ACIN1Q9UKV3 1341 aaKnown RBP34.62■■■■□ 3.13
NEK9-203ENST00000553945 LTKP29376 864 aa34.61■■■■□ 3.13
NEK9-203ENST00000553945 IQGAP1P46940 1657 aa34.6■■■■□ 3.13
NEK9-203ENST00000553945 MPHOSPH9Q99550 1183 aa34.59■■■■□ 3.13
NEK9-203ENST00000553945 TRPM2O94759 1503 aa34.59■■■■□ 3.13
NEK9-203ENST00000553945 CLTCL1P53675 1640 aa34.55■■■■□ 3.12
NEK9-203ENST00000553945 FOXD1Q16676 465 aa34.54■■■■□ 3.12
NEK9-203ENST00000553945 ZNF335Q9H4Z2 1342 aaPredicted RBP34.53■■■■□ 3.12
NEK9-203ENST00000553945 RIMS2Q9UQ26 1411 aa34.5■■■■□ 3.11
NEK9-203ENST00000553945 CERKQ8TCT0 537 aa34.5■■■■□ 3.11
NEK9-203ENST00000553945 LTBP4Q8N2S1 1624 aa34.49■■■■□ 3.11
NEK9-203ENST00000553945 ZFYVE9O95405 1425 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms