RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 RRP7BPQ9NSQ0 103 aa31.32■■■□□ 2.6
PRAF2-202ENST00000553851 SHANK2Q9UPX8 1470 aa31.32■■■□□ 2.6
PRAF2-202ENST00000553851 STRCQ7RTU9 1775 aa31.31■■■□□ 2.6
PRAF2-202ENST00000553851 FAM135AQ9P2D6 1515 aa31.3■■■□□ 2.6
PRAF2-202ENST00000553851 DUOX2Q9NRD8 1548 aa31.3■■■□□ 2.6
PRAF2-202ENST00000553851 FBXO31Q5XUX0 539 aaPredicted RBP31.29■■■□□ 2.6
PRAF2-202ENST00000553851 KIF15Q9NS87 1388 aa31.29■■■□□ 2.6
PRAF2-202ENST00000553851 CHIC2Q9UKJ5 165 aa31.28■■■□□ 2.6
PRAF2-202ENST00000553851 DNMT1P26358 1616 aaKnown RBP31.28■■■□□ 2.6
PRAF2-202ENST00000553851 CROCC2H7BZ55 1655 aa31.28■■■□□ 2.6
PRAF2-202ENST00000553851 FAM50AQ14320 339 aaKnown RBP31.27■■■□□ 2.6
PRAF2-202ENST00000553851 RNF17Q9BXT8 1623 aaKnown RBP31.26■■■□□ 2.59
PRAF2-202ENST00000553851 EIF2AK4Q9P2K8 1649 aaKnown RBP31.25■■■□□ 2.59
PRAF2-202ENST00000553851 PZPP20742 1482 aa31.24■■■□□ 2.59
PRAF2-202ENST00000553851 NCOA1Q15788 1441 aa31.24■■■□□ 2.59
PRAF2-202ENST00000553851 MYO3AQ8NEV4 1616 aa31.23■■■□□ 2.59
PRAF2-202ENST00000553851 CAMSAP1Q5T5Y3 1602 aa31.22■■■□□ 2.59
PRAF2-202ENST00000553851 TNRQ92752 1358 aa31.21■■■□□ 2.59
PRAF2-202ENST00000553851 ANKRD30AQ9BXX3 1397 aa31.21■■■□□ 2.59
PRAF2-202ENST00000553851 CEP170BQ9Y4F5 1589 aaPredicted RBP31.2■■■□□ 2.58
PRAF2-202ENST00000553851 FBXO41Q8TF61 875 aa31.2■■■□□ 2.58
PRAF2-202ENST00000553851 PTPRTO14522 1441 aa31.19■■■□□ 2.58
PRAF2-202ENST00000553851 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
PRAF2-202ENST00000553851 ABCC3O15438 1527 aa31.18■■■□□ 2.58
PRAF2-202ENST00000553851 ZNF142P52746 1687 aaPredicted RBP31.18■■■□□ 2.58
PRAF2-202ENST00000553851 PPARGC1BQ86YN6 1023 aaKnown RBP31.17■■■□□ 2.58
PRAF2-202ENST00000553851 NCKAP5LQ9HCH0 1330 aa31.17■■■□□ 2.58
PRAF2-202ENST00000553851 MROH1Q8NDA8 1641 aa31.17■■■□□ 2.58
PRAF2-202ENST00000553851 A2ML1A8K2U0 1454 aa31.16■■■□□ 2.58
PRAF2-202ENST00000553851 CERKQ8TCT0 537 aa31.15■■■□□ 2.58
PRAF2-202ENST00000553851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.14■■■□□ 2.58
PRAF2-202ENST00000553851 ZC3H13Q5T200 1668 aaKnown RBP31.13■■■□□ 2.57
PRAF2-202ENST00000553851 PKD2Q13563 968 aa31.11■■■□□ 2.57
PRAF2-202ENST00000553851 PLA2R1Q13018 1463 aa31.1■■■□□ 2.57
PRAF2-202ENST00000553851 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
PRAF2-202ENST00000553851 CEP152O94986 1710 aa31.07■■■□□ 2.56
PRAF2-202ENST00000553851 PRDM15P57071 1507 aaPredicted RBP31.06■■■□□ 2.56
PRAF2-202ENST00000553851 KANK1Q14678 1352 aa31.05■■■□□ 2.56
PRAF2-202ENST00000553851 NLRP1Q9C000 1473 aa31.05■■■□□ 2.56
PRAF2-202ENST00000553851 ERVK-7P63135 1459 aa31.03■■■□□ 2.56
PRAF2-202ENST00000553851 THEMISQ8N1K5 641 aaPredicted RBP31.02■■■□□ 2.56
PRAF2-202ENST00000553851 SPATA31D1Q6ZQQ2 1576 aa31.02■■■□□ 2.56
PRAF2-202ENST00000553851 DEPDC5O75140 1603 aa31.02■■■□□ 2.56
PRAF2-202ENST00000553851 CFAP65Q6ZU64 1925 aaKnown RBP31■■■□□ 2.55
PRAF2-202ENST00000553851 ARHGAP31Q2M1Z3 1444 aa31■■■□□ 2.55
PRAF2-202ENST00000553851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.98■■■□□ 2.55
PRAF2-202ENST00000553851 UGGT1Q9NYU2 1555 aa30.97■■■□□ 2.55
PRAF2-202ENST00000553851 ANKRD50Q9ULJ7 1429 aa30.97■■■□□ 2.55
PRAF2-202ENST00000553851 ITGAEP38570 1179 aa30.95■■■□□ 2.54
PRAF2-202ENST00000553851 ANKLE2Q86XL3 938 aa30.95■■■□□ 2.54
PRAF2-202ENST00000553851 VWDEQ8N2E2 1590 aa30.92■■■□□ 2.54
PRAF2-202ENST00000553851 LTBP4Q8N2S1 1624 aa30.92■■■□□ 2.54
PRAF2-202ENST00000553851 LMTK2Q8IWU2 1503 aa30.91■■■□□ 2.54
PRAF2-202ENST00000553851 ZNF335Q9H4Z2 1342 aaPredicted RBP30.91■■■□□ 2.54
PRAF2-202ENST00000553851 ROCK1Q13464 1354 aa30.9■■■□□ 2.54
PRAF2-202ENST00000553851 POLR1AO95602 1720 aaPredicted RBP30.85■■■□□ 2.53
PRAF2-202ENST00000553851 NEURL4Q96JN8 1562 aa30.85■■■□□ 2.53
PRAF2-202ENST00000553851 EFCAB6Q5THR3 1501 aa30.8■■■□□ 2.52
PRAF2-202ENST00000553851 UBR1Q8IWV7 1749 aa30.79■■■□□ 2.52
PRAF2-202ENST00000553851 NPHP4O75161 1426 aaPredicted RBP30.79■■■□□ 2.52
PRAF2-202ENST00000553851 MED14O60244 1454 aa30.78■■■□□ 2.52
PRAF2-202ENST00000553851 IDI1Q13907 227 aa30.78■■■□□ 2.52
PRAF2-202ENST00000553851 STAG3Q9UJ98 1225 aa30.77■■■□□ 2.52
PRAF2-202ENST00000553851 RRBP1Q9P2E9 1410 aaKnown RBP30.77■■■□□ 2.52
PRAF2-202ENST00000553851 NOS1P29475 1434 aa30.75■■■□□ 2.51
PRAF2-202ENST00000553851 IQSEC2Q5JU85 1478 aa30.75■■■□□ 2.51
PRAF2-202ENST00000553851 UNC13BO14795 1591 aa30.73■■■□□ 2.51
PRAF2-202ENST00000553851 TXNDC2Q86VQ3 553 aa30.73■■■□□ 2.51
PRAF2-202ENST00000553851 PIK3C2BO00750 1634 aa30.72■■■□□ 2.51
PRAF2-202ENST00000553851 LTKP29376 864 aa30.72■■■□□ 2.51
PRAF2-202ENST00000553851 SYNMO15061 1565 aa30.72■■■□□ 2.51
PRAF2-202ENST00000553851 RPRD2Q5VT52 1461 aaKnown RBP30.71■■■□□ 2.51
PRAF2-202ENST00000553851 SLC52A1Q9NWF4 448 aa30.71■■■□□ 2.51
PRAF2-202ENST00000553851 EID1Q9Y6B2 187 aa30.7■■■□□ 2.5
PRAF2-202ENST00000553851 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
PRAF2-202ENST00000553851 ARHGAP23Q9P227 1491 aa30.69■■■□□ 2.5
PRAF2-202ENST00000553851 SLIT1O75093 1534 aa30.69■■■□□ 2.5
PRAF2-202ENST00000553851 TET3O43151 1660 aa30.69■■■□□ 2.5
PRAF2-202ENST00000553851 NUP155O75694 1391 aa30.69■■■□□ 2.5
PRAF2-202ENST00000553851 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
PRAF2-202ENST00000553851 TMEM2Q9UHN6 1383 aa30.67■■■□□ 2.5
PRAF2-202ENST00000553851 GCC2Q8IWJ2 1684 aa30.63■■■□□ 2.49
PRAF2-202ENST00000553851 CPS1P31327 1500 aa30.62■■■□□ 2.49
PRAF2-202ENST00000553851 IQGAP3Q86VI3 1631 aa30.62■■■□□ 2.49
PRAF2-202ENST00000553851 KDM5AP29375 1690 aaKnown RBP30.61■■■□□ 2.49
PRAF2-202ENST00000553851 UBAP1LF5GYI3 381 aa30.61■■■□□ 2.49
PRAF2-202ENST00000553851 ADGRB3O60242 1522 aa30.58■■■□□ 2.49
PRAF2-202ENST00000553851 E9PCH4 1651 aa30.57■■■□□ 2.48
PRAF2-202ENST00000553851 NAIPQ13075 1403 aa30.55■■■□□ 2.48
PRAF2-202ENST00000553851 CHGAP10645 457 aaKnown RBP30.52■■■□□ 2.48
PRAF2-202ENST00000553851 STRCP1A6NGW2 1772 aa30.48■■■□□ 2.47
PRAF2-202ENST00000553851 HDGFP51858 240 aaKnown RBP30.47■■■□□ 2.47
PRAF2-202ENST00000553851 SLC26A8Q96RN1 970 aa30.47■■■□□ 2.47
PRAF2-202ENST00000553851 HFM1A2PYH4 1435 aa30.46■■■□□ 2.47
PRAF2-202ENST00000553851 TMEM131LA2VDJ0 1609 aa30.46■■■□□ 2.47
PRAF2-202ENST00000553851 TOM1O60784 492 aa30.46■■■□□ 2.47
PRAF2-202ENST00000553851 BCANQ96GW7 911 aa30.46■■■□□ 2.47
PRAF2-202ENST00000553851 RIMS2Q9UQ26 1411 aa30.44■■■□□ 2.46
PRAF2-202ENST00000553851 LRRC7Q96NW7 1537 aa30.44■■■□□ 2.46
PRAF2-202ENST00000553851 MYO5BQ9ULV0 1848 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms