RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 TIAM1Q13009 1591 aa15.07■□□□□ 0
PRKCH-208ENST00000553846 STRCP1A6NGW2 1772 aa15.07■□□□□ 0
PRKCH-208ENST00000553846 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
PRKCH-208ENST00000553846 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
PRKCH-208ENST00000553846 KDM5DQ9BY66 1539 aa15.05■□□□□ -0
PRKCH-208ENST00000553846 TNRQ92752 1358 aa15.04■□□□□ -0
PRKCH-208ENST00000553846 GGT6Q6P531 493 aa15.04■□□□□ -0
PRKCH-208ENST00000553846 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
PRKCH-208ENST00000553846 TOM1O60784 492 aa15.02■□□□□ -0
PRKCH-208ENST00000553846 SYNMO15061 1565 aa15.02□□□□□ -0.01
PRKCH-208ENST00000553846 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
PRKCH-208ENST00000553846 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
PRKCH-208ENST00000553846 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
PRKCH-208ENST00000553846 CFDP1Q9UEE9 299 aaPredicted RBP15.01□□□□□ -0.01
PRKCH-208ENST00000553846 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
PRKCH-208ENST00000553846 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
PRKCH-208ENST00000553846 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
PRKCH-208ENST00000553846 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
PRKCH-208ENST00000553846 LRRC7Q96NW7 1537 aa15□□□□□ -0.01
PRKCH-208ENST00000553846 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
PRKCH-208ENST00000553846 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
PRKCH-208ENST00000553846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRKCH-208ENST00000553846 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
PRKCH-208ENST00000553846 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
PRKCH-208ENST00000553846 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
PRKCH-208ENST00000553846 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
PRKCH-208ENST00000553846 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
PRKCH-208ENST00000553846 XIRP1Q702N8 1843 aaKnown RBP14.95□□□□□ -0.02
PRKCH-208ENST00000553846 RGS17Q9UGC6 210 aaPredicted RBP14.95□□□□□ -0.02
PRKCH-208ENST00000553846 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
PRKCH-208ENST00000553846 ABCC3O15438 1527 aa14.93□□□□□ -0.02
PRKCH-208ENST00000553846 MROH1Q8NDA8 1641 aa14.93□□□□□ -0.02
PRKCH-208ENST00000553846 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
PRKCH-208ENST00000553846 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PRKCH-208ENST00000553846 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
PRKCH-208ENST00000553846 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
PRKCH-208ENST00000553846 KIF3BO15066 747 aa14.91□□□□□ -0.02
PRKCH-208ENST00000553846 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
PRKCH-208ENST00000553846 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
PRKCH-208ENST00000553846 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
PRKCH-208ENST00000553846 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
PRKCH-208ENST00000553846 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
PRKCH-208ENST00000553846 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
PRKCH-208ENST00000553846 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
PRKCH-208ENST00000553846 SLIT1O75093 1534 aa14.87□□□□□ -0.03
PRKCH-208ENST00000553846 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
PRKCH-208ENST00000553846 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
PRKCH-208ENST00000553846 SCAF11Q99590 1463 aaKnown RBP14.85□□□□□ -0.03
PRKCH-208ENST00000553846 CEP152O94986 1710 aa14.83□□□□□ -0.03
PRKCH-208ENST00000553846 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
PRKCH-208ENST00000553846 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
PRKCH-208ENST00000553846 RSPH4AQ5TD94 716 aa14.81□□□□□ -0.04
PRKCH-208ENST00000553846 PRDM15P57071 1507 aaPredicted RBP14.8□□□□□ -0.04
PRKCH-208ENST00000553846 LTKP29376 864 aa14.79□□□□□ -0.04
PRKCH-208ENST00000553846 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
PRKCH-208ENST00000553846 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
PRKCH-208ENST00000553846 SETD1AO15047 1707 aaKnown RBP14.78□□□□□ -0.04
PRKCH-208ENST00000553846 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
PRKCH-208ENST00000553846 ROBO1Q9Y6N7 1651 aa14.77□□□□□ -0.04
PRKCH-208ENST00000553846 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
PRKCH-208ENST00000553846 TET3O43151 1660 aa14.76□□□□□ -0.05
PRKCH-208ENST00000553846 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
PRKCH-208ENST00000553846 NWD1Q149M9 1564 aa14.76□□□□□ -0.05
PRKCH-208ENST00000553846 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
PRKCH-208ENST00000553846 SRCAPQ6ZRS2 3230 aa14.73□□□□□ -0.05
PRKCH-208ENST00000553846 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
PRKCH-208ENST00000553846 DUOX2Q9NRD8 1548 aa14.72□□□□□ -0.05
PRKCH-208ENST00000553846 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
PRKCH-208ENST00000553846 NKTRP30414 1462 aaKnown RBP14.7□□□□□ -0.06
PRKCH-208ENST00000553846 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
PRKCH-208ENST00000553846 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
PRKCH-208ENST00000553846 CROCC2H7BZ55 1655 aa14.7□□□□□ -0.06
PRKCH-208ENST00000553846 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
PRKCH-208ENST00000553846 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
PRKCH-208ENST00000553846 EFCAB6Q5THR3 1501 aa14.68□□□□□ -0.06
PRKCH-208ENST00000553846 LMTK2Q8IWU2 1503 aa14.68□□□□□ -0.06
PRKCH-208ENST00000553846 COL16A1Q07092 1604 aaPredicted RBP14.68□□□□□ -0.06
PRKCH-208ENST00000553846 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
PRKCH-208ENST00000553846 PHLPP1O60346 1717 aa14.66□□□□□ -0.06
PRKCH-208ENST00000553846 LRP6O75581 1613 aa14.66□□□□□ -0.06
PRKCH-208ENST00000553846 KCNA6P17658 529 aa14.65□□□□□ -0.06
PRKCH-208ENST00000553846 ADGRB3O60242 1522 aa14.65□□□□□ -0.06
PRKCH-208ENST00000553846 NOS1P29475 1434 aa14.64□□□□□ -0.07
PRKCH-208ENST00000553846 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
PRKCH-208ENST00000553846 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
PRKCH-208ENST00000553846 ABCC5O15440 1437 aa14.62□□□□□ -0.07
PRKCH-208ENST00000553846 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
PRKCH-208ENST00000553846 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
PRKCH-208ENST00000553846 JCADQ9P266 1359 aa14.61□□□□□ -0.07
PRKCH-208ENST00000553846 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
PRKCH-208ENST00000553846 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
PRKCH-208ENST00000553846 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
PRKCH-208ENST00000553846 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
PRKCH-208ENST00000553846 SHPRHQ149N8 1683 aa14.59□□□□□ -0.07
PRKCH-208ENST00000553846 IDI1Q13907 227 aa14.59□□□□□ -0.07
PRKCH-208ENST00000553846 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.07
PRKCH-208ENST00000553846 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
PRKCH-208ENST00000553846 DIP2AQ14689 1571 aa14.58□□□□□ -0.08
PRKCH-208ENST00000553846 KANK4Q5T7N3 995 aaPredicted RBP14.57□□□□□ -0.08
PRKCH-208ENST00000553846 MSH6P52701 1360 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms