RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MYO3AQ8NEV4 1616 aa27.54■■■□□ 2
FOXN3-204ENST00000553840 EIF2AK4Q9P2K8 1649 aaKnown RBP27.54■■■□□ 2
FOXN3-204ENST00000553840 FBXO41Q8TF61 875 aa27.53■■■□□ 2
FOXN3-204ENST00000553840 ZNF142P52746 1687 aaPredicted RBP27.52■■■□□ 2
FOXN3-204ENST00000553840 SHANK2Q9UPX8 1470 aa27.51■■■□□ 2
FOXN3-204ENST00000553840 RNF17Q9BXT8 1623 aaKnown RBP27.5■■□□□ 1.99
FOXN3-204ENST00000553840 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
FOXN3-204ENST00000553840 TCOF1Q13428 1488 aaKnown RBP27.5■■□□□ 1.99
FOXN3-204ENST00000553840 DNMT1P26358 1616 aaKnown RBP27.49■■□□□ 1.99
FOXN3-204ENST00000553840 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
FOXN3-204ENST00000553840 CEP170BQ9Y4F5 1589 aaPredicted RBP27.49■■□□□ 1.99
FOXN3-204ENST00000553840 ABCC5O15440 1437 aa27.49■■□□□ 1.99
FOXN3-204ENST00000553840 PTPRTO14522 1441 aa27.48■■□□□ 1.99
FOXN3-204ENST00000553840 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
FOXN3-204ENST00000553840 PZPP20742 1482 aa27.47■■□□□ 1.99
FOXN3-204ENST00000553840 DAPK1P53355 1430 aa27.47■■□□□ 1.99
FOXN3-204ENST00000553840 NCOA1Q15788 1441 aa27.47■■□□□ 1.99
FOXN3-204ENST00000553840 KIF15Q9NS87 1388 aa27.44■■□□□ 1.98
FOXN3-204ENST00000553840 CERKQ8TCT0 537 aa27.43■■□□□ 1.98
FOXN3-204ENST00000553840 RRP7BPQ9NSQ0 103 aa27.42■■□□□ 1.98
FOXN3-204ENST00000553840 TNRQ92752 1358 aa27.42■■□□□ 1.98
FOXN3-204ENST00000553840 A2ML1A8K2U0 1454 aa27.41■■□□□ 1.98
FOXN3-204ENST00000553840 FBXO31Q5XUX0 539 aaPredicted RBP27.41■■□□□ 1.98
FOXN3-204ENST00000553840 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
FOXN3-204ENST00000553840 PLA2R1Q13018 1463 aa27.4■■□□□ 1.98
FOXN3-204ENST00000553840 ABCC3O15438 1527 aa27.39■■□□□ 1.98
FOXN3-204ENST00000553840 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
FOXN3-204ENST00000553840 PKD2Q13563 968 aa27.38■■□□□ 1.97
FOXN3-204ENST00000553840 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
FOXN3-204ENST00000553840 CEP152O94986 1710 aa27.36■■□□□ 1.97
FOXN3-204ENST00000553840 CHIC2Q9UKJ5 165 aa27.36■■□□□ 1.97
FOXN3-204ENST00000553840 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
FOXN3-204ENST00000553840 NCKAP5LQ9HCH0 1330 aa27.35■■□□□ 1.97
FOXN3-204ENST00000553840 NLRP1Q9C000 1473 aa27.32■■□□□ 1.96
FOXN3-204ENST00000553840 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
FOXN3-204ENST00000553840 KANK1Q14678 1352 aa27.3■■□□□ 1.96
FOXN3-204ENST00000553840 CFAP65Q6ZU64 1925 aaKnown RBP27.29■■□□□ 1.96
FOXN3-204ENST00000553840 DEPDC5O75140 1603 aa27.28■■□□□ 1.96
FOXN3-204ENST00000553840 SPATA31D1Q6ZQQ2 1576 aa27.28■■□□□ 1.96
FOXN3-204ENST00000553840 THEMISQ8N1K5 641 aaPredicted RBP27.28■■□□□ 1.96
FOXN3-204ENST00000553840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.28■■□□□ 1.968e-18■□□□□ 9.2
FOXN3-204ENST00000553840 ADGRL2O95490 1459 aa27.27■■□□□ 1.96
FOXN3-204ENST00000553840 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
FOXN3-204ENST00000553840 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.96
FOXN3-204ENST00000553840 ERVK-7P63135 1459 aa27.25■■□□□ 1.95
FOXN3-204ENST00000553840 ARHGAP31Q2M1Z3 1444 aa27.23■■□□□ 1.95
FOXN3-204ENST00000553840 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
FOXN3-204ENST00000553840 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
FOXN3-204ENST00000553840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.2■■□□□ 1.94
FOXN3-204ENST00000553840 ANKRD50Q9ULJ7 1429 aa27.16■■□□□ 1.94
FOXN3-204ENST00000553840 IQSEC2Q5JU85 1478 aa27.16■■□□□ 1.94
FOXN3-204ENST00000553840 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
FOXN3-204ENST00000553840 LMTK2Q8IWU2 1503 aa27.15■■□□□ 1.94
FOXN3-204ENST00000553840 ZNF335Q9H4Z2 1342 aaPredicted RBP27.15■■□□□ 1.94
FOXN3-204ENST00000553840 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
FOXN3-204ENST00000553840 VWDEQ8N2E2 1590 aa27.14■■□□□ 1.93
FOXN3-204ENST00000553840 UBR1Q8IWV7 1749 aa27.13■■□□□ 1.93
FOXN3-204ENST00000553840 ROCK1Q13464 1354 aa27.09■■□□□ 1.93
FOXN3-204ENST00000553840 MED14O60244 1454 aa27.08■■□□□ 1.93
FOXN3-204ENST00000553840 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
FOXN3-204ENST00000553840 EFCAB6Q5THR3 1501 aa27.07■■□□□ 1.92
FOXN3-204ENST00000553840 IQGAP1P46940 1657 aa27.06■■□□□ 1.92
FOXN3-204ENST00000553840 ITGAEP38570 1179 aa27.06■■□□□ 1.92
FOXN3-204ENST00000553840 STAG3Q9UJ98 1225 aa27.05■■□□□ 1.92
FOXN3-204ENST00000553840 PIK3C2BO00750 1634 aa27.04■■□□□ 1.92
FOXN3-204ENST00000553840 TET3O43151 1660 aa27.01■■□□□ 1.92
FOXN3-204ENST00000553840 KDM5AP29375 1690 aaKnown RBP27.01■■□□□ 1.92
FOXN3-204ENST00000553840 UNC13BO14795 1591 aa27.01■■□□□ 1.92
FOXN3-204ENST00000553840 CPS1P31327 1500 aa27.01■■□□□ 1.91
FOXN3-204ENST00000553840 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
FOXN3-204ENST00000553840 EID1Q9Y6B2 187 aa27■■□□□ 1.91
FOXN3-204ENST00000553840 SLIT1O75093 1534 aa27■■□□□ 1.91
FOXN3-204ENST00000553840 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
FOXN3-204ENST00000553840 GCC2Q8IWJ2 1684 aa26.99■■□□□ 1.91
FOXN3-204ENST00000553840 TXNDC2Q86VQ3 553 aa26.98■■□□□ 1.91
FOXN3-204ENST00000553840 ARHGAP23Q9P227 1491 aa26.98■■□□□ 1.91
FOXN3-204ENST00000553840 NOS1P29475 1434 aa26.98■■□□□ 1.91
FOXN3-204ENST00000553840 SYNMO15061 1565 aa26.97■■□□□ 1.91
FOXN3-204ENST00000553840 IDI1Q13907 227 aa26.97■■□□□ 1.91
FOXN3-204ENST00000553840 SLC52A1Q9NWF4 448 aa26.97■■□□□ 1.91
FOXN3-204ENST00000553840 UBAP1LF5GYI3 381 aa26.94■■□□□ 1.9
FOXN3-204ENST00000553840 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
FOXN3-204ENST00000553840 TMEM2Q9UHN6 1383 aa26.93■■□□□ 1.9
FOXN3-204ENST00000553840 LTKP29376 864 aa26.92■■□□□ 1.9
FOXN3-204ENST00000553840 IQGAP3Q86VI3 1631 aa26.91■■□□□ 1.9
FOXN3-204ENST00000553840 ADGRB3O60242 1522 aa26.9■■□□□ 1.9
FOXN3-204ENST00000553840 NUP155O75694 1391 aa26.89■■□□□ 1.9
FOXN3-204ENST00000553840 E9PCH4 1651 aa26.88■■□□□ 1.89
FOXN3-204ENST00000553840 TOM1O60784 492 aa26.84■■□□□ 1.89
FOXN3-204ENST00000553840 STRCP1A6NGW2 1772 aa26.83■■□□□ 1.89
FOXN3-204ENST00000553840 HDGFP51858 240 aaKnown RBP26.82■■□□□ 1.88
FOXN3-204ENST00000553840 MYO5BQ9ULV0 1848 aa26.81■■□□□ 1.88
FOXN3-204ENST00000553840 TMEM131LA2VDJ0 1609 aa26.77■■□□□ 1.88
FOXN3-204ENST00000553840 LRRC7Q96NW7 1537 aa26.77■■□□□ 1.88
FOXN3-204ENST00000553840 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
FOXN3-204ENST00000553840 CHGAP10645 457 aaKnown RBP26.77■■□□□ 1.88
FOXN3-204ENST00000553840 BCANQ96GW7 911 aa26.77■■□□□ 1.88
FOXN3-204ENST00000553840 PPP1R15AO75807 674 aaPredicted RBP26.74■■□□□ 1.87
FOXN3-204ENST00000553840 PIP4K2BP78356 416 aa26.73■■□□□ 1.87
FOXN3-204ENST00000553840 NAIPQ13075 1403 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms