RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
RDH11-205ENST00000553816 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
RDH11-205ENST00000553816 MAGI2Q86UL8 1455 aa12.92□□□□□ -0.34
RDH11-205ENST00000553816 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
RDH11-205ENST00000553816 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
RDH11-205ENST00000553816 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
RDH11-205ENST00000553816 ADAMTSL3P82987 1691 aa12.91□□□□□ -0.34
RDH11-205ENST00000553816 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
RDH11-205ENST00000553816 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
RDH11-205ENST00000553816 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
RDH11-205ENST00000553816 ATP10AO60312 1499 aa12.88□□□□□ -0.35
RDH11-205ENST00000553816 CAMSAP2Q08AD1 1489 aa12.88□□□□□ -0.35
RDH11-205ENST00000553816 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
RDH11-205ENST00000553816 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
RDH11-205ENST00000553816 PLEKHH2Q8IVE3 1493 aa12.87□□□□□ -0.35
RDH11-205ENST00000553816 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
RDH11-205ENST00000553816 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
RDH11-205ENST00000553816 C9orf84Q5VXU9 1444 aa12.86□□□□□ -0.35
RDH11-205ENST00000553816 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
RDH11-205ENST00000553816 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
RDH11-205ENST00000553816 RIMS1Q86UR5 1692 aaKnown RBP12.85□□□□□ -0.35
RDH11-205ENST00000553816 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
RDH11-205ENST00000553816 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
RDH11-205ENST00000553816 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
RDH11-205ENST00000553816 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
RDH11-205ENST00000553816 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
RDH11-205ENST00000553816 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
RDH11-205ENST00000553816 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
RDH11-205ENST00000553816 MLECQ14165 292 aa12.82□□□□□ -0.36
RDH11-205ENST00000553816 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
RDH11-205ENST00000553816 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
RDH11-205ENST00000553816 CCDC141Q6ZP82 1450 aa12.81□□□□□ -0.36
RDH11-205ENST00000553816 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
RDH11-205ENST00000553816 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
RDH11-205ENST00000553816 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
RDH11-205ENST00000553816 PTPRMP28827 1452 aa12.79□□□□□ -0.36
RDH11-205ENST00000553816 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
RDH11-205ENST00000553816 AGLP35573 1532 aa12.78□□□□□ -0.36
RDH11-205ENST00000553816 RTEL1-TNFRSF6BF6WH68 1400 aa12.78□□□□□ -0.36
RDH11-205ENST00000553816 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.36
RDH11-205ENST00000553816 A2MP01023 1474 aa12.77□□□□□ -0.37
RDH11-205ENST00000553816 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.37
RDH11-205ENST00000553816 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
RDH11-205ENST00000553816 ABCC5O15440 1437 aa12.74□□□□□ -0.37
RDH11-205ENST00000553816 RSPH4AQ5TD94 716 aa12.74□□□□□ -0.37
RDH11-205ENST00000553816 C3P01024 1663 aa12.73□□□□□ -0.37
RDH11-205ENST00000553816 DAPK1P53355 1430 aa12.72□□□□□ -0.37
RDH11-205ENST00000553816 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
RDH11-205ENST00000553816 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
RDH11-205ENST00000553816 TSPY4P0CV99 314 aa12.71□□□□□ -0.37
RDH11-205ENST00000553816 TSPY10P0CW01 314 aa12.71□□□□□ -0.37
RDH11-205ENST00000553816 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
RDH11-205ENST00000553816 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
RDH11-205ENST00000553816 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
RDH11-205ENST00000553816 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
RDH11-205ENST00000553816 GGT6Q6P531 493 aa12.67□□□□□ -0.38
RDH11-205ENST00000553816 CHIC2Q9UKJ5 165 aa12.67□□□□□ -0.38
RDH11-205ENST00000553816 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
RDH11-205ENST00000553816 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
RDH11-205ENST00000553816 KIF3BO15066 747 aa12.66□□□□□ -0.38
RDH11-205ENST00000553816 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
RDH11-205ENST00000553816 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
RDH11-205ENST00000553816 PREX1Q8TCU6 1659 aa12.65□□□□□ -0.38
RDH11-205ENST00000553816 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
RDH11-205ENST00000553816 DUOX2Q9NRD8 1548 aa12.65□□□□□ -0.38
RDH11-205ENST00000553816 CEP152O94986 1710 aa12.65□□□□□ -0.38
RDH11-205ENST00000553816 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
RDH11-205ENST00000553816 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
RDH11-205ENST00000553816 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
RDH11-205ENST00000553816 KIF15Q9NS87 1388 aa12.63□□□□□ -0.39
RDH11-205ENST00000553816 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
RDH11-205ENST00000553816 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
RDH11-205ENST00000553816 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
RDH11-205ENST00000553816 SETD1BQ9UPS6 1966 aaKnown RBP12.62□□□□□ -0.39
RDH11-205ENST00000553816 ZMYM3Q14202 1370 aa12.62□□□□□ -0.39
RDH11-205ENST00000553816 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
RDH11-205ENST00000553816 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
RDH11-205ENST00000553816 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
RDH11-205ENST00000553816 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
RDH11-205ENST00000553816 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
RDH11-205ENST00000553816 CLCN6P51797 869 aa12.6□□□□□ -0.39
RDH11-205ENST00000553816 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
RDH11-205ENST00000553816 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
RDH11-205ENST00000553816 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
RDH11-205ENST00000553816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
RDH11-205ENST00000553816 ZC3H13Q5T200 1668 aaKnown RBP12.59□□□□□ -0.39
RDH11-205ENST00000553816 ITGAEP38570 1179 aa12.59□□□□□ -0.39
RDH11-205ENST00000553816 ERBINQ96RT1 1412 aa12.59□□□□□ -0.39
RDH11-205ENST00000553816 ABCC3O15438 1527 aa12.58□□□□□ -0.4
RDH11-205ENST00000553816 HSPA2P54652 639 aa12.58□□□□□ -0.4
RDH11-205ENST00000553816 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
RDH11-205ENST00000553816 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.4
RDH11-205ENST00000553816 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
RDH11-205ENST00000553816 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
RDH11-205ENST00000553816 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
RDH11-205ENST00000553816 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
RDH11-205ENST00000553816 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
RDH11-205ENST00000553816 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
RDH11-205ENST00000553816 ZNF142P52746 1687 aaPredicted RBP12.54□□□□□ -0.4
RDH11-205ENST00000553816 NPATQ14207 1427 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms