RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 KIF3BO15066 747 aa17.79■□□□□ 0.44
PSMC6-204ENST00000553798 FER1L4A9Z1Z3 1794 aa17.79■□□□□ 0.44
PSMC6-204ENST00000553798 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
PSMC6-204ENST00000553798 RIMS1Q86UR5 1692 aaKnown RBP17.77■□□□□ 0.44
PSMC6-204ENST00000553798 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
PSMC6-204ENST00000553798 GGT6Q6P531 493 aa17.77■□□□□ 0.44
PSMC6-204ENST00000553798 ERBINQ96RT1 1412 aa17.77■□□□□ 0.44
PSMC6-204ENST00000553798 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
PSMC6-204ENST00000553798 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
PSMC6-204ENST00000553798 RNF17Q9BXT8 1623 aaKnown RBP17.74■□□□□ 0.43
PSMC6-204ENST00000553798 MAPK8IP2Q13387 824 aaPredicted RBP17.73■□□□□ 0.43
PSMC6-204ENST00000553798 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
PSMC6-204ENST00000553798 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
PSMC6-204ENST00000553798 ITGAEP38570 1179 aa17.72■□□□□ 0.43
PSMC6-204ENST00000553798 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
PSMC6-204ENST00000553798 MROH2AA6NES4 1674 aa17.71■□□□□ 0.42
PSMC6-204ENST00000553798 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
PSMC6-204ENST00000553798 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
PSMC6-204ENST00000553798 KDM5DQ9BY66 1539 aa17.68■□□□□ 0.42
PSMC6-204ENST00000553798 CEBPAP49715 358 aaPredicted RBP17.68■□□□□ 0.42
PSMC6-204ENST00000553798 DEPDC5O75140 1603 aa17.68■□□□□ 0.42
PSMC6-204ENST00000553798 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
PSMC6-204ENST00000553798 CLTCQ00610 1675 aaKnown RBP17.67■□□□□ 0.42
PSMC6-204ENST00000553798 C3P01024 1663 aa17.67■□□□□ 0.42
PSMC6-204ENST00000553798 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
PSMC6-204ENST00000553798 ABCC3O15438 1527 aa17.64■□□□□ 0.41
PSMC6-204ENST00000553798 ZC3H13Q5T200 1668 aaKnown RBP17.64■□□□□ 0.41
PSMC6-204ENST00000553798 NPATQ14207 1427 aa17.64■□□□□ 0.41
PSMC6-204ENST00000553798 VWDEQ8N2E2 1590 aa17.63■□□□□ 0.41
PSMC6-204ENST00000553798 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
PSMC6-204ENST00000553798 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
PSMC6-204ENST00000553798 NAIPQ13075 1403 aa17.63■□□□□ 0.41
PSMC6-204ENST00000553798 KANK1Q14678 1352 aa17.62■□□□□ 0.41
PSMC6-204ENST00000553798 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
PSMC6-204ENST00000553798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
PSMC6-204ENST00000553798 PZPP20742 1482 aa17.6■□□□□ 0.41
PSMC6-204ENST00000553798 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
PSMC6-204ENST00000553798 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
PSMC6-204ENST00000553798 UNC13BO14795 1591 aa17.58■□□□□ 0.41
PSMC6-204ENST00000553798 GCC2Q8IWJ2 1684 aa17.58■□□□□ 0.4
PSMC6-204ENST00000553798 LMTK3Q96Q04 1460 aa17.57■□□□□ 0.4
PSMC6-204ENST00000553798 CEP152O94986 1710 aa17.57■□□□□ 0.4
PSMC6-204ENST00000553798 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
PSMC6-204ENST00000553798 PREX1Q8TCU6 1659 aa17.55■□□□□ 0.4
PSMC6-204ENST00000553798 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
PSMC6-204ENST00000553798 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
PSMC6-204ENST00000553798 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.39
PSMC6-204ENST00000553798 NUP155O75694 1391 aa17.52■□□□□ 0.39
PSMC6-204ENST00000553798 TNRQ92752 1358 aa17.52■□□□□ 0.39
PSMC6-204ENST00000553798 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
PSMC6-204ENST00000553798 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
PSMC6-204ENST00000553798 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
PSMC6-204ENST00000553798 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
PSMC6-204ENST00000553798 TET3O43151 1660 aa17.49■□□□□ 0.39
PSMC6-204ENST00000553798 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
PSMC6-204ENST00000553798 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
PSMC6-204ENST00000553798 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
PSMC6-204ENST00000553798 NOS1P29475 1434 aa17.47■□□□□ 0.39
PSMC6-204ENST00000553798 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
PSMC6-204ENST00000553798 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
PSMC6-204ENST00000553798 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
PSMC6-204ENST00000553798 A2ML1A8K2U0 1454 aa17.45■□□□□ 0.38
PSMC6-204ENST00000553798 HSPA2P54652 639 aa17.45■□□□□ 0.38
PSMC6-204ENST00000553798 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
PSMC6-204ENST00000553798 E9PCH4 1651 aa17.42■□□□□ 0.38
PSMC6-204ENST00000553798 HRCP23327 699 aa17.42■□□□□ 0.38
PSMC6-204ENST00000553798 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
PSMC6-204ENST00000553798 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
PSMC6-204ENST00000553798 SYNMO15061 1565 aa17.4■□□□□ 0.38
PSMC6-204ENST00000553798 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
PSMC6-204ENST00000553798 IDI1Q13907 227 aa17.38■□□□□ 0.37
PSMC6-204ENST00000553798 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
PSMC6-204ENST00000553798 PTPRTO14522 1441 aa17.38■□□□□ 0.37
PSMC6-204ENST00000553798 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
PSMC6-204ENST00000553798 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
PSMC6-204ENST00000553798 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
PSMC6-204ENST00000553798 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
PSMC6-204ENST00000553798 PKD2Q13563 968 aa17.35■□□□□ 0.37
PSMC6-204ENST00000553798 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
PSMC6-204ENST00000553798 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
PSMC6-204ENST00000553798 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
PSMC6-204ENST00000553798 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
PSMC6-204ENST00000553798 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.37
PSMC6-204ENST00000553798 SPHKAPQ2M3C7 1700 aa17.31■□□□□ 0.36
PSMC6-204ENST00000553798 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
PSMC6-204ENST00000553798 NCKAP5LQ9HCH0 1330 aa17.29■□□□□ 0.36
PSMC6-204ENST00000553798 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
PSMC6-204ENST00000553798 ADGRB3O60242 1522 aa17.29■□□□□ 0.36
PSMC6-204ENST00000553798 SLIT1O75093 1534 aa17.29■□□□□ 0.36
PSMC6-204ENST00000553798 TRPM2O94759 1503 aa17.29■□□□□ 0.36
PSMC6-204ENST00000553798 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
PSMC6-204ENST00000553798 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
PSMC6-204ENST00000553798 TMEM131LA2VDJ0 1609 aa17.27■□□□□ 0.36
PSMC6-204ENST00000553798 MED14O60244 1454 aa17.26■□□□□ 0.35
PSMC6-204ENST00000553798 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
PSMC6-204ENST00000553798 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
PSMC6-204ENST00000553798 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
PSMC6-204ENST00000553798 LTKP29376 864 aa17.23■□□□□ 0.35
PSMC6-204ENST00000553798 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
PSMC6-204ENST00000553798 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms