RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
PCNX1-204ENST00000553428 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
PCNX1-204ENST00000553428 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.37
PCNX1-204ENST00000553428 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
PCNX1-204ENST00000553428 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
PCNX1-204ENST00000553428 NCOA1Q15788 1441 aa12.71□□□□□ -0.38
PCNX1-204ENST00000553428 C3P01024 1663 aa12.7□□□□□ -0.38
PCNX1-204ENST00000553428 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
PCNX1-204ENST00000553428 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
PCNX1-204ENST00000553428 PTPRKQ15262 1439 aa12.69□□□□□ -0.38
PCNX1-204ENST00000553428 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
PCNX1-204ENST00000553428 PREX1Q8TCU6 1659 aa12.68□□□□□ -0.38
PCNX1-204ENST00000553428 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
PCNX1-204ENST00000553428 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
PCNX1-204ENST00000553428 PZPP20742 1482 aa12.66□□□□□ -0.38
PCNX1-204ENST00000553428 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
PCNX1-204ENST00000553428 HSPA2P54652 639 aa12.66□□□□□ -0.38
PCNX1-204ENST00000553428 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
PCNX1-204ENST00000553428 KANK1Q14678 1352 aa12.65□□□□□ -0.38
PCNX1-204ENST00000553428 ANKRD50Q9ULJ7 1429 aa12.64□□□□□ -0.39
PCNX1-204ENST00000553428 ABCC3O15438 1527 aa12.64□□□□□ -0.39
PCNX1-204ENST00000553428 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
PCNX1-204ENST00000553428 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
PCNX1-204ENST00000553428 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
PCNX1-204ENST00000553428 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
PCNX1-204ENST00000553428 TNRQ92752 1358 aa12.63□□□□□ -0.39
PCNX1-204ENST00000553428 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
PCNX1-204ENST00000553428 FBXO31Q5XUX0 539 aaPredicted RBP12.61□□□□□ -0.39
PCNX1-204ENST00000553428 DEPDC5O75140 1603 aa12.6□□□□□ -0.39
PCNX1-204ENST00000553428 LMTK2Q8IWU2 1503 aa12.6□□□□□ -0.39
PCNX1-204ENST00000553428 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
PCNX1-204ENST00000553428 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
PCNX1-204ENST00000553428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCNX1-204ENST00000553428 VWDEQ8N2E2 1590 aa12.59□□□□□ -0.39
PCNX1-204ENST00000553428 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
PCNX1-204ENST00000553428 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
PCNX1-204ENST00000553428 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
PCNX1-204ENST00000553428 ERVK-7P63135 1459 aa12.58□□□□□ -0.4
PCNX1-204ENST00000553428 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
PCNX1-204ENST00000553428 SPATA31D1Q6ZQQ2 1576 aa12.57□□□□□ -0.4
PCNX1-204ENST00000553428 PTPRTO14522 1441 aa12.57□□□□□ -0.4
PCNX1-204ENST00000553428 ITGAEP38570 1179 aa12.57□□□□□ -0.4
PCNX1-204ENST00000553428 PKD2Q13563 968 aa12.57□□□□□ -0.4
PCNX1-204ENST00000553428 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
PCNX1-204ENST00000553428 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
PCNX1-204ENST00000553428 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
PCNX1-204ENST00000553428 CEP152O94986 1710 aa12.53□□□□□ -0.4
PCNX1-204ENST00000553428 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.41
PCNX1-204ENST00000553428 UNC13BO14795 1591 aa12.52□□□□□ -0.41
PCNX1-204ENST00000553428 UGGT1Q9NYU2 1555 aa12.52□□□□□ -0.41
PCNX1-204ENST00000553428 STRCQ7RTU9 1775 aa12.51□□□□□ -0.41
PCNX1-204ENST00000553428 NOS1P29475 1434 aa12.51□□□□□ -0.41
PCNX1-204ENST00000553428 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
PCNX1-204ENST00000553428 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
PCNX1-204ENST00000553428 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
PCNX1-204ENST00000553428 NUP155O75694 1391 aa12.5□□□□□ -0.41
PCNX1-204ENST00000553428 HFM1A2PYH4 1435 aa12.5□□□□□ -0.41
PCNX1-204ENST00000553428 NAIPQ13075 1403 aa12.49□□□□□ -0.41
PCNX1-204ENST00000553428 TET3O43151 1660 aa12.48□□□□□ -0.41
PCNX1-204ENST00000553428 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
PCNX1-204ENST00000553428 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
PCNX1-204ENST00000553428 IDI1Q13907 227 aa12.46□□□□□ -0.41
PCNX1-204ENST00000553428 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
PCNX1-204ENST00000553428 MED14O60244 1454 aa12.46□□□□□ -0.42
PCNX1-204ENST00000553428 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
PCNX1-204ENST00000553428 ARHGAP23Q9P227 1491 aa12.44□□□□□ -0.42
PCNX1-204ENST00000553428 GCC2Q8IWJ2 1684 aa12.44□□□□□ -0.42
PCNX1-204ENST00000553428 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
PCNX1-204ENST00000553428 SYNMO15061 1565 aa12.43□□□□□ -0.42
PCNX1-204ENST00000553428 SLIT1O75093 1534 aa12.43□□□□□ -0.42
PCNX1-204ENST00000553428 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
PCNX1-204ENST00000553428 FBXO41Q8TF61 875 aa12.43□□□□□ -0.42
PCNX1-204ENST00000553428 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
PCNX1-204ENST00000553428 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
PCNX1-204ENST00000553428 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
PCNX1-204ENST00000553428 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
PCNX1-204ENST00000553428 HDGFP51858 240 aaKnown RBP12.41□□□□□ -0.42
PCNX1-204ENST00000553428 TXNDC2Q86VQ3 553 aa12.41□□□□□ -0.42
PCNX1-204ENST00000553428 NEURL4Q96JN8 1562 aa12.41□□□□□ -0.42
PCNX1-204ENST00000553428 PIK3C2BO00750 1634 aa12.4□□□□□ -0.42
PCNX1-204ENST00000553428 TRIM52Q96A61 297 aa12.4□□□□□ -0.42
PCNX1-204ENST00000553428 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
PCNX1-204ENST00000553428 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.43
PCNX1-204ENST00000553428 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.43
PCNX1-204ENST00000553428 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
PCNX1-204ENST00000553428 E9PCH4 1651 aa12.39□□□□□ -0.43
PCNX1-204ENST00000553428 LTKP29376 864 aa12.39□□□□□ -0.43
PCNX1-204ENST00000553428 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
PCNX1-204ENST00000553428 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-204ENST00000553428 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-204ENST00000553428 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCNX1-204ENST00000553428 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
PCNX1-204ENST00000553428 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
PCNX1-204ENST00000553428 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
PCNX1-204ENST00000553428 CPS1P31327 1500 aa12.35□□□□□ -0.43
PCNX1-204ENST00000553428 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
PCNX1-204ENST00000553428 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
PCNX1-204ENST00000553428 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
PCNX1-204ENST00000553428 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.43
PCNX1-204ENST00000553428 TRPM2O94759 1503 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms