RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-208ENST00000553370 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-208ENST00000553370 RTEL1-TNFRSF6BF6WH68 1400 aa15.72■□□□□ 0.11
ACTN1-208ENST00000553370 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
ACTN1-208ENST00000553370 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
ACTN1-208ENST00000553370 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
ACTN1-208ENST00000553370 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
ACTN1-208ENST00000553370 NCKAP5LQ9HCH0 1330 aa15.7■□□□□ 0.1
ACTN1-208ENST00000553370 LTBP4Q8N2S1 1624 aa15.7■□□□□ 0.1
ACTN1-208ENST00000553370 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
ACTN1-208ENST00000553370 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
ACTN1-208ENST00000553370 FAM135AQ9P2D6 1515 aa15.69■□□□□ 0.1
ACTN1-208ENST00000553370 KIF3BO15066 747 aa15.69■□□□□ 0.1
ACTN1-208ENST00000553370 DHX29Q7Z478 1369 aaKnown RBP15.69■□□□□ 0.1
ACTN1-208ENST00000553370 IQSEC2Q5JU85 1478 aa15.69■□□□□ 0.1
ACTN1-208ENST00000553370 SPATA31D1Q6ZQQ2 1576 aa15.68■□□□□ 0.1
ACTN1-208ENST00000553370 A2ML1A8K2U0 1454 aa15.68■□□□□ 0.1
ACTN1-208ENST00000553370 DISP3Q9P2K9 1392 aa15.68■□□□□ 0.1
ACTN1-208ENST00000553370 PKD2Q13563 968 aa15.68■□□□□ 0.1
ACTN1-208ENST00000553370 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
ACTN1-208ENST00000553370 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
ACTN1-208ENST00000553370 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
ACTN1-208ENST00000553370 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
ACTN1-208ENST00000553370 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
ACTN1-208ENST00000553370 ZC3H13Q5T200 1668 aaKnown RBP15.66■□□□□ 0.1
ACTN1-208ENST00000553370 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
ACTN1-208ENST00000553370 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
ACTN1-208ENST00000553370 TNRQ92752 1358 aa15.65■□□□□ 0.1
ACTN1-208ENST00000553370 PZPP20742 1482 aa15.65■□□□□ 0.1
ACTN1-208ENST00000553370 CEP152O94986 1710 aa15.64■□□□□ 0.09
ACTN1-208ENST00000553370 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
ACTN1-208ENST00000553370 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-208ENST00000553370 RNF17Q9BXT8 1623 aaKnown RBP15.63■□□□□ 0.09
ACTN1-208ENST00000553370 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
ACTN1-208ENST00000553370 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
ACTN1-208ENST00000553370 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
ACTN1-208ENST00000553370 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
ACTN1-208ENST00000553370 APLP2Q06481 763 aa15.6■□□□□ 0.09
ACTN1-208ENST00000553370 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
ACTN1-208ENST00000553370 UGGT1Q9NYU2 1555 aa15.58■□□□□ 0.09
ACTN1-208ENST00000553370 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-208ENST00000553370 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.08
ACTN1-208ENST00000553370 NLRP1Q9C000 1473 aa15.58■□□□□ 0.08
ACTN1-208ENST00000553370 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
ACTN1-208ENST00000553370 IQGAP1P46940 1657 aa15.57■□□□□ 0.08
ACTN1-208ENST00000553370 ABCC3O15438 1527 aa15.57■□□□□ 0.08
ACTN1-208ENST00000553370 MAP3K1Q13233 1512 aa15.57■□□□□ 0.08
ACTN1-208ENST00000553370 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
ACTN1-208ENST00000553370 CPS1P31327 1500 aa15.55■□□□□ 0.08
ACTN1-208ENST00000553370 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
ACTN1-208ENST00000553370 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
ACTN1-208ENST00000553370 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
ACTN1-208ENST00000553370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
ACTN1-208ENST00000553370 ANKLE2Q86XL3 938 aa15.54■□□□□ 0.08
ACTN1-208ENST00000553370 THEMISQ8N1K5 641 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-208ENST00000553370 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-208ENST00000553370 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
ACTN1-208ENST00000553370 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
ACTN1-208ENST00000553370 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
ACTN1-208ENST00000553370 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
ACTN1-208ENST00000553370 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-208ENST00000553370 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-208ENST00000553370 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
ACTN1-208ENST00000553370 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
ACTN1-208ENST00000553370 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
ACTN1-208ENST00000553370 TOM1O60784 492 aa15.48■□□□□ 0.07
ACTN1-208ENST00000553370 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
ACTN1-208ENST00000553370 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-208ENST00000553370 SYNMO15061 1565 aa15.47■□□□□ 0.07
ACTN1-208ENST00000553370 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
ACTN1-208ENST00000553370 KANK1Q14678 1352 aa15.47■□□□□ 0.07
ACTN1-208ENST00000553370 ILDR2Q71H61 639 aa15.46■□□□□ 0.07
ACTN1-208ENST00000553370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.071e-6■□□□□ 9.6
ACTN1-208ENST00000553370 RRP7BPQ9NSQ0 103 aa15.45■□□□□ 0.06
ACTN1-208ENST00000553370 MED14O60244 1454 aa15.45■□□□□ 0.06
ACTN1-208ENST00000553370 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
ACTN1-208ENST00000553370 DAPK1P53355 1430 aa15.43■□□□□ 0.06
ACTN1-208ENST00000553370 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
ACTN1-208ENST00000553370 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
ACTN1-208ENST00000553370 SOCS7O14512 581 aa15.43■□□□□ 0.06
ACTN1-208ENST00000553370 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
ACTN1-208ENST00000553370 SCAF11Q99590 1463 aaKnown RBP15.42■□□□□ 0.06
ACTN1-208ENST00000553370 ABCC5O15440 1437 aa15.42■□□□□ 0.06
ACTN1-208ENST00000553370 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
ACTN1-208ENST00000553370 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
ACTN1-208ENST00000553370 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-208ENST00000553370 HSPA1LP34931 641 aa15.39■□□□□ 0.05
ACTN1-208ENST00000553370 EID1Q9Y6B2 187 aa15.39■□□□□ 0.05
ACTN1-208ENST00000553370 KDM5AP29375 1690 aaKnown RBP15.38■□□□□ 0.05
ACTN1-208ENST00000553370 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
ACTN1-208ENST00000553370 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
ACTN1-208ENST00000553370 TXNDC2Q86VQ3 553 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 SLIT1O75093 1534 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
ACTN1-208ENST00000553370 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
ACTN1-208ENST00000553370 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
ACTN1-208ENST00000553370 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms