RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 CROCC2H7BZ55 1655 aa27.86■■■□□ 2.05
PNN-202ENST00000553331 CAMSAP1Q5T5Y3 1602 aa27.85■■■□□ 2.05
PNN-202ENST00000553331 ABCC5O15440 1437 aa27.85■■■□□ 2.05
PNN-202ENST00000553331 FBXO31Q5XUX0 539 aaPredicted RBP27.85■■■□□ 2.05
PNN-202ENST00000553331 RRP7BPQ9NSQ0 103 aa27.84■■■□□ 2.05
PNN-202ENST00000553331 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
PNN-202ENST00000553331 DAPK1P53355 1430 aa27.82■■■□□ 2.04
PNN-202ENST00000553331 NCOA1Q15788 1441 aa27.82■■■□□ 2.04
PNN-202ENST00000553331 TCOF1Q13428 1488 aaKnown RBP27.82■■■□□ 2.04
PNN-202ENST00000553331 ZNF142P52746 1687 aaPredicted RBP27.81■■■□□ 2.04
PNN-202ENST00000553331 CHIC2Q9UKJ5 165 aa27.81■■■□□ 2.04
PNN-202ENST00000553331 DUOX2Q9NRD8 1548 aa27.81■■■□□ 2.04
PNN-202ENST00000553331 FAM135AQ9P2D6 1515 aa27.81■■■□□ 2.04
PNN-202ENST00000553331 DNMT1P26358 1616 aaKnown RBP27.81■■■□□ 2.04
PNN-202ENST00000553331 RNF17Q9BXT8 1623 aaKnown RBP27.81■■■□□ 2.04
PNN-202ENST00000553331 CERKQ8TCT0 537 aa27.8■■■□□ 2.04
PNN-202ENST00000553331 NCKAP5LQ9HCH0 1330 aa27.8■■■□□ 2.04
PNN-202ENST00000553331 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
PNN-202ENST00000553331 SHANK2Q9UPX8 1470 aa27.8■■■□□ 2.04
PNN-202ENST00000553331 EIF2AK4Q9P2K8 1649 aaKnown RBP27.8■■■□□ 2.04
PNN-202ENST00000553331 PZPP20742 1482 aa27.79■■■□□ 2.04
PNN-202ENST00000553331 TNRQ92752 1358 aa27.79■■■□□ 2.04
PNN-202ENST00000553331 FAM50AQ14320 339 aaKnown RBP27.79■■■□□ 2.04
PNN-202ENST00000553331 PTPRTO14522 1441 aa27.77■■■□□ 2.04
PNN-202ENST00000553331 ABCC3O15438 1527 aa27.74■■■□□ 2.03
PNN-202ENST00000553331 A2ML1A8K2U0 1454 aa27.74■■■□□ 2.03
PNN-202ENST00000553331 CEP152O94986 1710 aa27.73■■■□□ 2.03
PNN-202ENST00000553331 ZC3H13Q5T200 1668 aaKnown RBP27.72■■■□□ 2.03
PNN-202ENST00000553331 MROH1Q8NDA8 1641 aa27.72■■■□□ 2.03
PNN-202ENST00000553331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.72■■■□□ 2.031e-11■■□□□ 13.7
PNN-202ENST00000553331 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
PNN-202ENST00000553331 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
PNN-202ENST00000553331 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
PNN-202ENST00000553331 ERBINQ96RT1 1412 aa27.69■■■□□ 2.02
PNN-202ENST00000553331 PLA2R1Q13018 1463 aa27.68■■■□□ 2.02
PNN-202ENST00000553331 PKD2Q13563 968 aa27.67■■■□□ 2.02
PNN-202ENST00000553331 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
PNN-202ENST00000553331 NLRP1Q9C000 1473 aa27.61■■■□□ 2.01
PNN-202ENST00000553331 ERVK-7P63135 1459 aa27.6■■■□□ 2.01
PNN-202ENST00000553331 KANK1Q14678 1352 aa27.6■■■□□ 2.01
PNN-202ENST00000553331 SPATA31D1Q6ZQQ2 1576 aa27.59■■■□□ 2.01
PNN-202ENST00000553331 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
PNN-202ENST00000553331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.59■■■□□ 2.01
PNN-202ENST00000553331 THEMISQ8N1K5 641 aaPredicted RBP27.58■■■□□ 2.01
PNN-202ENST00000553331 DEPDC5O75140 1603 aa27.58■■■□□ 2.01
PNN-202ENST00000553331 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
PNN-202ENST00000553331 LTBP4Q8N2S1 1624 aa27.57■■■□□ 2
PNN-202ENST00000553331 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
PNN-202ENST00000553331 ADGRL2O95490 1459 aa27.57■■■□□ 2
PNN-202ENST00000553331 ANKLE2Q86XL3 938 aa27.54■■■□□ 2
PNN-202ENST00000553331 ITGAEP38570 1179 aa27.53■■■□□ 2
PNN-202ENST00000553331 NEURL4Q96JN8 1562 aa27.5■■□□□ 1.99
PNN-202ENST00000553331 ARHGAP31Q2M1Z3 1444 aa27.5■■□□□ 1.99
PNN-202ENST00000553331 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
PNN-202ENST00000553331 UBR1Q8IWV7 1749 aa27.45■■□□□ 1.99
PNN-202ENST00000553331 VWDEQ8N2E2 1590 aa27.45■■□□□ 1.99
PNN-202ENST00000553331 LMTK2Q8IWU2 1503 aa27.43■■□□□ 1.98
PNN-202ENST00000553331 NPHP4O75161 1426 aaPredicted RBP27.42■■□□□ 1.98
PNN-202ENST00000553331 STAG3Q9UJ98 1225 aa27.41■■□□□ 1.98
PNN-202ENST00000553331 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
PNN-202ENST00000553331 IQSEC2Q5JU85 1478 aa27.39■■□□□ 1.98
PNN-202ENST00000553331 PIK3C2BO00750 1634 aa27.39■■□□□ 1.98
PNN-202ENST00000553331 EFCAB6Q5THR3 1501 aa27.39■■□□□ 1.98
PNN-202ENST00000553331 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
PNN-202ENST00000553331 MED14O60244 1454 aa27.37■■□□□ 1.97
PNN-202ENST00000553331 TXNDC2Q86VQ3 553 aa27.35■■□□□ 1.97
PNN-202ENST00000553331 IDI1Q13907 227 aa27.34■■□□□ 1.97
PNN-202ENST00000553331 SYNMO15061 1565 aa27.34■■□□□ 1.97
PNN-202ENST00000553331 UBAP1LF5GYI3 381 aa27.33■■□□□ 1.97
PNN-202ENST00000553331 LTKP29376 864 aa27.32■■□□□ 1.96
PNN-202ENST00000553331 SCAF11Q99590 1463 aaKnown RBP27.32■■□□□ 1.96
PNN-202ENST00000553331 UNC13BO14795 1591 aa27.31■■□□□ 1.96
PNN-202ENST00000553331 TET3O43151 1660 aa27.31■■□□□ 1.96
PNN-202ENST00000553331 EID1Q9Y6B2 187 aa27.31■■□□□ 1.96
PNN-202ENST00000553331 NOS1P29475 1434 aa27.3■■□□□ 1.96
PNN-202ENST00000553331 SLIT1O75093 1534 aa27.29■■□□□ 1.96
PNN-202ENST00000553331 CPS1P31327 1500 aa27.29■■□□□ 1.96
PNN-202ENST00000553331 GCC2Q8IWJ2 1684 aa27.28■■□□□ 1.96
PNN-202ENST00000553331 ARHGAP23Q9P227 1491 aa27.28■■□□□ 1.96
PNN-202ENST00000553331 RPRD2Q5VT52 1461 aaKnown RBP27.26■■□□□ 1.95
PNN-202ENST00000553331 TMEM2Q9UHN6 1383 aa27.26■■□□□ 1.95
PNN-202ENST00000553331 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
PNN-202ENST00000553331 NUP155O75694 1391 aa27.24■■□□□ 1.95
PNN-202ENST00000553331 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
PNN-202ENST00000553331 KDM5AP29375 1690 aaKnown RBP27.24■■□□□ 1.95
PNN-202ENST00000553331 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
PNN-202ENST00000553331 ADGRB3O60242 1522 aa27.22■■□□□ 1.95
PNN-202ENST00000553331 E9PCH4 1651 aa27.22■■□□□ 1.95
PNN-202ENST00000553331 IQGAP3Q86VI3 1631 aa27.22■■□□□ 1.95
PNN-202ENST00000553331 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
PNN-202ENST00000553331 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
PNN-202ENST00000553331 CHGAP10645 457 aaKnown RBP27.19■■□□□ 1.94
PNN-202ENST00000553331 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
PNN-202ENST00000553331 PIP4K2BP78356 416 aa27.18■■□□□ 1.94
PNN-202ENST00000553331 BCANQ96GW7 911 aa27.18■■□□□ 1.94
PNN-202ENST00000553331 TOM1O60784 492 aa27.15■■□□□ 1.94
PNN-202ENST00000553331 SLC26A8Q96RN1 970 aa27.13■■□□□ 1.93
PNN-202ENST00000553331 LRRC7Q96NW7 1537 aa27.12■■□□□ 1.93
PNN-202ENST00000553331 PPP1R15AO75807 674 aaPredicted RBP27.11■■□□□ 1.93
PNN-202ENST00000553331 TMEM131LA2VDJ0 1609 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms