RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 TOM1O60784 492 aa13.09□□□□□ -0.31
PCNX1-203ENST00000553272 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
PCNX1-203ENST00000553272 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
PCNX1-203ENST00000553272 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
PCNX1-203ENST00000553272 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
PCNX1-203ENST00000553272 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.32
PCNX1-203ENST00000553272 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
PCNX1-203ENST00000553272 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
PCNX1-203ENST00000553272 SYNMO15061 1565 aa13.06□□□□□ -0.32
PCNX1-203ENST00000553272 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
PCNX1-203ENST00000553272 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-203ENST00000553272 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.33
PCNX1-203ENST00000553272 ZNF644Q9H582 1327 aaPredicted RBP13.02□□□□□ -0.33
PCNX1-203ENST00000553272 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
PCNX1-203ENST00000553272 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
PCNX1-203ENST00000553272 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
PCNX1-203ENST00000553272 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
PCNX1-203ENST00000553272 DEPDC5O75140 1603 aa13□□□□□ -0.33
PCNX1-203ENST00000553272 TNRQ92752 1358 aa13□□□□□ -0.33
PCNX1-203ENST00000553272 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
PCNX1-203ENST00000553272 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
PCNX1-203ENST00000553272 PZPP20742 1482 aa12.98□□□□□ -0.33
PCNX1-203ENST00000553272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNX1-203ENST00000553272 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
PCNX1-203ENST00000553272 MED14O60244 1454 aa12.97□□□□□ -0.33
PCNX1-203ENST00000553272 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
PCNX1-203ENST00000553272 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
PCNX1-203ENST00000553272 KIF3BO15066 747 aa12.97□□□□□ -0.33
PCNX1-203ENST00000553272 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
PCNX1-203ENST00000553272 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
PCNX1-203ENST00000553272 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
PCNX1-203ENST00000553272 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
PCNX1-203ENST00000553272 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
PCNX1-203ENST00000553272 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
PCNX1-203ENST00000553272 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
PCNX1-203ENST00000553272 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
PCNX1-203ENST00000553272 NLRP1Q9C000 1473 aa12.94□□□□□ -0.34
PCNX1-203ENST00000553272 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
PCNX1-203ENST00000553272 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
PCNX1-203ENST00000553272 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
PCNX1-203ENST00000553272 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
PCNX1-203ENST00000553272 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
PCNX1-203ENST00000553272 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
PCNX1-203ENST00000553272 CEP152O94986 1710 aa12.9□□□□□ -0.34
PCNX1-203ENST00000553272 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
PCNX1-203ENST00000553272 CAMSAP2Q08AD1 1489 aa12.87□□□□□ -0.35
PCNX1-203ENST00000553272 ARHGEF5Q12774 1597 aa12.85□□□□□ -0.35
PCNX1-203ENST00000553272 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
PCNX1-203ENST00000553272 ABCC3O15438 1527 aa12.84□□□□□ -0.35
PCNX1-203ENST00000553272 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
PCNX1-203ENST00000553272 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
PCNX1-203ENST00000553272 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
PCNX1-203ENST00000553272 LTKP29376 864 aa12.81□□□□□ -0.36
PCNX1-203ENST00000553272 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
PCNX1-203ENST00000553272 SCAF11Q99590 1463 aaKnown RBP12.8□□□□□ -0.36
PCNX1-203ENST00000553272 ARHGAP23Q9P227 1491 aa12.8□□□□□ -0.36
PCNX1-203ENST00000553272 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
PCNX1-203ENST00000553272 SLIT1O75093 1534 aa12.79□□□□□ -0.36
PCNX1-203ENST00000553272 MAST1Q9Y2H9 1570 aa12.79□□□□□ -0.36
PCNX1-203ENST00000553272 EIF2AK4Q9P2K8 1649 aaKnown RBP12.79□□□□□ -0.36
PCNX1-203ENST00000553272 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
PCNX1-203ENST00000553272 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
PCNX1-203ENST00000553272 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
PCNX1-203ENST00000553272 PIK3C2BO00750 1634 aa12.77□□□□□ -0.36
PCNX1-203ENST00000553272 LRP6O75581 1613 aa12.77□□□□□ -0.36
PCNX1-203ENST00000553272 COL16A1Q07092 1604 aaPredicted RBP12.77□□□□□ -0.36
PCNX1-203ENST00000553272 SRCAPQ6ZRS2 3230 aa12.77□□□□□ -0.37
PCNX1-203ENST00000553272 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
PCNX1-203ENST00000553272 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
PCNX1-203ENST00000553272 ARHGAP31Q2M1Z3 1444 aa12.75□□□□□ -0.37
PCNX1-203ENST00000553272 TMEM94Q12767 1356 aa12.74□□□□□ -0.37
PCNX1-203ENST00000553272 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
PCNX1-203ENST00000553272 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
PCNX1-203ENST00000553272 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
PCNX1-203ENST00000553272 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
PCNX1-203ENST00000553272 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
PCNX1-203ENST00000553272 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
PCNX1-203ENST00000553272 KDM5AP29375 1690 aaKnown RBP12.71□□□□□ -0.37
PCNX1-203ENST00000553272 KCNA6P17658 529 aa12.71□□□□□ -0.37
PCNX1-203ENST00000553272 NWD1Q149M9 1564 aa12.71□□□□□ -0.37
PCNX1-203ENST00000553272 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.38
PCNX1-203ENST00000553272 TET3O43151 1660 aa12.7□□□□□ -0.38
PCNX1-203ENST00000553272 MYOM3Q5VTT5 1437 aa12.69□□□□□ -0.38
PCNX1-203ENST00000553272 JCADQ9P266 1359 aa12.69□□□□□ -0.38
PCNX1-203ENST00000553272 IDI1Q13907 227 aa12.68□□□□□ -0.38
PCNX1-203ENST00000553272 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
PCNX1-203ENST00000553272 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
PCNX1-203ENST00000553272 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
PCNX1-203ENST00000553272 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
PCNX1-203ENST00000553272 ERBINQ96RT1 1412 aa12.67□□□□□ -0.38
PCNX1-203ENST00000553272 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
PCNX1-203ENST00000553272 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
PCNX1-203ENST00000553272 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
PCNX1-203ENST00000553272 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
PCNX1-203ENST00000553272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCNX1-203ENST00000553272 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
PCNX1-203ENST00000553272 SLAIN2Q9P270 581 aa12.65□□□□□ -0.38
PCNX1-203ENST00000553272 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
PCNX1-203ENST00000553272 ABCC5O15440 1437 aa12.64□□□□□ -0.39
PCNX1-203ENST00000553272 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms