RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
LINC02406-201ENST00000553029 DNMT1P26358 1616 aaKnown RBP10.68□□□□□ -0.7
LINC02406-201ENST00000553029 NPHP4O75161 1426 aaPredicted RBP10.67□□□□□ -0.7
LINC02406-201ENST00000553029 SUPT6HQ7KZ85 1726 aaKnown RBP10.67□□□□□ -0.7
LINC02406-201ENST00000553029 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
LINC02406-201ENST00000553029 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
LINC02406-201ENST00000553029 FAM135BQ49AJ0 1406 aa10.66□□□□□ -0.7
LINC02406-201ENST00000553029 SYNMO15061 1565 aa10.65□□□□□ -0.7
LINC02406-201ENST00000553029 MYO5CQ9NQX4 1742 aa10.65□□□□□ -0.7
LINC02406-201ENST00000553029 ATXN8OSP0DMR3 200 aa10.65□□□□□ -0.7
LINC02406-201ENST00000553029 MED14O60244 1454 aa10.64□□□□□ -0.71
LINC02406-201ENST00000553029 POLR1AO95602 1720 aaPredicted RBP10.64□□□□□ -0.71
LINC02406-201ENST00000553029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC02406-201ENST00000553029 ZNF772Q68DY9 489 aaPredicted RBP10.62□□□□□ -0.71
LINC02406-201ENST00000553029 CLTCQ00610 1675 aaKnown RBP10.62□□□□□ -0.71
LINC02406-201ENST00000553029 ABCC1P33527 1531 aa10.62□□□□□ -0.71
LINC02406-201ENST00000553029 TNRQ92752 1358 aa10.62□□□□□ -0.71
LINC02406-201ENST00000553029 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
LINC02406-201ENST00000553029 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
LINC02406-201ENST00000553029 KIF14Q15058 1648 aa10.61□□□□□ -0.71
LINC02406-201ENST00000553029 GGT6Q6P531 493 aa10.6□□□□□ -0.71
LINC02406-201ENST00000553029 THEMISQ8N1K5 641 aaPredicted RBP10.6□□□□□ -0.71
LINC02406-201ENST00000553029 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
LINC02406-201ENST00000553029 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
LINC02406-201ENST00000553029 JCADQ9P266 1359 aa10.58□□□□□ -0.72
LINC02406-201ENST00000553029 DEPDC5O75140 1603 aa10.58□□□□□ -0.72
LINC02406-201ENST00000553029 CLIP1P30622 1438 aa10.58□□□□□ -0.72
LINC02406-201ENST00000553029 TROQ12816 1431 aaPredicted RBP10.58□□□□□ -0.72
LINC02406-201ENST00000553029 CDK12Q9NYV4 1490 aaPredicted RBP10.57□□□□□ -0.72
LINC02406-201ENST00000553029 RXRBP28702 533 aa10.57□□□□□ -0.72
LINC02406-201ENST00000553029 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
LINC02406-201ENST00000553029 A2MP01023 1474 aa10.56□□□□□ -0.72
LINC02406-201ENST00000553029 MEX3CQ5U5Q3 659 aaKnown RBP10.56□□□□□ -0.72
LINC02406-201ENST00000553029 ZRANB1Q9UGI0 708 aa10.56□□□□□ -0.72
LINC02406-201ENST00000553029 IQGAP1P46940 1657 aa10.56□□□□□ -0.72
LINC02406-201ENST00000553029 SPAG9O60271 1321 aaKnown RBP10.56□□□□□ -0.72
LINC02406-201ENST00000553029 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
LINC02406-201ENST00000553029 UGGT1Q9NYU2 1555 aa10.55□□□□□ -0.72
LINC02406-201ENST00000553029 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
LINC02406-201ENST00000553029 STRCP1A6NGW2 1772 aa10.54□□□□□ -0.72
LINC02406-201ENST00000553029 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
LINC02406-201ENST00000553029 SAMD9LQ8IVG5 1584 aa10.54□□□□□ -0.72
LINC02406-201ENST00000553029 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
LINC02406-201ENST00000553029 KDM5DQ9BY66 1539 aa10.53□□□□□ -0.72
LINC02406-201ENST00000553029 CSRNP3Q8WYN3 585 aa10.53□□□□□ -0.72
LINC02406-201ENST00000553029 LRP6O75581 1613 aa10.53□□□□□ -0.72
LINC02406-201ENST00000553029 PZPP20742 1482 aa10.53□□□□□ -0.72
LINC02406-201ENST00000553029 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
LINC02406-201ENST00000553029 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
LINC02406-201ENST00000553029 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
LINC02406-201ENST00000553029 MIA2Q96PC5 1412 aa10.51□□□□□ -0.73
LINC02406-201ENST00000553029 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
LINC02406-201ENST00000553029 ATP7AQ04656 1500 aa10.51□□□□□ -0.73
LINC02406-201ENST00000553029 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
LINC02406-201ENST00000553029 PREX2Q70Z35 1606 aa10.5□□□□□ -0.73
LINC02406-201ENST00000553029 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
LINC02406-201ENST00000553029 FGD6Q6ZV73 1430 aa10.49□□□□□ -0.73
LINC02406-201ENST00000553029 CDC42BPBQ9Y5S2 1711 aa10.48□□□□□ -0.73
LINC02406-201ENST00000553029 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
LINC02406-201ENST00000553029 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
LINC02406-201ENST00000553029 NUTM2DQ5VT03 806 aaPredicted RBP10.48□□□□□ -0.73
LINC02406-201ENST00000553029 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
LINC02406-201ENST00000553029 RGS12O14924 1447 aa10.48□□□□□ -0.73
LINC02406-201ENST00000553029 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
LINC02406-201ENST00000553029 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
LINC02406-201ENST00000553029 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
LINC02406-201ENST00000553029 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
LINC02406-201ENST00000553029 ZBTB12Q9Y330 459 aaPredicted RBP10.46□□□□□ -0.73
LINC02406-201ENST00000553029 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
LINC02406-201ENST00000553029 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.74
LINC02406-201ENST00000553029 INO80Q9ULG1 1556 aaPredicted RBP10.46□□□□□ -0.74
LINC02406-201ENST00000553029 ZC3H13Q5T200 1668 aaKnown RBP10.45□□□□□ -0.74
LINC02406-201ENST00000553029 MAP3K1Q13233 1512 aa10.45□□□□□ -0.74
LINC02406-201ENST00000553029 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC02406-201ENST00000553029 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
LINC02406-201ENST00000553029 KIAA1107Q9UPP5 1409 aa10.43□□□□□ -0.74
LINC02406-201ENST00000553029 AFF2P51816 1311 aa10.43□□□□□ -0.74
LINC02406-201ENST00000553029 WASHC2CQ9Y4E1 1318 aa10.43□□□□□ -0.74
LINC02406-201ENST00000553029 RBM6P78332 1123 aaKnown RBP10.43□□□□□ -0.74
LINC02406-201ENST00000553029 PHLPP1O60346 1717 aa10.43□□□□□ -0.74
LINC02406-201ENST00000553029 COL16A1Q07092 1604 aaPredicted RBP10.43□□□□□ -0.74
LINC02406-201ENST00000553029 MSH6P52701 1360 aa10.42□□□□□ -0.74
LINC02406-201ENST00000553029 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
LINC02406-201ENST00000553029 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
LINC02406-201ENST00000553029 TXNDC2Q86VQ3 553 aa10.41□□□□□ -0.74
LINC02406-201ENST00000553029 PROSER2Q86WR7 435 aaPredicted RBP10.41□□□□□ -0.74
LINC02406-201ENST00000553029 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
LINC02406-201ENST00000553029 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
LINC02406-201ENST00000553029 KIF3BO15066 747 aa10.4□□□□□ -0.74
LINC02406-201ENST00000553029 LTKP29376 864 aa10.4□□□□□ -0.74
LINC02406-201ENST00000553029 KCNA6P17658 529 aa10.39□□□□□ -0.75
LINC02406-201ENST00000553029 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
LINC02406-201ENST00000553029 ARHGAP23Q9P227 1491 aa10.38□□□□□ -0.75
LINC02406-201ENST00000553029 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
LINC02406-201ENST00000553029 EID1Q9Y6B2 187 aa10.38□□□□□ -0.75
LINC02406-201ENST00000553029 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
LINC02406-201ENST00000553029 NKTRP30414 1462 aaKnown RBP10.37□□□□□ -0.75
LINC02406-201ENST00000553029 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
LINC02406-201ENST00000553029 TIAM1Q13009 1591 aa10.37□□□□□ -0.75
LINC02406-201ENST00000553029 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms