RNA–Protein interactions for RNA: ENST00000552763.1

MMP19-208, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-208ENST00000552763 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
MMP19-208ENST00000552763 CNTLNQ9NXG0 1405 aa29.22■■■□□ 2.27
MMP19-208ENST00000552763 EIF2AK4Q9P2K8 1649 aaKnown RBP29.21■■■□□ 2.27
MMP19-208ENST00000552763 CEBPAP49715 358 aaPredicted RBP29.21■■■□□ 2.27
MMP19-208ENST00000552763 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.26
MMP19-208ENST00000552763 WASHC2CQ9Y4E1 1318 aa29.19■■■□□ 2.26
MMP19-208ENST00000552763 ZMYM3Q14202 1370 aa29.16■■■□□ 2.26
MMP19-208ENST00000552763 RNF17Q9BXT8 1623 aaKnown RBP29.16■■■□□ 2.26
MMP19-208ENST00000552763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
MMP19-208ENST00000552763 CLTCQ00610 1675 aaKnown RBP29.11■■■□□ 2.25
MMP19-208ENST00000552763 KDM5DQ9BY66 1539 aa29.1■■■□□ 2.25
MMP19-208ENST00000552763 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
MMP19-208ENST00000552763 MROH1Q8NDA8 1641 aa29.09■■■□□ 2.25
MMP19-208ENST00000552763 MROH2AA6NES4 1674 aa29.07■■■□□ 2.24
MMP19-208ENST00000552763 KANK1Q14678 1352 aa29.07■■■□□ 2.24
MMP19-208ENST00000552763 NAIPQ13075 1403 aa29.06■■■□□ 2.24
MMP19-208ENST00000552763 C3P01024 1663 aa29.05■■■□□ 2.24
MMP19-208ENST00000552763 DEPDC5O75140 1603 aa29.05■■■□□ 2.24
MMP19-208ENST00000552763 ABCC3O15438 1527 aa29.04■■■□□ 2.24
MMP19-208ENST00000552763 PRDM15P57071 1507 aaPredicted RBP29.04■■■□□ 2.24
MMP19-208ENST00000552763 HFM1A2PYH4 1435 aa29.03■■■□□ 2.24
MMP19-208ENST00000552763 FBXO31Q5XUX0 539 aaPredicted RBP28.99■■■□□ 2.23
MMP19-208ENST00000552763 NPATQ14207 1427 aa28.99■■■□□ 2.23
MMP19-208ENST00000552763 VWDEQ8N2E2 1590 aa28.97■■■□□ 2.23
MMP19-208ENST00000552763 ZC3H13Q5T200 1668 aaKnown RBP28.97■■■□□ 2.23
MMP19-208ENST00000552763 PZPP20742 1482 aa28.96■■■□□ 2.23
MMP19-208ENST00000552763 NUP155O75694 1391 aa28.94■■■□□ 2.22
MMP19-208ENST00000552763 CEP152O94986 1710 aa28.94■■■□□ 2.22
MMP19-208ENST00000552763 LMTK2Q8IWU2 1503 aa28.94■■■□□ 2.22
MMP19-208ENST00000552763 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
MMP19-208ENST00000552763 UNC13BO14795 1591 aa28.92■■■□□ 2.22
MMP19-208ENST00000552763 ARHGAP31Q2M1Z3 1444 aa28.92■■■□□ 2.22
MMP19-208ENST00000552763 GCC2Q8IWJ2 1684 aa28.92■■■□□ 2.22
MMP19-208ENST00000552763 CAMSAP1Q5T5Y3 1602 aa28.9■■■□□ 2.22
MMP19-208ENST00000552763 UHRF1BP1Q6BDS2 1440 aa28.88■■■□□ 2.21
MMP19-208ENST00000552763 LMTK3Q96Q04 1460 aa28.88■■■□□ 2.21
MMP19-208ENST00000552763 TNRQ92752 1358 aa28.88■■■□□ 2.21
MMP19-208ENST00000552763 TRIM52Q96A61 297 aa28.86■■■□□ 2.21
MMP19-208ENST00000552763 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
MMP19-208ENST00000552763 PREX1Q8TCU6 1659 aa28.84■■■□□ 2.21
MMP19-208ENST00000552763 ERVK-7P63135 1459 aa28.83■■■□□ 2.21
MMP19-208ENST00000552763 HSPA2P54652 639 aa28.82■■■□□ 2.2
MMP19-208ENST00000552763 IQGAP3Q86VI3 1631 aa28.81■■■□□ 2.2
MMP19-208ENST00000552763 EFCAB6Q5THR3 1501 aa28.81■■■□□ 2.2
MMP19-208ENST00000552763 SPATA31D1Q6ZQQ2 1576 aa28.79■■■□□ 2.2
MMP19-208ENST00000552763 TET3O43151 1660 aa28.78■■■□□ 2.2
MMP19-208ENST00000552763 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
MMP19-208ENST00000552763 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
MMP19-208ENST00000552763 ACIN1Q9UKV3 1341 aaKnown RBP28.75■■■□□ 2.19
MMP19-208ENST00000552763 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
MMP19-208ENST00000552763 NLRP1Q9C000 1473 aa28.73■■■□□ 2.19
MMP19-208ENST00000552763 MYO3AQ8NEV4 1616 aa28.73■■■□□ 2.19
MMP19-208ENST00000552763 NOS1P29475 1434 aa28.73■■■□□ 2.19
MMP19-208ENST00000552763 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
MMP19-208ENST00000552763 TRIM26Q12899 539 aaPredicted RBP28.72■■■□□ 2.19
MMP19-208ENST00000552763 SLC4A1APQ9BWU0 796 aaKnown RBP28.72■■■□□ 2.19
MMP19-208ENST00000552763 HRCP23327 699 aa28.7■■■□□ 2.18
MMP19-208ENST00000552763 CEP170BQ9Y4F5 1589 aaPredicted RBP28.7■■■□□ 2.18
MMP19-208ENST00000552763 E9PCH4 1651 aa28.68■■■□□ 2.18
MMP19-208ENST00000552763 PKD2Q13563 968 aa28.68■■■□□ 2.18
MMP19-208ENST00000552763 IDI1Q13907 227 aa28.68■■■□□ 2.18
MMP19-208ENST00000552763 SLC52A1Q9NWF4 448 aa28.67■■■□□ 2.18
MMP19-208ENST00000552763 THEMISQ8N1K5 641 aaPredicted RBP28.66■■■□□ 2.18
MMP19-208ENST00000552763 MPHOSPH9Q99550 1183 aa28.66■■■□□ 2.18
MMP19-208ENST00000552763 ZNF142P52746 1687 aaPredicted RBP28.66■■■□□ 2.18
MMP19-208ENST00000552763 SYNMO15061 1565 aa28.64■■■□□ 2.18
MMP19-208ENST00000552763 UGGT1Q9NYU2 1555 aa28.62■■■□□ 2.17
MMP19-208ENST00000552763 STAG3Q9UJ98 1225 aa28.6■■■□□ 2.17
MMP19-208ENST00000552763 PTPRTO14522 1441 aa28.6■■■□□ 2.17
MMP19-208ENST00000552763 FOXD1Q16676 465 aa28.57■■■□□ 2.16
MMP19-208ENST00000552763 NCKAP5LQ9HCH0 1330 aa28.56■■■□□ 2.16
MMP19-208ENST00000552763 PLA2R1Q13018 1463 aa28.55■■■□□ 2.16
MMP19-208ENST00000552763 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
MMP19-208ENST00000552763 ANKLE2Q86XL3 938 aa28.52■■■□□ 2.16
MMP19-208ENST00000552763 DMRT2Q9Y5R5 561 aa28.52■■■□□ 2.16
MMP19-208ENST00000552763 UBR1Q8IWV7 1749 aa28.51■■■□□ 2.15
MMP19-208ENST00000552763 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
MMP19-208ENST00000552763 CHGAP10645 457 aaKnown RBP28.5■■■□□ 2.15
MMP19-208ENST00000552763 SPHKAPQ2M3C7 1700 aa28.49■■■□□ 2.15
MMP19-208ENST00000552763 ADGRB3O60242 1522 aa28.46■■■□□ 2.15
MMP19-208ENST00000552763 TRPM2O94759 1503 aa28.46■■■□□ 2.15
MMP19-208ENST00000552763 TMEM2Q9UHN6 1383 aa28.46■■■□□ 2.15
MMP19-208ENST00000552763 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.14
MMP19-208ENST00000552763 TXNDC2Q86VQ3 553 aa28.44■■■□□ 2.14
MMP19-208ENST00000552763 ARHGAP23Q9P227 1491 aa28.44■■■□□ 2.14
MMP19-208ENST00000552763 LTKP29376 864 aa28.43■■■□□ 2.14
MMP19-208ENST00000552763 EID1Q9Y6B2 187 aa28.43■■■□□ 2.14
MMP19-208ENST00000552763 SLIT1O75093 1534 aa28.43■■■□□ 2.14
MMP19-208ENST00000552763 TMEM131LA2VDJ0 1609 aa28.41■■■□□ 2.14
MMP19-208ENST00000552763 CLTCL1P53675 1640 aa28.39■■■□□ 2.13
MMP19-208ENST00000552763 HDGFP51858 240 aaKnown RBP28.37■■■□□ 2.13
MMP19-208ENST00000552763 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
MMP19-208ENST00000552763 CCDC144AA2RUR9 1427 aa28.35■■■□□ 2.13
MMP19-208ENST00000552763 MED14O60244 1454 aa28.35■■■□□ 2.13
MMP19-208ENST00000552763 ZNF326Q5BKZ1 582 aaKnown RBP28.35■■■□□ 2.13
MMP19-208ENST00000552763 NPHP4O75161 1426 aaPredicted RBP28.35■■■□□ 2.13
MMP19-208ENST00000552763 RIMS2Q9UQ26 1411 aa28.35■■■□□ 2.13
MMP19-208ENST00000552763 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
MMP19-208ENST00000552763 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.33■■■□□ 2.13
MMP19-208ENST00000552763 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms