RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 ROCK1Q13464 1354 aa10.39□□□□□ -0.75
SYT1-212ENST00000552744 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
SYT1-212ENST00000552744 MYBBP1AQ9BQG0 1328 aaKnown RBP10.37□□□□□ -0.75
SYT1-212ENST00000552744 CC2D1BQ5T0F9 858 aaKnown RBP10.37□□□□□ -0.75
SYT1-212ENST00000552744 IQGAP2Q13576 1575 aa10.37□□□□□ -0.75
SYT1-212ENST00000552744 PZPP20742 1482 aa10.37□□□□□ -0.75
SYT1-212ENST00000552744 TCERG1O14776 1098 aaKnown RBP10.36□□□□□ -0.75
SYT1-212ENST00000552744 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
SYT1-212ENST00000552744 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
SYT1-212ENST00000552744 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
SYT1-212ENST00000552744 NUP155O75694 1391 aa10.36□□□□□ -0.75
SYT1-212ENST00000552744 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
SYT1-212ENST00000552744 KIAA1107Q9UPP5 1409 aa10.35□□□□□ -0.75
SYT1-212ENST00000552744 BACH2Q9BYV9 841 aa10.35□□□□□ -0.75
SYT1-212ENST00000552744 DNMT1P26358 1616 aaKnown RBP10.34□□□□□ -0.75
SYT1-212ENST00000552744 NUP160Q12769 1436 aa10.34□□□□□ -0.75
SYT1-212ENST00000552744 FBLN2P98095 1184 aa10.34□□□□□ -0.75
SYT1-212ENST00000552744 RALBP1Q15311 655 aa10.34□□□□□ -0.75
SYT1-212ENST00000552744 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
SYT1-212ENST00000552744 CRBNQ96SW2 442 aa10.33□□□□□ -0.76
SYT1-212ENST00000552744 BRD4O60885 1362 aaPredicted RBP10.33□□□□□ -0.76
SYT1-212ENST00000552744 ARID4BQ4LE39 1312 aaPredicted RBP10.32□□□□□ -0.76
SYT1-212ENST00000552744 NLRP13Q86W25 1043 aa10.32□□□□□ -0.76
SYT1-212ENST00000552744 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
SYT1-212ENST00000552744 LRPPRCP42704 1394 aaKnown RBP10.32□□□□□ -0.76
SYT1-212ENST00000552744 KDM5CP41229 1560 aa10.31□□□□□ -0.76
SYT1-212ENST00000552744 CAMSAP2Q08AD1 1489 aa10.31□□□□□ -0.76
SYT1-212ENST00000552744 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.31□□□□□ -0.76
SYT1-212ENST00000552744 ANKRD50Q9ULJ7 1429 aa10.31□□□□□ -0.76
SYT1-212ENST00000552744 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
SYT1-212ENST00000552744 ANKRD30AQ9BXX3 1397 aa10.31□□□□□ -0.76
SYT1-212ENST00000552744 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
SYT1-212ENST00000552744 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
SYT1-212ENST00000552744 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
SYT1-212ENST00000552744 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
SYT1-212ENST00000552744 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
SYT1-212ENST00000552744 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
SYT1-212ENST00000552744 C20orf194Q5TEA3 1177 aa10.3□□□□□ -0.76
SYT1-212ENST00000552744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
SYT1-212ENST00000552744 KIF14Q15058 1648 aa10.29□□□□□ -0.76
SYT1-212ENST00000552744 HNRNPMP52272 730 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYT1-212ENST00000552744 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
SYT1-212ENST00000552744 PPM1GO15355 546 aaPredicted RBP10.28□□□□□ -0.76
SYT1-212ENST00000552744 MS4A1P11836 297 aa10.28□□□□□ -0.76
SYT1-212ENST00000552744 PDE3BQ13370 1112 aa10.27□□□□□ -0.76
SYT1-212ENST00000552744 PANK3Q9H999 370 aa10.27□□□□□ -0.77
SYT1-212ENST00000552744 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.77
SYT1-212ENST00000552744 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
SYT1-212ENST00000552744 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
SYT1-212ENST00000552744 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
SYT1-212ENST00000552744 RGS3P49796 1198 aa10.26□□□□□ -0.77
SYT1-212ENST00000552744 TROQ12816 1431 aaPredicted RBP10.26□□□□□ -0.77
SYT1-212ENST00000552744 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
SYT1-212ENST00000552744 HOXD11P31277 338 aaPredicted RBP10.26□□□□□ -0.77
SYT1-212ENST00000552744 DISP1Q96F81 1524 aa10.25□□□□□ -0.77
SYT1-212ENST00000552744 KIAA0586Q9BVV6 1533 aa10.25□□□□□ -0.77
SYT1-212ENST00000552744 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
SYT1-212ENST00000552744 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
SYT1-212ENST00000552744 NFKBIBQ15653 356 aa10.24□□□□□ -0.77
SYT1-212ENST00000552744 DDRGK1Q96HY6 314 aa10.24□□□□□ -0.77
SYT1-212ENST00000552744 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
SYT1-212ENST00000552744 RAPGEF6Q8TEU7 1601 aa10.24□□□□□ -0.77
SYT1-212ENST00000552744 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
SYT1-212ENST00000552744 CHMP7Q8WUX9 453 aaPredicted RBP10.24□□□□□ -0.77
SYT1-212ENST00000552744 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
SYT1-212ENST00000552744 KIF13AQ9H1H9 1805 aa10.23□□□□□ -0.77
SYT1-212ENST00000552744 PARD3Q8TEW0 1356 aa10.23□□□□□ -0.77
SYT1-212ENST00000552744 GSE1Q14687 1217 aa10.23□□□□□ -0.77
SYT1-212ENST00000552744 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
SYT1-212ENST00000552744 KIAA0556O60303 1618 aa10.23□□□□□ -0.77
SYT1-212ENST00000552744 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
SYT1-212ENST00000552744 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.77
SYT1-212ENST00000552744 WDR43Q15061 677 aaKnown RBP eCLIP10.21□□□□□ -0.78
SYT1-212ENST00000552744 FRAT1Q92837 279 aaPredicted RBP10.21□□□□□ -0.78
SYT1-212ENST00000552744 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
SYT1-212ENST00000552744 ADGBQ8N7X0 1667 aa10.2□□□□□ -0.78
SYT1-212ENST00000552744 EIF5BO60841 1220 aaKnown RBP10.2□□□□□ -0.78
SYT1-212ENST00000552744 CCDC146Q8IYE0 955 aa10.2□□□□□ -0.78
SYT1-212ENST00000552744 CCDC144AA2RUR9 1427 aa10.19□□□□□ -0.78
SYT1-212ENST00000552744 ADGRL2O95490 1459 aa10.19□□□□□ -0.78
SYT1-212ENST00000552744 FRAT2O75474 233 aaPredicted RBP10.19□□□□□ -0.78
SYT1-212ENST00000552744 TMF1P82094 1093 aa10.19□□□□□ -0.78
SYT1-212ENST00000552744 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
SYT1-212ENST00000552744 WASHC2CQ9Y4E1 1318 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 CENPQQ7L2Z9 268 aaPredicted RBP10.18□□□□□ -0.78
SYT1-212ENST00000552744 TESK2Q96S53 571 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 KNSTRNQ9Y448 316 aa10.18□□□□□ -0.78
SYT1-212ENST00000552744 ARHGEF12Q9NZN5 1544 aa10.17□□□□□ -0.78
SYT1-212ENST00000552744 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 DUSP27Q5VZP5 1158 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 KDM2BQ8NHM5 1336 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 PLEKHH1Q9ULM0 1364 aa10.16□□□□□ -0.78
SYT1-212ENST00000552744 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.78
SYT1-212ENST00000552744 BCAR3O75815 825 aa10.14□□□□□ -0.79
SYT1-212ENST00000552744 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms