RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
GNPTAB-210ENST00000552681 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
GNPTAB-210ENST00000552681 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
GNPTAB-210ENST00000552681 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
GNPTAB-210ENST00000552681 MCCP23508 829 aa11.83□□□□□ -0.52
GNPTAB-210ENST00000552681 APBB1IPQ7Z5R6 666 aaPredicted RBP11.83□□□□□ -0.52
GNPTAB-210ENST00000552681 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
GNPTAB-210ENST00000552681 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
GNPTAB-210ENST00000552681 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
GNPTAB-210ENST00000552681 PATL2C9JE40 543 aaKnown RBP11.81□□□□□ -0.52
GNPTAB-210ENST00000552681 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
GNPTAB-210ENST00000552681 PEX14O75381 377 aa11.8□□□□□ -0.52
GNPTAB-210ENST00000552681 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
GNPTAB-210ENST00000552681 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
GNPTAB-210ENST00000552681 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
GNPTAB-210ENST00000552681 EVI5LQ96CN4 794 aa11.77□□□□□ -0.52
GNPTAB-210ENST00000552681 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
GNPTAB-210ENST00000552681 TERF2IPQ9NYB0 399 aa11.76□□□□□ -0.53
GNPTAB-210ENST00000552681 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
GNPTAB-210ENST00000552681 TCF3P15923 654 aa11.75□□□□□ -0.53
GNPTAB-210ENST00000552681 TXNDC2Q86VQ3 553 aa11.75□□□□□ -0.53
GNPTAB-210ENST00000552681 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
GNPTAB-210ENST00000552681 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
GNPTAB-210ENST00000552681 MIER1Q8N108 512 aa11.74□□□□□ -0.53
GNPTAB-210ENST00000552681 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
GNPTAB-210ENST00000552681 GPIHBP1Q8IV16 184 aa11.73□□□□□ -0.53
GNPTAB-210ENST00000552681 KLHL42Q9P2K6 505 aa11.73□□□□□ -0.53
GNPTAB-210ENST00000552681 RALBP1Q15311 655 aa11.72□□□□□ -0.53
GNPTAB-210ENST00000552681 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
GNPTAB-210ENST00000552681 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
GNPTAB-210ENST00000552681 E2F4Q16254 413 aa11.71□□□□□ -0.53
GNPTAB-210ENST00000552681 NME8Q8N427 588 aa11.71□□□□□ -0.53
GNPTAB-210ENST00000552681 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
GNPTAB-210ENST00000552681 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
GNPTAB-210ENST00000552681 UBXN4Q92575 508 aa11.7□□□□□ -0.54
GNPTAB-210ENST00000552681 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
GNPTAB-210ENST00000552681 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
GNPTAB-210ENST00000552681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
GNPTAB-210ENST00000552681 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
GNPTAB-210ENST00000552681 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
GNPTAB-210ENST00000552681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.54
GNPTAB-210ENST00000552681 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
GNPTAB-210ENST00000552681 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
GNPTAB-210ENST00000552681 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
GNPTAB-210ENST00000552681 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
GNPTAB-210ENST00000552681 C8orf37Q96NL8 207 aa11.65□□□□□ -0.54
GNPTAB-210ENST00000552681 FOXD4Q12950 439 aaPredicted RBP11.65□□□□□ -0.55
GNPTAB-210ENST00000552681 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
GNPTAB-210ENST00000552681 NEFMP07197 916 aa11.64□□□□□ -0.55
GNPTAB-210ENST00000552681 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.64□□□□□ -0.55
GNPTAB-210ENST00000552681 PPFIA4O75335 1185 aa11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 PARP9Q8IXQ6 854 aa11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
GNPTAB-210ENST00000552681 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
GNPTAB-210ENST00000552681 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
GNPTAB-210ENST00000552681 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
GNPTAB-210ENST00000552681 PARNO95453 639 aaKnown RBP11.61□□□□□ -0.55
GNPTAB-210ENST00000552681 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
GNPTAB-210ENST00000552681 NAALADL2Q58DX5 795 aa11.6□□□□□ -0.55
GNPTAB-210ENST00000552681 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.55
GNPTAB-210ENST00000552681 RPS6KL1Q9Y6S9 549 aa11.58□□□□□ -0.55
GNPTAB-210ENST00000552681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 RFX1P22670 979 aa11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 PAX3P23760 479 aa11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 MCCD1P59942 119 aaPredicted RBP11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 IPO4Q8TEX9 1081 aaKnown RBP11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 SBNO2Q9Y2G9 1366 aa11.58□□□□□ -0.56
GNPTAB-210ENST00000552681 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
GNPTAB-210ENST00000552681 PNMA2Q9UL42 364 aa11.57□□□□□ -0.56
GNPTAB-210ENST00000552681 USTQ9Y2C2 406 aa11.57□□□□□ -0.56
GNPTAB-210ENST00000552681 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
GNPTAB-210ENST00000552681 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
GNPTAB-210ENST00000552681 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
GNPTAB-210ENST00000552681 CREB3O43889 395 aa11.56□□□□□ -0.56
GNPTAB-210ENST00000552681 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
GNPTAB-210ENST00000552681 PMM1Q92871 262 aa11.55□□□□□ -0.56
GNPTAB-210ENST00000552681 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
GNPTAB-210ENST00000552681 FAM193AP78312 1265 aa11.54□□□□□ -0.56
GNPTAB-210ENST00000552681 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
GNPTAB-210ENST00000552681 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
GNPTAB-210ENST00000552681 TBC1D12O60347 775 aa11.53□□□□□ -0.56
GNPTAB-210ENST00000552681 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
GNPTAB-210ENST00000552681 DNAJC14Q6Y2X3 702 aaPredicted RBP11.53□□□□□ -0.56
GNPTAB-210ENST00000552681 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
GNPTAB-210ENST00000552681 ZFYVE27Q5T4F4 411 aa11.52□□□□□ -0.56
GNPTAB-210ENST00000552681 MTA3Q9BTC8 594 aa11.52□□□□□ -0.56
GNPTAB-210ENST00000552681 GIPC2Q8TF65 315 aa11.52□□□□□ -0.57
GNPTAB-210ENST00000552681 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
GNPTAB-210ENST00000552681 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 FTSJ3Q8IY81 847 aaKnown RBP11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 SMC5Q8IY18 1101 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 UBA5Q9GZZ9 404 aa11.51□□□□□ -0.57
GNPTAB-210ENST00000552681 CHMP4BQ9H444 224 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms