RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
RNF41-211ENST00000552656 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
RNF41-211ENST00000552656 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
RNF41-211ENST00000552656 HSPA1LP34931 641 aa17.11■□□□□ 0.33
RNF41-211ENST00000552656 TNRQ92752 1358 aa17.11■□□□□ 0.33
RNF41-211ENST00000552656 PZPP20742 1482 aa17.1■□□□□ 0.33
RNF41-211ENST00000552656 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
RNF41-211ENST00000552656 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
RNF41-211ENST00000552656 KIF3BO15066 747 aa17.09■□□□□ 0.33
RNF41-211ENST00000552656 CEP162Q5TB80 1403 aa17.09■□□□□ 0.33
RNF41-211ENST00000552656 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
RNF41-211ENST00000552656 CPS1P31327 1500 aa17.08■□□□□ 0.32
RNF41-211ENST00000552656 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
RNF41-211ENST00000552656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.32
RNF41-211ENST00000552656 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
RNF41-211ENST00000552656 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
RNF41-211ENST00000552656 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
RNF41-211ENST00000552656 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
RNF41-211ENST00000552656 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
RNF41-211ENST00000552656 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
RNF41-211ENST00000552656 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
RNF41-211ENST00000552656 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
RNF41-211ENST00000552656 UGGT1Q9NYU2 1555 aa17.03■□□□□ 0.32
RNF41-211ENST00000552656 TOM1O60784 492 aa17.03■□□□□ 0.32
RNF41-211ENST00000552656 MED14O60244 1454 aa17.03■□□□□ 0.32
RNF41-211ENST00000552656 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
RNF41-211ENST00000552656 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
RNF41-211ENST00000552656 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
RNF41-211ENST00000552656 ANKLE2Q86XL3 938 aa17.01■□□□□ 0.31
RNF41-211ENST00000552656 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
RNF41-211ENST00000552656 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
RNF41-211ENST00000552656 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
RNF41-211ENST00000552656 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
RNF41-211ENST00000552656 ABCC3O15438 1527 aa16.97■□□□□ 0.31
RNF41-211ENST00000552656 MROH1Q8NDA8 1641 aa16.97■□□□□ 0.31
RNF41-211ENST00000552656 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
RNF41-211ENST00000552656 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
RNF41-211ENST00000552656 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.31
RNF41-211ENST00000552656 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
RNF41-211ENST00000552656 CEP152O94986 1710 aa16.95■□□□□ 0.3
RNF41-211ENST00000552656 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
RNF41-211ENST00000552656 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
RNF41-211ENST00000552656 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
RNF41-211ENST00000552656 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
RNF41-211ENST00000552656 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
RNF41-211ENST00000552656 SYNMO15061 1565 aa16.92■□□□□ 0.3
RNF41-211ENST00000552656 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
RNF41-211ENST00000552656 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
RNF41-211ENST00000552656 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
RNF41-211ENST00000552656 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
RNF41-211ENST00000552656 LTKP29376 864 aa16.86■□□□□ 0.29
RNF41-211ENST00000552656 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
RNF41-211ENST00000552656 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
RNF41-211ENST00000552656 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
RNF41-211ENST00000552656 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
RNF41-211ENST00000552656 SLIT1O75093 1534 aa16.85■□□□□ 0.29
RNF41-211ENST00000552656 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
RNF41-211ENST00000552656 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
RNF41-211ENST00000552656 DUOX2Q9NRD8 1548 aa16.81■□□□□ 0.28
RNF41-211ENST00000552656 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
RNF41-211ENST00000552656 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
RNF41-211ENST00000552656 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
RNF41-211ENST00000552656 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
RNF41-211ENST00000552656 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
RNF41-211ENST00000552656 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
RNF41-211ENST00000552656 ABCC5O15440 1437 aa16.75■□□□□ 0.27
RNF41-211ENST00000552656 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
RNF41-211ENST00000552656 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
RNF41-211ENST00000552656 TET3O43151 1660 aa16.74■□□□□ 0.27
RNF41-211ENST00000552656 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
RNF41-211ENST00000552656 FAM135BQ49AJ0 1406 aa16.73■□□□□ 0.27
RNF41-211ENST00000552656 ERBINQ96RT1 1412 aa16.73■□□□□ 0.27
RNF41-211ENST00000552656 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
RNF41-211ENST00000552656 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
RNF41-211ENST00000552656 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
RNF41-211ENST00000552656 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
RNF41-211ENST00000552656 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
RNF41-211ENST00000552656 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
RNF41-211ENST00000552656 RBM33Q96EV2 1170 aaKnown RBP16.72■□□□□ 0.27
RNF41-211ENST00000552656 TMEM94Q12767 1356 aa16.72■□□□□ 0.27
RNF41-211ENST00000552656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
RNF41-211ENST00000552656 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
RNF41-211ENST00000552656 IDI1Q13907 227 aa16.7■□□□□ 0.26
RNF41-211ENST00000552656 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
RNF41-211ENST00000552656 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
RNF41-211ENST00000552656 LMTK2Q8IWU2 1503 aa16.69■□□□□ 0.26
RNF41-211ENST00000552656 DAPK1P53355 1430 aa16.69■□□□□ 0.26
RNF41-211ENST00000552656 KCNA6P17658 529 aa16.67■□□□□ 0.26
RNF41-211ENST00000552656 NWD1Q149M9 1564 aa16.67■□□□□ 0.26
RNF41-211ENST00000552656 NOS1P29475 1434 aa16.66■□□□□ 0.26
RNF41-211ENST00000552656 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
RNF41-211ENST00000552656 SETD1AO15047 1707 aaKnown RBP16.65■□□□□ 0.26
RNF41-211ENST00000552656 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
RNF41-211ENST00000552656 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
RNF41-211ENST00000552656 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
RNF41-211ENST00000552656 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
RNF41-211ENST00000552656 KANK1Q14678 1352 aa16.63■□□□□ 0.25
RNF41-211ENST00000552656 CHD2O14647 1828 aaKnown RBP16.62■□□□□ 0.25
RNF41-211ENST00000552656 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
RNF41-211ENST00000552656 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms