RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 GLI2P10070 1586 aa15.16■□□□□ 0.02
TUBA1C-209ENST00000552448 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
TUBA1C-209ENST00000552448 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
TUBA1C-209ENST00000552448 NUP155O75694 1391 aa15.16■□□□□ 0.02
TUBA1C-209ENST00000552448 ERBINQ96RT1 1412 aa15.16■□□□□ 0.02
TUBA1C-209ENST00000552448 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
TUBA1C-209ENST00000552448 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
TUBA1C-209ENST00000552448 UNC13BO14795 1591 aa15.15■□□□□ 0.02
TUBA1C-209ENST00000552448 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
TUBA1C-209ENST00000552448 ZFYVE16Q7Z3T8 1539 aa15.14■□□□□ 0.01
TUBA1C-209ENST00000552448 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
TUBA1C-209ENST00000552448 MAP3K4Q9Y6R4 1608 aa15.13■□□□□ 0.01
TUBA1C-209ENST00000552448 NEO1Q92859 1461 aa15.13■□□□□ 0.01
TUBA1C-209ENST00000552448 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
TUBA1C-209ENST00000552448 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
TUBA1C-209ENST00000552448 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
TUBA1C-209ENST00000552448 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
TUBA1C-209ENST00000552448 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
TUBA1C-209ENST00000552448 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
TUBA1C-209ENST00000552448 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
TUBA1C-209ENST00000552448 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
TUBA1C-209ENST00000552448 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0.01
TUBA1C-209ENST00000552448 KDM5CP41229 1560 aa15.08■□□□□ 0
TUBA1C-209ENST00000552448 EIF2AK4Q9P2K8 1649 aaKnown RBP15.07■□□□□ 0
TUBA1C-209ENST00000552448 DIP2BQ9P265 1576 aa15.07■□□□□ 0
TUBA1C-209ENST00000552448 FAM135AQ9P2D6 1515 aa15.07■□□□□ 0
TUBA1C-209ENST00000552448 POGZQ7Z3K3 1410 aa15.06■□□□□ 0
TUBA1C-209ENST00000552448 AFAP1Q8N556 730 aa15.06■□□□□ 0
TUBA1C-209ENST00000552448 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
TUBA1C-209ENST00000552448 DEPDC5O75140 1603 aa15.05■□□□□ -0
TUBA1C-209ENST00000552448 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
TUBA1C-209ENST00000552448 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
TUBA1C-209ENST00000552448 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
TUBA1C-209ENST00000552448 MLH3Q9UHC1 1453 aa15.04■□□□□ -0
TUBA1C-209ENST00000552448 CCDC7Q96M83 1385 aa15.04■□□□□ -0
TUBA1C-209ENST00000552448 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
TUBA1C-209ENST00000552448 DHX29Q7Z478 1369 aaKnown RBP15□□□□□ -0.01
TUBA1C-209ENST00000552448 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
TUBA1C-209ENST00000552448 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
TUBA1C-209ENST00000552448 RICTORQ6R327 1708 aa15□□□□□ -0.01
TUBA1C-209ENST00000552448 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
TUBA1C-209ENST00000552448 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
TUBA1C-209ENST00000552448 RALGAPBQ86X10 1494 aa14.98□□□□□ -0.01
TUBA1C-209ENST00000552448 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
TUBA1C-209ENST00000552448 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
TUBA1C-209ENST00000552448 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
TUBA1C-209ENST00000552448 A2MP01023 1474 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 KANK1Q14678 1352 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 KIF7Q2M1P5 1343 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 VWDEQ8N2E2 1590 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 USP47Q96K76 1375 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 ATP10AO60312 1499 aa14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
TUBA1C-209ENST00000552448 KIF13AQ9H1H9 1805 aa14.95□□□□□ -0.02
TUBA1C-209ENST00000552448 TET3O43151 1660 aa14.95□□□□□ -0.02
TUBA1C-209ENST00000552448 CCDC144AA2RUR9 1427 aa14.95□□□□□ -0.02
TUBA1C-209ENST00000552448 ABCA6Q8N139 1617 aa14.94□□□□□ -0.02
TUBA1C-209ENST00000552448 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
TUBA1C-209ENST00000552448 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
TUBA1C-209ENST00000552448 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
TUBA1C-209ENST00000552448 MROH1Q8NDA8 1641 aa14.92□□□□□ -0.02
TUBA1C-209ENST00000552448 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
TUBA1C-209ENST00000552448 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
TUBA1C-209ENST00000552448 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
TUBA1C-209ENST00000552448 E9PCH4 1651 aa14.91□□□□□ -0.02
TUBA1C-209ENST00000552448 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
TUBA1C-209ENST00000552448 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
TUBA1C-209ENST00000552448 LMTK2Q8IWU2 1503 aa14.9□□□□□ -0.02
TUBA1C-209ENST00000552448 KIF3BO15066 747 aa14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 CARD11Q9BXL7 1154 aa14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
TUBA1C-209ENST00000552448 TRPM2O94759 1503 aa14.88□□□□□ -0.03
TUBA1C-209ENST00000552448 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
TUBA1C-209ENST00000552448 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
TUBA1C-209ENST00000552448 EFCAB6Q5THR3 1501 aa14.87□□□□□ -0.03
TUBA1C-209ENST00000552448 PTPRTO14522 1441 aa14.86□□□□□ -0.03
TUBA1C-209ENST00000552448 REREQ9P2R6 1566 aa14.86□□□□□ -0.03
TUBA1C-209ENST00000552448 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
TUBA1C-209ENST00000552448 ZC3H13Q5T200 1668 aaKnown RBP14.85□□□□□ -0.03
TUBA1C-209ENST00000552448 RGL3Q3MIN7 710 aa14.85□□□□□ -0.03
TUBA1C-209ENST00000552448 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
TUBA1C-209ENST00000552448 CEP152O94986 1710 aa14.84□□□□□ -0.03
TUBA1C-209ENST00000552448 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
TUBA1C-209ENST00000552448 IPO9Q96P70 1041 aaKnown RBP14.84□□□□□ -0.03
TUBA1C-209ENST00000552448 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
TUBA1C-209ENST00000552448 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.04
TUBA1C-209ENST00000552448 ST20-MTHFSA0A0A6YYL1 179 aa14.82□□□□□ -0.04
TUBA1C-209ENST00000552448 USP35Q9P2H5 1018 aa14.82□□□□□ -0.04
TUBA1C-209ENST00000552448 LAMC1P11047 1609 aa14.81□□□□□ -0.04
TUBA1C-209ENST00000552448 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
TUBA1C-209ENST00000552448 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
TUBA1C-209ENST00000552448 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
TUBA1C-209ENST00000552448 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
TUBA1C-209ENST00000552448 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 446.6 ms